Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:17:58 (903293): wrapper (7.7.26015): starting
12:17:58 (903293): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 12:17:58] Arguments: --nthreads 3
[2025-06-05 12:17:58] Threads: 3
[2025-06-05 12:17:58] Checking for CVMFS
[2025-06-05 12:18:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:18:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:18:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:18:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:18:44] 2.11.5.0 903512 0 30968 146804 3 1 44905678 52428800 0 130560 0 0 0.000 1292 57 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 12:18:44] CVMFS is ok
[2025-06-05 12:18:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:18:44] Checking for apptainer binary...
[2025-06-05 12:18:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:18:44] Running /usr/bin/apptainer --version
[2025-06-05 12:18:44] apptainer version 1.3.5-1.el9
[2025-06-05 12:18:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:18:44] testio004
[2025-06-05 12:18:44] apptainer works
[2025-06-05 12:18:44] Set ATHENA_PROC_NUMBER=3
[2025-06-05 12:18:44] Set ATHENA_CORE_NUMBER=3
[2025-06-05 12:18:44] Starting ATLAS job with PandaID=6678071542
[2025-06-05 12:18:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:07:57]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:07:57] 2025-06-05 05:07:46,485 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678071542/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:07:57] 2025-06-05 05:07:46,486 | INFO     | extracted standard info from prmon json
[2025-06-05 14:07:57] 2025-06-05 05:07:46,486 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:07:57] 2025-06-05 05:07:46,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:07:57] 2025-06-05 05:07:46,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:07:57] 2025-06-05 05:07:46,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:07:57] 2025-06-05 05:07:46,487 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:07:57] 2025-06-05 05:07:46,487 | INFO     | sum of square deviations: 338804492.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | sum of deviations: 15541421705.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | mean x: 1749096837.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | mean y: 2333164.155339806
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | -- intersect: -80231111753.38916
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | intersect: -80231111753.38916
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | chi2: 3.6060177787226406
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | sum of deviations: 15391231683.500008
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | mean x: 1749096684.5
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | mean y: 2332676.3163265307
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | -- intersect: -92249661661.67773
[2025-06-05 14:07:57] 2025-06-05 05:07:46,488 | INFO     | intersect: -92249661661.67773
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | chi2: 3.6137916228940914
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | current chi2=3.6137916228940914 (change=-0.21557975163961893 %)
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | right removable region: 97
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | sum of deviations: -5526975943.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | mean x: 1749096989.5
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | mean y: 2401073.1428571427
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | -- intersect: 33130005984.464855
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | intersect: 33130005984.464855
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | chi2: 1.3087827967651462
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | current chi2=1.3087827967651462 (change=63.70559223286036 %)
[2025-06-05 14:07:57] 2025-06-05 05:07:46,489 | INFO     | sum of square deviations: 249388862.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | sum of deviations: -19833120380.999996
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | mean x: 1749097142.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | mean y: 2452513.35483871
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | -- intersect: 139102707020.106
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | intersect: 139102707020.106
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | chi2: 0.23959215067720413
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | current chi2=0.23959215067720413 (change=81.69351314294533 %)
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | sum of square deviations: 211285822.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | sum of deviations: -18173540229.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | mean x: 1749097294.5
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | mean y: 2445567.727272727
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | -- intersect: 150449312968.18542
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | intersect: 150449312968.18542
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | chi2: 0.19976166399242445
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | current chi2=0.19976166399242445 (change=16.62428696941837 %)
[2025-06-05 14:07:57] 2025-06-05 05:07:46,490 | INFO     | left removable region: 30
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | sum of square deviations: 93240818.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | sum of deviations: -5690963890.000001
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | mean x: 1749097569.0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | mean y: 2388287.4029850746
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | -- intersect: 106758756568.79005
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | intersect: 106758756568.79005
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | chi2: 0.14078715002980996
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | -- intersect: 106758756568.79005
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | current memory leak: -61.04 B/s (using 67 data points, chi2=0.14)
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | ..............................
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | . Timing measurements:
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | . get job = 0 s
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | . initial setup = 9 s
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | . payload setup = 6 s
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | . stage-in = 0 s
[2025-06-05 14:07:57] 2025-06-05 05:07:46,491 | INFO     | . payload execution = 6250 s
[2025-06-05 14:07:57] 2025-06-05 05:07:46,492 | INFO     | . stage-out = 0 s
[2025-06-05 14:07:57] 2025-06-05 05:07:46,492 | INFO     | . log creation = 0 s
[2025-06-05 14:07:57] 2025-06-05 05:07:46,492 | INFO     | ..............................
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | 
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | job summary report
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | --------------------------------------------------
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | PanDA job id: 6678071542
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | task id: 45006595
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | errors: (none)
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | pilot state: finished 
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | transexitcode: 0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | exeerrorcode: 0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | exeerrordiag: 
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | exitcode: 0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | exitmsg: OK
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | cpuconsumptiontime: 16557 s
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | nevents: 400
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | neventsw: 0
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | pid: 913845
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | pgrp: 913845
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | corecount: 3
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | event service: False
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | sizes: {0: 2397340, 4: 2397546, 11: 2397574, 6259: 2424294, 6260: 2433291, 6350: 2433405}
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | --------------------------------------------------
[2025-06-05 14:07:57] 2025-06-05 05:07:46,765 | INFO     | 
[2025-06-05 14:07:57] 2025-06-05 05:07:46,766 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-05 14:07:57] 2025-06-05 05:07:46,776 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | job 6678071542 has completed (purged errors)
[2025-06-05 14:07:57] 2025-06-05 05:07:46,777 | INFO     | overall cleanup function is called
[2025-06-05 14:07:57] 2025-06-05 05:07:47,783 | INFO     | --- collectZombieJob: --- 10, [913845]
[2025-06-05 14:07:57] 2025-06-05 05:07:47,783 | INFO     | zombie collector waiting for pid 913845
[2025-06-05 14:07:57] 2025-06-05 05:07:47,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:07:57] 2025-06-05 05:07:47,783 | INFO     | collected zombie processes
[2025-06-05 14:07:57] 2025-06-05 05:07:47,783 | INFO     | will attempt to kill all subprocesses of pid=913845
[2025-06-05 14:07:57] 2025-06-05 05:07:47,813 | INFO     | process IDs to be killed: [913845] (in reverse order)
[2025-06-05 14:07:57] 2025-06-05 05:07:47,831 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:07:57] 2025-06-05 05:07:47,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:07:57] 2025-06-05 05:07:47,833 | INFO     | did not find any defunct processes belonging to 913845
[2025-06-05 14:07:57] 2025-06-05 05:07:47,833 | INFO     | did not find any defunct processes belonging to 913845
[2025-06-05 14:07:57] 2025-06-05 05:07:47,834 | INFO     | ready for new job
[2025-06-05 14:07:57] 2025-06-05 05:07:47,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:07:57] 2025-06-05 05:07:47,835 | INFO     | **************************************
[2025-06-05 14:07:57] 2025-06-05 05:07:47,835 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:07:57] 2025-06-05 05:07:47,835 | INFO     | **************************************
[2025-06-05 14:07:57] 2025-06-05 05:07:47,835 | INFO     | 
[2025-06-05 14:07:57] 2025-06-05 05:07:47,835 | INFO     | architecture information:
[2025-06-05 14:07:57] 2025-06-05 05:07:47,835 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:07:57] 2025-06-05 05:07:47,842 | INFO     | cat /etc/os-release:
[2025-06-05 14:07:57] NAME="CentOS Linux"
[2025-06-05 14:07:57] VERSION="7 (Core)"
[2025-06-05 14:07:57] ID="centos"
[2025-06-05 14:07:57] ID_LIKE="rhel fedora"
[2025-06-05 14:07:57] VERSION_ID="7"
[2025-06-05 14:07:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:07:57] ANSI_COLOR="0;31"
[2025-06-05 14:07:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:07:57] HOME_URL="https://www.centos.org/"
[2025-06-05 14:07:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:07:57] 
[2025-06-05 14:07:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:07:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:07:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:07:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:07:57] 
[2025-06-05 14:07:57] 2025-06-05 05:07:47,842 | INFO     | **************************************
[2025-06-05 14:07:57] 2025-06-05 05:07:48,345 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-05 14:07:57] 2025-06-05 05:07:48,353 | INFO     | sufficient remaining disk space (323805511680 B)
[2025-06-05 14:07:57] 2025-06-05 05:07:48,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:07:57] 2025-06-05 05:07:48,353 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:07:57] 2025-06-05 05:07:48,353 | INFO     | update_server=False
[2025-06-05 14:07:57] 2025-06-05 05:07:48,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:07:57] 2025-06-05 05:07:48,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:07:57] 2025-06-05 05:07:48,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:07:57] 2025-06-05 05:07:48,354 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 14:07:57] 2025-06-05 05:07:48,354 | INFO     | aborting loop
[2025-06-05 14:07:57] 2025-06-05 05:07:48,354 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:07:57] 2025-06-05 05:07:48,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:07:57] 2025-06-05 05:07:48,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:07:57] 2025-06-05 05:07:48,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:07:57] 2025-06-05 05:07:48,836 | INFO     | all data control threads have been joined
[2025-06-05 14:07:57] 2025-06-05 05:07:48,988 | INFO     | all job control threads have been joined
[2025-06-05 14:07:57] 2025-06-05 05:07:49,358 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:49,359 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:49,359 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:49,369 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:49,524 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:49,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:07:57] 2025-06-05 05:07:49,722 | INFO     | all payload control threads have been joined
[2025-06-05 14:07:57] 2025-06-05 05:07:49,733 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:49,841 | INFO     | [data] control thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:49,859 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:49,865 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:49,993 | INFO     | [job] control thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:50,037 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:50,105 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:50,727 | INFO     | [payload] control thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:50,729 | INFO     | [job] validate thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:51,698 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:52,360 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:07:57] 2025-06-05 05:07:52,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140299235403584)>', '<ExcThread(monitor, started 140298889963264)>']
[2025-06-05 14:07:57] 2025-06-05 05:07:53,371 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:07:57] 2025-06-05 05:07:53,371 | INFO     | [monitor] control thread has ended
[2025-06-05 14:07:57] 2025-06-05 05:07:57,780 | INFO     | all workflow threads have been joined
[2025-06-05 14:07:57] 2025-06-05 05:07:57,780 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:07:57] 2025-06-05 05:07:57,780 | INFO     | traces error code: 0
[2025-06-05 14:07:57] 2025-06-05 05:07:57,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:07:57] 2025-06-05 05:07:57,840 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:07:57] 2025-06-05 05:07:57,842 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:07:57] 2025-06-05 05:07:57,843 [wrapper] pilotpid: 907502
[2025-06-05 14:07:57] 2025-06-05 05:07:57,845 [wrapper] Pilot exit status: 0
[2025-06-05 14:07:57] 2025-06-05 05:07:57,851 [wrapper] pandaids: 6678071542
[2025-06-05 14:07:57] 2025-06-05 05:07:57,863 [wrapper] cleanup supervisor_pilot  927785 907503
[2025-06-05 14:07:57] 2025-06-05 05:07:57,864 [wrapper] Test setup, not cleaning
[2025-06-05 14:07:57] 2025-06-05 05:07:57,866 [wrapper] apfmon messages muted
[2025-06-05 14:07:57] 2025-06-05 05:07:57,867 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:07:57] 2025-06-05 05:07:57,869 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:07:57]  *** Error codes and diagnostics ***
[2025-06-05 14:07:57]     "exeErrorCode": 0,
[2025-06-05 14:07:57]     "exeErrorDiag": "",
[2025-06-05 14:07:57]     "pilotErrorCode": 0,
[2025-06-05 14:07:57]     "pilotErrorDiag": "",
[2025-06-05 14:07:57]  *** Listing of results directory ***
[2025-06-05 14:07:57] total 391024
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:49 queuedata.json
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc    495897 Jun  4 05:49 pilot3.tar.gz
[2025-06-05 14:07:57] -rwx------. 1 boinc boinc     37140 Jun  4 05:51 runpilot2-wrapper.sh
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc       100 Jun  5 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:07:57] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 12:17 run_atlas
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc       105 Jun  5 12:17 job.xml
[2025-06-05 14:07:57] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:17 start_atlas.sh
[2025-06-05 14:07:57] drwxrwx--x. 2 boinc boinc        68 Jun  5 12:17 shared
[2025-06-05 14:07:57] -rw-r--r--. 2 boinc boinc    508876 Jun  5 12:17 input.tar.gz
[2025-06-05 14:07:57] -rw-r--r--. 2 boinc boinc 218500840 Jun  5 12:17 EVNT.45006593._001818.pool.root.1
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc         0 Jun  5 12:17 boinc_lockfile
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc      2524 Jun  5 12:18 pandaJob.out
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc    987109 Jun  5 12:21 agis_schedconf.cvmfs.json
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc   1598969 Jun  5 12:21 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:07:57] drwx------. 4 boinc boinc      4096 Jun  5 12:21 pilot3
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc      6513 Jun  5 13:19 init_data.xml
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc 176464710 Jun  5 14:05 HITS.45006595._045311.pool.root.1
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc       529 Jun  5 14:05 boinc_task_state.xml
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc      1010 Jun  5 14:06 memory_monitor_summary.json
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc    226166 Jun  5 14:06 log.45006595._045311.job.log.tgz.1
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc        95 Jun  5 14:07 pilot_heartbeat.json
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc        27 Jun  5 14:07 wrapper_checkpoint.txt
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc      8192 Jun  5 14:07 boinc_mmap_file
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc      7663 Jun  5 14:07 heartbeat.json
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc      4477 Jun  5 14:07 pilotlog.txt
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc    589822 Jun  5 14:07 log.45006595._045311.job.log.1
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc       357 Jun  5 14:07 output.list
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc       620 Jun  5 14:07 runtime_log
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc    829440 Jun  5 14:07 result.tar.gz
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc      8617 Jun  5 14:07 runtime_log.err
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc       643 Jun  5 14:07 E5uKDmKmng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmk7lKDmU0Dm3n.diag
[2025-06-05 14:07:57] -rw-r--r--. 1 boinc boinc     20486 Jun  5 14:07 stderr.txt
[2025-06-05 14:07:57] HITS file was successfully produced:
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc 176464710 Jun  5 14:05 shared/HITS.pool.root.1
[2025-06-05 14:07:57]  *** Contents of shared directory: ***
[2025-06-05 14:07:57] total 387040
[2025-06-05 14:07:57] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:17 start_atlas.sh
[2025-06-05 14:07:57] -rw-r--r--. 2 boinc boinc    508876 Jun  5 12:17 input.tar.gz
[2025-06-05 14:07:57] -rw-r--r--. 2 boinc boinc 218500840 Jun  5 12:17 ATLAS.root_0
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc 176464710 Jun  5 14:05 HITS.pool.root.1
[2025-06-05 14:07:57] -rw-------. 1 boinc boinc    829440 Jun  5 14:07 result.tar.gz
14:07:59 (903293): run_atlas exited; CPU time 16582.112603
14:07:59 (903293): called boinc_finish(0)

</stderr_txt>
]]>

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