Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:55 (4062095): wrapper (7.7.26015): starting
21:45:55 (4062095): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 21:45:55] Arguments: --nthreads 4
[2025-06-05 21:45:55] Threads: 4
[2025-06-05 21:45:55] Checking for CVMFS
[2025-06-05 21:45:55] No cvmfs_config command found, will try listing directly
[2025-06-05 21:45:55] CVMFS is ok
[2025-06-05 21:45:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 21:45:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 21:45:55] Further information can be found at the LHC@home message board.
[2025-06-05 21:45:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 21:45:55] Checking for apptainer binary...
[2025-06-05 21:45:55] which: no apptainer in ((null))
[2025-06-05 21:45:55] apptainer is not installed, using version from CVMFS
[2025-06-05 21:45:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 21:45:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-05 21:45:56] apptainer works
[2025-06-05 21:45:56] Set ATHENA_PROC_NUMBER=4
[2025-06-05 21:45:56] Set ATHENA_CORE_NUMBER=4
[2025-06-05 21:45:56] Starting ATLAS job with PandaID=6677976661
[2025-06-05 21:45:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 00:23:08]  *** The last 200 lines of the pilot log: ***
[2025-06-06 00:23:08] 2025-06-05 22:20:57,657 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4782/.job.ad'
[2025-06-06 00:23:08] 2025-06-05 22:20:57,657 | INFO     | total number of processed events: 400 (read)
[2025-06-06 00:23:08] 2025-06-05 22:20:57,661 | INFO     | executing command: lscpu
[2025-06-06 00:23:08] 2025-06-05 22:20:57,724 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 00:23:08] 2025-06-05 22:20:58,066 | INFO     | monitor loop #677: job 0:6677976661 is in state 'finished'
[2025-06-06 00:23:08] 2025-06-05 22:20:58,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 00:23:08] 2025-06-05 22:21:00,568 | INFO     | monitor loop #678: job 0:6677976661 is in state 'finished'
[2025-06-06 00:23:08] 2025-06-05 22:21:00,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 00:23:08] 2025-06-05 22:21:01,793 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 00:23:08] 2025-06-05 22:21:01,793 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6677976661/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 00:23:08] 2025-06-05 22:21:01,794 | INFO     | extracted standard info from prmon json
[2025-06-06 00:23:08] 2025-06-05 22:21:01,794 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 00:23:08] 2025-06-05 22:21:01,794 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 00:23:08] 2025-06-05 22:21:01,795 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 00:23:08] 2025-06-05 22:21:01,795 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 00:23:08] 2025-06-05 22:21:01,800 | INFO     | fitting pss+swap vs Time
[2025-06-06 00:23:08] 2025-06-05 22:21:01,800 | INFO     | sum of square deviations: 1088905998.0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,801 | INFO     | sum of deviations: 18608687267.000004
[2025-06-06 00:23:08] 2025-06-05 22:21:01,801 | INFO     | mean x: 1749157397.5
[2025-06-06 00:23:08] 2025-06-05 22:21:01,801 | INFO     | mean y: 2304809.210526316
[2025-06-06 00:23:08] 2025-06-05 22:21:01,801 | INFO     | -- intersect: -29889644588.277428
[2025-06-06 00:23:08] 2025-06-05 22:21:01,801 | INFO     | intersect: -29889644588.277428
[2025-06-06 00:23:08] 2025-06-05 22:21:01,802 | INFO     | chi2: 1.8004955063434478
[2025-06-06 00:23:08] 2025-06-05 22:21:01,802 | INFO     | sum of square deviations: 984941258.0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,803 | INFO     | sum of deviations: 18059148515.000004
[2025-06-06 00:23:08] 2025-06-05 22:21:01,803 | INFO     | mean x: 1749157245.0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,803 | INFO     | mean y: 2304002.93877551
[2025-06-06 00:23:08] 2025-06-05 22:21:01,803 | INFO     | -- intersect: -32068939035.13411
[2025-06-06 00:23:08] 2025-06-05 22:21:01,804 | INFO     | intersect: -32068939035.13411
[2025-06-06 00:23:08] 2025-06-05 22:21:01,804 | INFO     | chi2: 1.802876532735778
[2025-06-06 00:23:08] 2025-06-05 22:21:01,804 | INFO     | current chi2=1.802876532735778 (change=-0.13224284003717487 %)
[2025-06-06 00:23:08] 2025-06-05 22:21:01,804 | INFO     | right removable region: 146
[2025-06-06 00:23:08] 2025-06-05 22:21:01,805 | INFO     | sum of square deviations: 984941258.0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,806 | INFO     | sum of deviations: -7442650321.0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,806 | INFO     | mean x: 1749157550.0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,806 | INFO     | mean y: 2342585.0204081633
[2025-06-06 00:23:08] 2025-06-05 22:21:01,806 | INFO     | -- intersect: 13219748085.34627
[2025-06-06 00:23:08] 2025-06-05 22:21:01,806 | INFO     | intersect: 13219748085.34627
[2025-06-06 00:23:08] 2025-06-05 22:21:01,806 | INFO     | chi2: 0.030951869450342027
[2025-06-06 00:23:08] 2025-06-05 22:21:01,807 | INFO     | current chi2=0.030951869450342027 (change=98.28092492642756 %)
[2025-06-06 00:23:08] 2025-06-05 22:21:01,807 | INFO     | sum of square deviations: 887813855.5
[2025-06-06 00:23:08] 2025-06-05 22:21:01,808 | INFO     | sum of deviations: -7127338301.499999
[2025-06-06 00:23:08] 2025-06-05 22:21:01,808 | INFO     | mean x: 1749157702.5
[2025-06-06 00:23:08] 2025-06-05 22:21:01,808 | INFO     | mean y: 2342048.88028169
[2025-06-06 00:23:08] 2025-06-05 22:21:01,808 | INFO     | -- intersect: 14044518357.75406
[2025-06-06 00:23:08] 2025-06-05 22:21:01,808 | INFO     | intersect: 14044518357.75406
[2025-06-06 00:23:08] 2025-06-05 22:21:01,808 | INFO     | chi2: 0.0265101741378749
[2025-06-06 00:23:08] 2025-06-05 22:21:01,809 | INFO     | current chi2=0.0265101741378749 (change=14.350329693633562 %)
[2025-06-06 00:23:08] 2025-06-05 22:21:01,809 | INFO     | left removable region: 20
[2025-06-06 00:23:08] 2025-06-05 22:21:01,809 | INFO     | sum of square deviations: 620244187.5
[2025-06-06 00:23:08] 2025-06-05 22:21:01,810 | INFO     | sum of deviations: -2917412413.0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,810 | INFO     | mean x: 1749157824.5
[2025-06-06 00:23:08] 2025-06-05 22:21:01,810 | INFO     | mean y: 2335293.6507936507
[2025-06-06 00:23:08] 2025-06-05 22:21:01,810 | INFO     | -- intersect: 8229763865.067073
[2025-06-06 00:23:08] 2025-06-05 22:21:01,810 | INFO     | intersect: 8229763865.067073
[2025-06-06 00:23:08] 2025-06-05 22:21:01,810 | INFO     | chi2: 0.01734799094164832
[2025-06-06 00:23:08] 2025-06-05 22:21:01,811 | INFO     | -- intersect: 8229763865.067073
[2025-06-06 00:23:08] 2025-06-05 22:21:01,811 | INFO     | current memory leak: -4.70 B/s (using 126 data points, chi2=0.02)
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | ..............................
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | . Timing measurements:
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | . get job = 0 s
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | . initial setup = 1 s
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | . payload setup = 6 s
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | . stage-in = 0 s
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | . payload execution = 9263 s
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | . stage-out = 0 s
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | . log creation = 0 s
[2025-06-06 00:23:08] 2025-06-05 22:21:01,812 | INFO     | ..............................
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | 
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | job summary report
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | --------------------------------------------------
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | PanDA job id: 6677976661
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | task id: 45006595
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | errors: (none)
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | pilot state: finished 
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | transexitcode: 0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,925 | INFO     | exeerrorcode: 0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,926 | INFO     | exeerrordiag: 
[2025-06-06 00:23:08] 2025-06-05 22:21:01,926 | INFO     | exitcode: 0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,926 | INFO     | exitmsg: OK
[2025-06-06 00:23:08] 2025-06-05 22:21:01,926 | INFO     | cpuconsumptiontime: 35563 s
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | nevents: 400
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | neventsw: 0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | pid: 4073263
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | pgrp: 4073263
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | corecount: 4
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | event service: False
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 11: 2397643, 9274: 2425852, 9276: 2434815, 9277: 2434999, 9281: 2435169}
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | --------------------------------------------------
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | 
[2025-06-06 00:23:08] 2025-06-05 22:21:01,927 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-06 00:23:08] 2025-06-05 22:21:01,948 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,948 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,948 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,948 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,950 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 00:23:08] 2025-06-05 22:21:01,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,950 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 00:23:08] 2025-06-05 22:21:01,950 | INFO     | job 6677976661 has completed (purged errors)
[2025-06-06 00:23:08] 2025-06-05 22:21:01,950 | INFO     | overall cleanup function is called
[2025-06-06 00:23:08] 2025-06-05 22:21:02,953 | INFO     | --- collectZombieJob: --- 10, [4073263]
[2025-06-06 00:23:08] 2025-06-05 22:21:02,953 | INFO     | zombie collector waiting for pid 4073263
[2025-06-06 00:23:08] 2025-06-05 22:21:02,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 00:23:08] 2025-06-05 22:21:02,953 | INFO     | collected zombie processes
[2025-06-06 00:23:08] 2025-06-05 22:21:02,954 | INFO     | will attempt to kill all subprocesses of pid=4073263
[2025-06-06 00:23:08] 2025-06-05 22:21:03,274 | INFO     | process IDs to be killed: [4073263] (in reverse order)
[2025-06-06 00:23:08] 2025-06-05 22:21:03,385 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 00:23:08] 2025-06-05 22:21:03,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 00:23:08] 2025-06-05 22:21:03,398 | INFO     | did not find any defunct processes belonging to 4073263
[2025-06-06 00:23:08] 2025-06-05 22:21:03,409 | INFO     | did not find any defunct processes belonging to 4073263
[2025-06-06 00:23:08] 2025-06-05 22:21:03,409 | INFO     | ready for new job
[2025-06-06 00:23:08] 2025-06-05 22:21:03,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 00:23:08] 2025-06-05 22:21:03,411 | INFO     | **************************************
[2025-06-06 00:23:08] 2025-06-05 22:21:03,412 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 00:23:08] 2025-06-05 22:21:03,412 | INFO     | **************************************
[2025-06-06 00:23:08] 2025-06-05 22:21:03,412 | INFO     | 
[2025-06-06 00:23:08] 2025-06-05 22:21:03,415 | INFO     | architecture information:
[2025-06-06 00:23:08] 2025-06-05 22:21:03,416 | INFO     | executing command: cat /etc/os-release
[2025-06-06 00:23:08] 2025-06-05 22:21:03,431 | INFO     | cat /etc/os-release:
[2025-06-06 00:23:08] NAME="CentOS Linux"
[2025-06-06 00:23:08] VERSION="7 (Core)"
[2025-06-06 00:23:08] ID="centos"
[2025-06-06 00:23:08] ID_LIKE="rhel fedora"
[2025-06-06 00:23:08] VERSION_ID="7"
[2025-06-06 00:23:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 00:23:08] ANSI_COLOR="0;31"
[2025-06-06 00:23:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 00:23:08] HOME_URL="https://www.centos.org/"
[2025-06-06 00:23:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 00:23:08] 
[2025-06-06 00:23:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 00:23:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 00:23:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 00:23:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 00:23:08] 
[2025-06-06 00:23:08] 2025-06-05 22:21:03,431 | INFO     | **************************************
[2025-06-06 00:23:08] 2025-06-05 22:21:03,934 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-06 00:23:08] 2025-06-05 22:21:03,949 | INFO     | sufficient remaining disk space (633162694656 B)
[2025-06-06 00:23:08] 2025-06-05 22:21:03,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 00:23:08] 2025-06-05 22:21:03,950 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 00:23:08] 2025-06-05 22:21:03,950 | INFO     | update_server=False
[2025-06-06 00:23:08] 2025-06-05 22:21:03,950 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 00:23:08] 2025-06-05 22:21:03,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 00:23:08] 2025-06-05 22:21:04,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:23:08] 2025-06-05 22:21:04,076 | INFO     | aborting loop
[2025-06-06 00:23:08] 2025-06-05 22:21:04,272 | INFO     | all payload control threads have been joined
[2025-06-06 00:23:08] 2025-06-05 22:21:04,727 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 00:23:08] 2025-06-05 22:21:04,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 00:23:08] 2025-06-05 22:21:04,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 00:23:08] 2025-06-05 22:21:04,773 | INFO     | all data control threads have been joined
[2025-06-06 00:23:08] 2025-06-05 22:21:04,955 | INFO     | [job] retrieve thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:05,077 | INFO     | [job] job monitor thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:05,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 00:23:08] 2025-06-05 22:21:05,277 | INFO     | [payload] control thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:05,577 | INFO     | all job control threads have been joined
[2025-06-06 00:23:08] 2025-06-05 22:21:05,702 | INFO     | [job] validate thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:05,734 | INFO     | [payload] validate_post thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:05,778 | INFO     | [data] control thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:05,861 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:05,973 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:06,032 | INFO     | [data] copytool_in thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:06,202 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:06,443 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:06,519 | INFO     | [payload] failed_post thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:06,582 | INFO     | [job] control thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:06,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:23:08] 2025-06-05 22:21:07,109 | INFO     | [data] copytool_out thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:07,940 | INFO     | [job] queue monitor thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:07,956 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 00:23:08] 2025-06-05 22:21:08,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22524184127296)>', '<ExcThread(monitor, started 22523609601792)>']
[2025-06-06 00:23:08] 2025-06-05 22:21:08,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 00:23:08] 2025-06-05 22:21:08,748 | INFO     | [monitor] control thread has ended
[2025-06-06 00:23:08] 2025-06-05 22:21:13,297 | INFO     | all workflow threads have been joined
[2025-06-06 00:23:08] 2025-06-05 22:21:13,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 00:23:08] 2025-06-05 22:21:13,297 | INFO     | traces error code: 0
[2025-06-06 00:23:08] 2025-06-05 22:21:13,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 00:23:08] 2025-06-05 22:21:13,440 [wrapper] ==== pilot stdout END ====
[2025-06-06 00:23:08] 2025-06-05 22:21:13,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 00:23:08] 2025-06-05 22:21:13,446 [wrapper] pilotpid: 4065855
[2025-06-06 00:23:08] 2025-06-05 22:21:13,449 [wrapper] Pilot exit status: 0
[2025-06-06 00:23:08] 2025-06-05 22:21:13,459 [wrapper] pandaids: 6677976661
[2025-06-06 00:23:08] 2025-06-05 22:21:13,527 [wrapper] cleanup supervisor_pilot  136872 4065856
[2025-06-06 00:23:08] 2025-06-05 22:21:13,530 [wrapper] Test setup, not cleaning
[2025-06-06 00:23:08] 2025-06-05 22:21:13,532 [wrapper] apfmon messages muted
[2025-06-06 00:23:08] 2025-06-05 22:21:13,535 [wrapper] ==== wrapper stdout END ====
[2025-06-06 00:23:08] 2025-06-05 22:21:13,537 [wrapper] ==== wrapper stderr END ====
[2025-06-06 00:23:08]  *** Error codes and diagnostics ***
[2025-06-06 00:23:08]     "exeErrorCode": 0,
[2025-06-06 00:23:08]     "exeErrorDiag": "",
[2025-06-06 00:23:08]     "pilotErrorCode": 0,
[2025-06-06 00:23:08]     "pilotErrorDiag": "",
[2025-06-06 00:23:08]  *** Listing of results directory ***
[2025-06-06 00:23:08] total 392892
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-06 00:23:08] -rwx------ 1 boinc boinc     37140 Jun  3 21:10 runpilot2-wrapper.sh
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:10 queuedata.json
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc       100 Jun  5 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 00:23:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 21:45 run_atlas
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc       105 Jun  5 21:45 job.xml
[2025-06-06 00:23:08] -rw-r--r-- 2 boinc boinc 217944352 Jun  5 21:45 EVNT.45006593._001739.pool.root.1
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc      6633 Jun  5 21:45 init_data.xml
[2025-06-06 00:23:08] -rw-r--r-- 2 boinc boinc     15093 Jun  5 21:45 start_atlas.sh
[2025-06-06 00:23:08] drwxrwx--x 2 boinc boinc      4096 Jun  5 21:45 shared
[2025-06-06 00:23:08] -rw-r--r-- 2 boinc boinc    508880 Jun  5 21:45 input.tar.gz
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc         0 Jun  5 21:45 boinc_lockfile
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc      2525 Jun  5 21:45 pandaJob.out
[2025-06-06 00:23:08] -rw------- 1 boinc boinc    987599 Jun  5 21:46 agis_schedconf.cvmfs.json
[2025-06-06 00:23:08] -rw------- 1 boinc boinc   1598969 Jun  5 21:46 agis_ddmendpoints.agis.ALL.json
[2025-06-06 00:23:08] drwx------ 4 boinc boinc      4096 Jun  5 21:46 pilot3
[2025-06-06 00:23:08] -rw------- 1 boinc boinc 178181260 Jun  6 00:20 HITS.45006595._043387.pool.root.1
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc       529 Jun  6 00:20 boinc_task_state.xml
[2025-06-06 00:23:08] -rw------- 1 boinc boinc        95 Jun  6 00:20 pilot_heartbeat.json
[2025-06-06 00:23:08] -rw------- 1 boinc boinc      1034 Jun  6 00:20 memory_monitor_summary.json
[2025-06-06 00:23:08] -rw------- 1 boinc boinc    293622 Jun  6 00:20 log.45006595._043387.job.log.tgz.1
[2025-06-06 00:23:08] -rw------- 1 boinc boinc      7718 Jun  6 00:21 heartbeat.json
[2025-06-06 00:23:08] -rw------- 1 boinc boinc      4363 Jun  6 00:21 pilotlog.txt
[2025-06-06 00:23:08] -rw------- 1 boinc boinc    880885 Jun  6 00:21 log.45006595._043387.job.log.1
[2025-06-06 00:23:08] -rw------- 1 boinc boinc       357 Jun  6 00:21 output.list
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc       620 Jun  6 00:21 runtime_log
[2025-06-06 00:23:08] -rw------- 1 boinc boinc   1198080 Jun  6 00:21 result.tar.gz
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc      9025 Jun  6 00:21 runtime_log.err
[2025-06-06 00:23:08] -rw------- 1 boinc boinc       662 Jun  6 00:21 JRFKDmSDmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmchZKDmvsUXun.diag
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc        26 Jun  6 00:23 wrapper_checkpoint.txt
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc      8192 Jun  6 00:23 boinc_mmap_file
[2025-06-06 00:23:08] -rw-r--r-- 1 boinc boinc     20953 Jun  6 00:23 stderr.txt
[2025-06-06 00:23:08] HITS file was successfully produced:
[2025-06-06 00:23:08] -rw------- 1 boinc boinc 178181260 Jun  6 00:20 shared/HITS.pool.root.1
[2025-06-06 00:23:08]  *** Contents of shared directory: ***
[2025-06-06 00:23:08] total 388544
[2025-06-06 00:23:08] -rw-r--r-- 2 boinc boinc 217944352 Jun  5 21:45 ATLAS.root_0
[2025-06-06 00:23:08] -rw-r--r-- 2 boinc boinc     15093 Jun  5 21:45 start_atlas.sh
[2025-06-06 00:23:08] -rw-r--r-- 2 boinc boinc    508880 Jun  5 21:45 input.tar.gz
[2025-06-06 00:23:08] -rw------- 1 boinc boinc 178181260 Jun  6 00:20 HITS.pool.root.1
[2025-06-06 00:23:08] -rw------- 1 boinc boinc   1198080 Jun  6 00:21 result.tar.gz
00:23:09 (4062095): run_atlas exited; CPU time 35940.326168
00:23:09 (4062095): called boinc_finish(0)

</stderr_txt>
]]>

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