Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
15:50:45 (1765574): wrapper (7.7.26015): starting
15:50:45 (1765574): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 15:50:45] Arguments: --nthreads 12
[2025-06-05 15:50:45] Threads: 12
[2025-06-05 15:50:45] Checking for CVMFS
[2025-06-05 15:50:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:50:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:50:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:50:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:50:45] 2.12.7.0 600724 4125 60088 146820 3 56 3899774 4096001 0 130560 0 3238823 99.991 925304 232 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 15:50:45] CVMFS is ok
[2025-06-05 15:50:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:50:45] Checking for apptainer binary...
[2025-06-05 15:50:45] apptainer is not installed, using version from CVMFS
[2025-06-05 15:50:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:50:46] lithium
[2025-06-05 15:50:46] apptainer works
[2025-06-05 15:50:46] Set ATHENA_PROC_NUMBER=12
[2025-06-05 15:50:46] Set ATHENA_CORE_NUMBER=12
[2025-06-05 15:50:46] Starting ATLAS job with PandaID=6678071549
[2025-06-05 15:50:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:19:11]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:19:11] 2025-06-05 15:18:08,529 | INFO     | monitor loop #394: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:08,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:11,034 | INFO     | monitor loop #395: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:11,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:13,419 | INFO     | PID=1769300 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 17:19:11] 2025-06-05 15:18:13,537 | INFO     | monitor loop #396: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:13,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:16,041 | INFO     | monitor loop #397: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:16,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:18,545 | INFO     | monitor loop #398: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:18,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:21,049 | INFO     | monitor loop #399: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:21,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:23,553 | INFO     | monitor loop #400: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:23,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:26,057 | INFO     | monitor loop #401: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:26,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:28,561 | INFO     | monitor loop #402: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:28,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:31,066 | INFO     | monitor loop #403: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:31,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:33,569 | INFO     | monitor loop #404: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:33,570 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:35,572 | INFO     | PID=1769300 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 17:19:11] 2025-06-05 15:18:36,073 | INFO     | monitor loop #405: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:36,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:38,575 | INFO     | monitor loop #406: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:38,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:41,079 | INFO     | monitor loop #407: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:41,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:43,581 | INFO     | monitor loop #408: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:43,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:46,086 | INFO     | monitor loop #409: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:46,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:48,589 | INFO     | monitor loop #410: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:48,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:51,093 | INFO     | monitor loop #411: job 0:6678071549 is in state 'finished'
[2025-06-05 17:19:11] 2025-06-05 15:18:51,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:19:11] 2025-06-05 15:18:51,355 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 17:19:11] 2025-06-05 15:18:51,355 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678071549/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:19:11] 2025-06-05 15:18:51,356 | INFO     | extracted standard info from prmon json
[2025-06-05 17:19:11] 2025-06-05 15:18:51,356 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:19:11] 2025-06-05 15:18:51,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:19:11] 2025-06-05 15:18:51,356 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:19:11] 2025-06-05 15:18:51,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:19:11] 2025-06-05 15:18:51,359 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:19:11] 2025-06-05 15:18:51,359 | INFO     | sum of square deviations: 147126479.5
[2025-06-05 17:19:11] 2025-06-05 15:18:51,360 | INFO     | sum of deviations: -6565613823.500001
[2025-06-05 17:19:11] 2025-06-05 15:18:51,360 | INFO     | mean x: 1749134130.5
[2025-06-05 17:19:11] 2025-06-05 15:18:51,360 | INFO     | mean y: 2744180.1153846155
[2025-06-05 17:19:11] 2025-06-05 15:18:51,360 | INFO     | -- intersect: 78058980320.57477
[2025-06-05 17:19:11] 2025-06-05 15:18:51,361 | INFO     | intersect: 78058980320.57477
[2025-06-05 17:19:11] 2025-06-05 15:18:51,361 | INFO     | chi2: 0.12377391253436094
[2025-06-05 17:19:11] 2025-06-05 15:18:51,361 | INFO     | -- intersect: 78058980320.57477
[2025-06-05 17:19:11] 2025-06-05 15:18:51,362 | INFO     | current memory leak: -44.63 B/s (using 78 data points, chi2=0.12)
[2025-06-05 17:19:11] 2025-06-05 15:18:51,362 | INFO     | ..............................
[2025-06-05 17:19:11] 2025-06-05 15:18:51,363 | INFO     | . Timing measurements:
[2025-06-05 17:19:11] 2025-06-05 15:18:51,363 | INFO     | . get job = 0 s
[2025-06-05 17:19:11] 2025-06-05 15:18:51,363 | INFO     | . initial setup = 1 s
[2025-06-05 17:19:11] 2025-06-05 15:18:51,363 | INFO     | . payload setup = 5 s
[2025-06-05 17:19:11] 2025-06-05 15:18:51,363 | INFO     | . stage-in = 0 s
[2025-06-05 17:19:11] 2025-06-05 15:18:51,363 | INFO     | . payload execution = 5168 s
[2025-06-05 17:19:11] 2025-06-05 15:18:51,363 | INFO     | . stage-out = 0 s
[2025-06-05 17:19:11] 2025-06-05 15:18:51,364 | INFO     | . log creation = 0 s
[2025-06-05 17:19:11] 2025-06-05 15:18:51,364 | INFO     | ..............................
[2025-06-05 17:19:11] 2025-06-05 15:18:51,447 | INFO     | 
[2025-06-05 17:19:11] 2025-06-05 15:18:51,447 | INFO     | job summary report
[2025-06-05 17:19:11] 2025-06-05 15:18:51,447 | INFO     | --------------------------------------------------
[2025-06-05 17:19:11] 2025-06-05 15:18:51,447 | INFO     | PanDA job id: 6678071549
[2025-06-05 17:19:11] 2025-06-05 15:18:51,447 | INFO     | task id: 45006595
[2025-06-05 17:19:11] 2025-06-05 15:18:51,447 | INFO     | errors: (none)
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | pilot state: finished 
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | transexitcode: 0
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | exeerrorcode: 0
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | exeerrordiag: 
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | exitcode: 0
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | exitmsg: OK
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | cpuconsumptiontime: 55764 s
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | nevents: 400
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | neventsw: 0
[2025-06-05 17:19:11] 2025-06-05 15:18:51,448 | INFO     | pid: 1775946
[2025-06-05 17:19:11] 2025-06-05 15:18:51,449 | INFO     | pgrp: 1775946
[2025-06-05 17:19:11] 2025-06-05 15:18:51,449 | INFO     | corecount: 12
[2025-06-05 17:19:11] 2025-06-05 15:18:51,449 | INFO     | event service: False
[2025-06-05 17:19:11] 2025-06-05 15:18:51,449 | INFO     | sizes: {0: 2397178, 1: 2397377, 4: 2397583, 11: 2397611, 5178: 2423922, 5180: 2433061, 5264: 2433175}
[2025-06-05 17:19:11] 2025-06-05 15:18:51,449 | INFO     | --------------------------------------------------
[2025-06-05 17:19:11] 2025-06-05 15:18:51,449 | INFO     | 
[2025-06-05 17:19:11] 2025-06-05 15:18:51,449 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 17:19:11] 2025-06-05 15:18:51,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,465 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,465 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:19:11] 2025-06-05 15:18:51,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:19:11] 2025-06-05 15:18:51,467 | INFO     | job 6678071549 has completed (purged errors)
[2025-06-05 17:19:11] 2025-06-05 15:18:51,467 | INFO     | overall cleanup function is called
[2025-06-05 17:19:11] 2025-06-05 15:18:52,473 | INFO     | --- collectZombieJob: --- 10, [1775946]
[2025-06-05 17:19:11] 2025-06-05 15:18:52,474 | INFO     | zombie collector waiting for pid 1775946
[2025-06-05 17:19:11] 2025-06-05 15:18:52,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:19:11] 2025-06-05 15:18:52,474 | INFO     | collected zombie processes
[2025-06-05 17:19:11] 2025-06-05 15:18:52,474 | INFO     | will attempt to kill all subprocesses of pid=1775946
[2025-06-05 17:19:11] 2025-06-05 15:18:52,561 | INFO     | process IDs to be killed: [1775946] (in reverse order)
[2025-06-05 17:19:11] 2025-06-05 15:18:52,597 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:19:11] 2025-06-05 15:18:52,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:19:11] 2025-06-05 15:18:52,600 | INFO     | did not find any defunct processes belonging to 1775946
[2025-06-05 17:19:11] 2025-06-05 15:18:52,602 | INFO     | did not find any defunct processes belonging to 1775946
[2025-06-05 17:19:11] 2025-06-05 15:18:52,603 | INFO     | ready for new job
[2025-06-05 17:19:11] 2025-06-05 15:18:52,603 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:19:11] 2025-06-05 15:18:52,604 | INFO     | **************************************
[2025-06-05 17:19:11] 2025-06-05 15:18:52,604 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:19:11] 2025-06-05 15:18:52,604 | INFO     | **************************************
[2025-06-05 17:19:11] 2025-06-05 15:18:52,605 | INFO     | 
[2025-06-05 17:19:11] 2025-06-05 15:18:52,626 | INFO     | architecture information:
[2025-06-05 17:19:11] 2025-06-05 15:18:52,627 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:19:11] 2025-06-05 15:18:52,637 | INFO     | cat /etc/os-release:
[2025-06-05 17:19:11] NAME="CentOS Linux"
[2025-06-05 17:19:11] VERSION="7 (Core)"
[2025-06-05 17:19:11] ID="centos"
[2025-06-05 17:19:11] ID_LIKE="rhel fedora"
[2025-06-05 17:19:11] VERSION_ID="7"
[2025-06-05 17:19:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:19:11] ANSI_COLOR="0;31"
[2025-06-05 17:19:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:19:11] HOME_URL="https://www.centos.org/"
[2025-06-05 17:19:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:19:11] 
[2025-06-05 17:19:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:19:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:19:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:19:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:19:11] 
[2025-06-05 17:19:11] 2025-06-05 15:18:52,637 | INFO     | **************************************
[2025-06-05 17:19:11] 2025-06-05 15:18:53,140 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 17:19:11] 2025-06-05 15:18:53,158 | INFO     | sufficient remaining disk space (33535557632 B)
[2025-06-05 17:19:11] 2025-06-05 15:18:53,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:19:11] 2025-06-05 15:18:53,158 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:19:11] 2025-06-05 15:18:53,158 | INFO     | update_server=False
[2025-06-05 17:19:11] 2025-06-05 15:18:53,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:19:11] 2025-06-05 15:18:53,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:19:11] 2025-06-05 15:18:53,170 | INFO     | all job control threads have been joined
[2025-06-05 17:19:11] 2025-06-05 15:18:53,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:19:11] 2025-06-05 15:18:53,597 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 17:19:11] 2025-06-05 15:18:53,597 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 17:19:11] 2025-06-05 15:18:53,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:19:11] 2025-06-05 15:18:53,599 | INFO     | will abort loop
[2025-06-05 17:19:11] 2025-06-05 15:18:53,609 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:19:11] 2025-06-05 15:18:53,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:19:11] 2025-06-05 15:18:53,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:19:11] 2025-06-05 15:18:54,161 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:54,164 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:54,173 | INFO     | [job] control thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:54,181 | INFO     | all data control threads have been joined
[2025-06-05 17:19:11] 2025-06-05 15:18:54,409 | INFO     | all payload control threads have been joined
[2025-06-05 17:19:11] 2025-06-05 15:18:54,604 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:54,693 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:54,817 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:54,921 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:19:11] 2025-06-05 15:18:55,185 | INFO     | [data] control thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:55,217 | INFO     | [job] validate thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:55,257 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:55,326 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:55,361 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:55,414 | INFO     | [payload] control thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:55,425 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:55,489 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:18:58,925 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:19:03,641 | INFO     | job.realtimelogging is not enabled
[2025-06-05 17:19:11] 2025-06-05 15:19:04,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:19:11] 2025-06-05 15:19:06,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434644502336)>', '<ExcThread(monitor, started 140434064000768)>']
[2025-06-05 17:19:11] 2025-06-05 15:19:06,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:19:11] 2025-06-05 15:19:06,665 | INFO     | [monitor] control thread has ended
[2025-06-05 17:19:11] 2025-06-05 15:19:11,491 | INFO     | all workflow threads have been joined
[2025-06-05 17:19:11] 2025-06-05 15:19:11,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:19:11] 2025-06-05 15:19:11,492 | INFO     | traces error code: 0
[2025-06-05 17:19:11] 2025-06-05 15:19:11,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:19:11] 2025-06-05 15:19:11,579 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:19:11] 2025-06-05 15:19:11,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:19:11] 2025-06-05 15:19:11,583 [wrapper] pilotpid: 1769300
[2025-06-05 17:19:11] 2025-06-05 15:19:11,585 [wrapper] Pilot exit status: 0
[2025-06-05 17:19:11] 2025-06-05 15:19:11,592 [wrapper] pandaids: 6678071549
[2025-06-05 17:19:11] 2025-06-05 15:19:11,616 [wrapper] cleanup supervisor_pilot 1787783 1769301
[2025-06-05 17:19:11] 2025-06-05 15:19:11,619 [wrapper] Test setup, not cleaning
[2025-06-05 17:19:11] 2025-06-05 15:19:11,621 [wrapper] apfmon messages muted
[2025-06-05 17:19:11] 2025-06-05 15:19:11,623 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:19:11] 2025-06-05 15:19:11,625 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:19:11]  *** Error codes and diagnostics ***
[2025-06-05 17:19:11]     "exeErrorCode": 0,
[2025-06-05 17:19:11]     "exeErrorDiag": "",
[2025-06-05 17:19:11]     "pilotErrorCode": 0,
[2025-06-05 17:19:11]     "pilotErrorDiag": "",
[2025-06-05 17:19:11]  *** Listing of results directory ***
[2025-06-05 17:19:11] total 390304
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:49 queuedata.json
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-05 17:19:11] -rwx------ 1 boinc boinc     37140 Jun  3 22:51 runpilot2-wrapper.sh
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc       100 Jun  5 15:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:19:11] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 15:50 run_atlas
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc       105 Jun  5 15:50 job.xml
[2025-06-05 17:19:11] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:50 start_atlas.sh
[2025-06-05 17:19:11] drwxrwx--x 2 boinc boinc      4096 Jun  5 15:50 shared
[2025-06-05 17:19:11] -rw-r--r-- 2 boinc boinc    508881 Jun  5 15:50 input.tar.gz
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc      6048 Jun  5 15:50 init_data.xml
[2025-06-05 17:19:11] -rw-r--r-- 2 boinc boinc 218500840 Jun  5 15:50 EVNT.45006593._001818.pool.root.1
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc         0 Jun  5 15:50 boinc_lockfile
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc      2525 Jun  5 15:50 pandaJob.out
[2025-06-05 17:19:11] -rw------- 1 boinc boinc    983210 Jun  5 15:50 agis_schedconf.cvmfs.json
[2025-06-05 17:19:11] -rw------- 1 boinc boinc   1598969 Jun  5 15:50 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:19:11] drwx------ 4 boinc boinc      4096 Jun  5 15:50 pilot3
[2025-06-05 17:19:11] -rw------- 1 boinc boinc 175617482 Jun  5 17:16 HITS.45006595._045318.pool.root.1
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc       530 Jun  5 17:16 boinc_task_state.xml
[2025-06-05 17:19:11] -rw------- 1 boinc boinc      1065 Jun  5 17:17 memory_monitor_summary.json
[2025-06-05 17:19:11] -rw------- 1 boinc boinc    364826 Jun  5 17:17 log.45006595._045318.job.log.tgz.1
[2025-06-05 17:19:11] -rw------- 1 boinc boinc        95 Jun  5 17:18 pilot_heartbeat.json
[2025-06-05 17:19:11] -rw------- 1 boinc boinc      7733 Jun  5 17:18 heartbeat.json
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc        27 Jun  5 17:18 wrapper_checkpoint.txt
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc      8192 Jun  5 17:18 boinc_mmap_file
[2025-06-05 17:19:11] -rw------- 1 boinc boinc      4618 Jun  5 17:19 pilotlog.txt
[2025-06-05 17:19:11] -rw------- 1 boinc boinc    494946 Jun  5 17:19 log.45006595._045318.job.log.1
[2025-06-05 17:19:11] -rw------- 1 boinc boinc       357 Jun  5 17:19 output.list
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc       620 Jun  5 17:19 runtime_log
[2025-06-05 17:19:11] -rw------- 1 boinc boinc    880640 Jun  5 17:19 result.tar.gz
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc      8716 Jun  5 17:19 runtime_log.err
[2025-06-05 17:19:11] -rw------- 1 boinc boinc       653 Jun  5 17:19 FO9KDmKmng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr7lKDmxUpdhn.diag
[2025-06-05 17:19:11] -rw-r--r-- 1 boinc boinc     22153 Jun  5 17:19 stderr.txt
[2025-06-05 17:19:11] HITS file was successfully produced:
[2025-06-05 17:19:11] -rw------- 1 boinc boinc 175617482 Jun  5 17:16 shared/HITS.pool.root.1
[2025-06-05 17:19:11]  *** Contents of shared directory: ***
[2025-06-05 17:19:11] total 386268
[2025-06-05 17:19:11] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:50 start_atlas.sh
[2025-06-05 17:19:11] -rw-r--r-- 2 boinc boinc    508881 Jun  5 15:50 input.tar.gz
[2025-06-05 17:19:11] -rw-r--r-- 2 boinc boinc 218500840 Jun  5 15:50 ATLAS.root_0
[2025-06-05 17:19:11] -rw------- 1 boinc boinc 175617482 Jun  5 17:16 HITS.pool.root.1
[2025-06-05 17:19:11] -rw------- 1 boinc boinc    880640 Jun  5 17:19 result.tar.gz
17:19:13 (1765574): run_atlas exited; CPU time 55669.312187
17:19:13 (1765574): called boinc_finish(0)

</stderr_txt>
]]>

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