Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:23:21 (19323): wrapper (7.7.26015): starting
12:23:21 (19323): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:23:21] Arguments: --nthreads 8
[2025-06-04 12:23:21] Threads: 8
[2025-06-04 12:23:21] Checking for CVMFS
[2025-06-04 12:23:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:23:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:23:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:23:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:23:25] 2.11.2.0 31726 33083 89772 146775 0 146 15994319 25165825 3746 130560 0 17106073 99.750 20701684 1988 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 12:23:25] CVMFS is ok
[2025-06-04 12:23:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:23:25] Checking for apptainer binary...
[2025-06-04 12:23:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:23:25] Running /usr/bin/apptainer --version
[2025-06-04 12:23:25] apptainer version 1.3.2-1.el7
[2025-06-04 12:23:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:34:40] cg-vwn427.simple-grid.lan
[2025-06-04 12:34:40] apptainer works
[2025-06-04 12:34:40] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:34:40] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:34:40] Starting ATLAS job with PandaID=6678072194
[2025-06-04 12:34:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:41:53]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:41:53] 2025-06-04 14:35:33,741 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:41:53] 2025-06-04 14:35:33,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:41:53] 2025-06-04 14:35:33,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:41:53] 2025-06-04 14:35:33,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:41:53] 2025-06-04 14:35:33,746 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:41:53] 2025-06-04 14:35:33,747 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 16:41:53] 2025-06-04 14:35:33,748 | INFO     | sum of deviations: 51644307542.50002
[2025-06-04 16:41:53] 2025-06-04 14:35:33,749 | INFO     | mean x: 1749040763.5
[2025-06-04 16:41:53] 2025-06-04 14:35:33,749 | INFO     | mean y: 2438074.4380530976
[2025-06-04 16:41:53] 2025-06-04 14:35:33,749 | INFO     | -- intersect: -25233947352.266693
[2025-06-04 16:41:53] 2025-06-04 14:35:33,749 | INFO     | intersect: -25233947352.266693
[2025-06-04 16:41:53] 2025-06-04 14:35:33,749 | INFO     | chi2: 5.526690361184809
[2025-06-04 16:41:53] 2025-06-04 14:35:33,750 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,758 | INFO     | sum of deviations: 65225945251.00001
[2025-06-04 16:41:53] 2025-06-04 14:35:33,758 | INFO     | mean x: 1749040611.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,758 | INFO     | mean y: 2446813.773755656
[2025-06-04 16:41:53] 2025-06-04 14:35:33,758 | INFO     | -- intersect: -34083386991.44106
[2025-06-04 16:41:53] 2025-06-04 14:35:33,758 | INFO     | intersect: -34083386991.44106
[2025-06-04 16:41:53] 2025-06-04 14:35:33,759 | INFO     | chi2: 4.803808711288008
[2025-06-04 16:41:53] 2025-06-04 14:35:33,759 | INFO     | current chi2=4.803808711288008 (change=13.079829023419896 %)
[2025-06-04 16:41:53] 2025-06-04 14:35:33,759 | INFO     | right removable region: 220
[2025-06-04 16:41:53] 2025-06-04 14:35:33,760 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,761 | INFO     | sum of deviations: -22268139182.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,762 | INFO     | mean x: 1749040916.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,762 | INFO     | mean y: 2486500.9457013574
[2025-06-04 16:41:53] 2025-06-04 14:35:33,762 | INFO     | -- intersect: 11639392961.22767
[2025-06-04 16:41:53] 2025-06-04 14:35:33,762 | INFO     | intersect: 11639392961.22767
[2025-06-04 16:41:53] 2025-06-04 14:35:33,762 | INFO     | chi2: 1.242690180544729
[2025-06-04 16:41:53] 2025-06-04 14:35:33,762 | INFO     | current chi2=1.242690180544729 (change=77.51474934668998 %)
[2025-06-04 16:41:53] 2025-06-04 14:35:33,763 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,764 | INFO     | sum of deviations: -37052121691.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,765 | INFO     | mean x: 1749041068.5
[2025-06-04 16:41:53] 2025-06-04 14:35:33,765 | INFO     | mean y: 2496542.2685185187
[2025-06-04 16:41:53] 2025-06-04 14:35:33,765 | INFO     | -- intersect: 20741253399.94081
[2025-06-04 16:41:53] 2025-06-04 14:35:33,765 | INFO     | intersect: 20741253399.94081
[2025-06-04 16:41:53] 2025-06-04 14:35:33,765 | INFO     | chi2: 0.9220946207133655
[2025-06-04 16:41:53] 2025-06-04 14:35:33,765 | INFO     | current chi2=0.9220946207133655 (change=25.798510751153724 %)
[2025-06-04 16:41:53] 2025-06-04 14:35:33,766 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,767 | INFO     | sum of deviations: -29961587159.999992
[2025-06-04 16:41:53] 2025-06-04 14:35:33,767 | INFO     | mean x: 1749041221.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,768 | INFO     | mean y: 2491437.075829384
[2025-06-04 16:41:53] 2025-06-04 14:35:33,768 | INFO     | -- intersect: 17993223084.692444
[2025-06-04 16:41:53] 2025-06-04 14:35:33,768 | INFO     | intersect: 17993223084.692444
[2025-06-04 16:41:53] 2025-06-04 14:35:33,768 | INFO     | chi2: 0.9023028786210618
[2025-06-04 16:41:53] 2025-06-04 14:35:33,768 | INFO     | current chi2=0.9023028786210618 (change=2.1463894970986828 %)
[2025-06-04 16:41:53] 2025-06-04 14:35:33,768 | INFO     | left removable region: 30
[2025-06-04 16:41:53] 2025-06-04 14:35:33,769 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 16:41:53] 2025-06-04 14:35:33,770 | INFO     | sum of deviations: 3036237729.0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,770 | INFO     | mean x: 1749041495.5
[2025-06-04 16:41:53] 2025-06-04 14:35:33,770 | INFO     | mean y: 2486805.442105263
[2025-06-04 16:41:53] 2025-06-04 14:35:33,770 | INFO     | -- intersect: -2494456544.956285
[2025-06-04 16:41:53] 2025-06-04 14:35:33,771 | INFO     | intersect: -2494456544.956285
[2025-06-04 16:41:53] 2025-06-04 14:35:33,771 | INFO     | chi2: 0.00011028791393895117
[2025-06-04 16:41:53] 2025-06-04 14:35:33,771 | INFO     | -- intersect: -2494456544.956285
[2025-06-04 16:41:53] 2025-06-04 14:35:33,771 | INFO     | current memory leak: 1.43 B/s (using 190 data points, chi2=0.00)
[2025-06-04 16:41:53] 2025-06-04 14:35:33,772 | INFO     | ..............................
[2025-06-04 16:41:53] 2025-06-04 14:35:33,772 | INFO     | . Timing measurements:
[2025-06-04 16:41:53] 2025-06-04 14:35:33,772 | INFO     | . get job = 0 s
[2025-06-04 16:41:53] 2025-06-04 14:35:33,779 | INFO     | . initial setup = 4 s
[2025-06-04 16:41:53] 2025-06-04 14:35:33,779 | INFO     | . payload setup = 143 s
[2025-06-04 16:41:53] 2025-06-04 14:35:33,779 | INFO     | . stage-in = 0 s
[2025-06-04 16:41:53] 2025-06-04 14:35:33,779 | INFO     | . payload execution = 13880 s
[2025-06-04 16:41:53] 2025-06-04 14:35:33,779 | INFO     | . stage-out = 3 s
[2025-06-04 16:41:53] 2025-06-04 14:35:33,779 | INFO     | . log creation = 0 s
[2025-06-04 16:41:53] 2025-06-04 14:35:33,779 | INFO     | ..............................
[2025-06-04 16:41:53] 2025-06-04 14:35:33,973 | INFO     | 
[2025-06-04 16:41:53] 2025-06-04 14:35:33,973 | INFO     | job summary report
[2025-06-04 16:41:53] 2025-06-04 14:35:33,973 | INFO     | --------------------------------------------------
[2025-06-04 16:41:53] 2025-06-04 14:35:33,973 | INFO     | PanDA job id: 6678072194
[2025-06-04 16:41:53] 2025-06-04 14:35:33,973 | INFO     | task id: 45006595
[2025-06-04 16:41:53] 2025-06-04 14:35:33,973 | INFO     | errors: (none)
[2025-06-04 16:41:53] 2025-06-04 14:35:33,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:41:53] 2025-06-04 14:35:33,974 | INFO     | pilot state: finished 
[2025-06-04 16:41:53] 2025-06-04 14:35:33,974 | INFO     | transexitcode: 0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,974 | INFO     | exeerrorcode: 0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,974 | INFO     | exeerrordiag: 
[2025-06-04 16:41:53] 2025-06-04 14:35:33,974 | INFO     | exitcode: 0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,974 | INFO     | exitmsg: OK
[2025-06-04 16:41:53] 2025-06-04 14:35:33,974 | INFO     | cpuconsumptiontime: 49561 s
[2025-06-04 16:41:53] 2025-06-04 14:35:33,974 | INFO     | nevents: 400
[2025-06-04 16:41:53] 2025-06-04 14:35:33,974 | INFO     | neventsw: 0
[2025-06-04 16:41:53] 2025-06-04 14:35:33,975 | INFO     | pid: 10425
[2025-06-04 16:41:53] 2025-06-04 14:35:33,975 | INFO     | pgrp: 10425
[2025-06-04 16:41:53] 2025-06-04 14:35:33,975 | INFO     | corecount: 8
[2025-06-04 16:41:53] 2025-06-04 14:35:33,975 | INFO     | event service: False
[2025-06-04 16:41:53] 2025-06-04 14:35:33,975 | INFO     | sizes: {0: 2405012, 1: 2405211, 12: 2405211, 23: 2405239, 33: 2405267, 44: 2405323, 55: 2405479, 66: 2405507, 76: 2405535, 86: 2405797, 87: 2405825, 14027: 2435817
[2025-06-04 16:41:53] 2025-06-04 14:35:33,975 | INFO     | --------------------------------------------------
[2025-06-04 16:41:53] 2025-06-04 14:35:33,975 | INFO     | 
[2025-06-04 16:41:53] 2025-06-04 14:35:33,975 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-06-04 16:41:53] 2025-06-04 14:35:34,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:41:53] 2025-06-04 14:35:34,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:41:53] 2025-06-04 14:35:34,543 | INFO     | job 6678072194 has completed (purged errors)
[2025-06-04 16:41:53] 2025-06-04 14:35:34,543 | INFO     | overall cleanup function is called
[2025-06-04 16:41:53] 2025-06-04 14:35:35,552 | INFO     | --- collectZombieJob: --- 10, [10425]
[2025-06-04 16:41:53] 2025-06-04 14:35:35,553 | INFO     | zombie collector waiting for pid 10425
[2025-06-04 16:41:53] 2025-06-04 14:35:35,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:41:53] 2025-06-04 14:35:35,553 | INFO     | collected zombie processes
[2025-06-04 16:41:53] 2025-06-04 14:35:35,553 | INFO     | will attempt to kill all subprocesses of pid=10425
[2025-06-04 16:41:53] 2025-06-04 14:35:35,685 | INFO     | process IDs to be killed: [10425] (in reverse order)
[2025-06-04 16:41:53] 2025-06-04 14:35:36,300 | INFO     | PID=1400 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 16:41:53] 2025-06-04 14:35:36,301 | INFO     | .. there are 9 such processes running
[2025-06-04 16:41:53] 2025-06-04 14:35:36,606 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:41:53] 2025-06-04 14:35:36,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:41:53] 2025-06-04 14:35:36,610 | INFO     | did not find any defunct processes belonging to 10425
[2025-06-04 16:41:53] 2025-06-04 14:35:36,613 | INFO     | did not find any defunct processes belonging to 10425
[2025-06-04 16:41:53] 2025-06-04 14:35:36,614 | INFO     | ready for new job
[2025-06-04 16:41:53] 2025-06-04 14:35:36,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:41:53] 2025-06-04 14:35:36,616 | INFO     | **************************************
[2025-06-04 16:41:53] 2025-06-04 14:35:36,616 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:41:53] 2025-06-04 14:35:36,616 | INFO     | **************************************
[2025-06-04 16:41:53] 2025-06-04 14:35:36,617 | INFO     | 
[2025-06-04 16:41:53] 2025-06-04 14:35:36,617 | INFO     | pilot is running in a VM
[2025-06-04 16:41:53] 2025-06-04 14:35:36,622 | INFO     | architecture information:
[2025-06-04 16:41:53] 2025-06-04 14:35:36,632 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:41:53] 2025-06-04 14:35:36,911 | INFO     | cat /etc/os-release:
[2025-06-04 16:41:53] NAME="CentOS Linux"
[2025-06-04 16:41:53] VERSION="7 (Core)"
[2025-06-04 16:41:53] ID="centos"
[2025-06-04 16:41:53] ID_LIKE="rhel fedora"
[2025-06-04 16:41:53] VERSION_ID="7"
[2025-06-04 16:41:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:41:53] ANSI_COLOR="0;31"
[2025-06-04 16:41:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:41:53] HOME_URL="https://www.centos.org/"
[2025-06-04 16:41:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:41:53] 
[2025-06-04 16:41:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:41:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:41:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:41:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:41:53] 
[2025-06-04 16:41:53] 2025-06-04 14:35:36,912 | INFO     | **************************************
[2025-06-04 16:41:53] 2025-06-04 14:35:37,415 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-06-04 16:41:53] 2025-06-04 14:35:37,607 | INFO     | sufficient remaining disk space (496354983936 B)
[2025-06-04 16:41:53] 2025-06-04 14:35:37,608 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:41:53] 2025-06-04 14:35:37,608 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:41:53] 2025-06-04 14:35:37,608 | INFO     | update_server=False
[2025-06-04 16:41:53] 2025-06-04 14:35:37,608 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:41:53] 2025-06-04 14:35:37,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:41:53] 2025-06-04 14:35:37,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:41:53] 2025-06-04 14:35:37,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:41:53] 2025-06-04 14:35:37,938 | INFO     | aborting loop
[2025-06-04 16:41:53] 2025-06-04 14:35:38,084 | INFO     | all payload control threads have been joined
[2025-06-04 16:41:53] 2025-06-04 14:35:38,308 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:41:53] 2025-06-04 14:35:38,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:41:53] 2025-06-04 14:35:38,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:41:53] 2025-06-04 14:35:38,618 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:38,671 | INFO     | all data control threads have been joined
[2025-06-04 16:41:53] 2025-06-04 14:35:38,704 | INFO     | all job control threads have been joined
[2025-06-04 16:41:53] 2025-06-04 14:35:38,944 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:38,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:41:53] 2025-06-04 14:35:39,091 | INFO     | [payload] control thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,206 | INFO     | [job] validate thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,216 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,218 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,619 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,678 | INFO     | [data] control thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,709 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,709 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,711 | INFO     | [job] control thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,721 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,897 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,951 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:39,993 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:41,617 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:41:53] 2025-06-04 14:35:42,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238670726976)>', '<ExcThread(monitor, started 140238215157504)>']
[2025-06-04 16:41:53] 2025-06-04 14:35:43,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:41:53] 2025-06-04 14:35:43,338 | INFO     | [monitor] control thread has ended
[2025-06-04 16:41:53] 2025-06-04 14:35:47,435 | INFO     | all workflow threads have been joined
[2025-06-04 16:41:53] 2025-06-04 14:35:47,436 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:41:53] 2025-06-04 14:35:47,436 | INFO     | traces error code: 0
[2025-06-04 16:41:53] 2025-06-04 14:35:47,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:41:53] 2025-06-04 14:35:47,867 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:41:53] 2025-06-04 14:35:47,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:41:53] 2025-06-04 14:35:48,089 [wrapper] pilotpid: 1400
[2025-06-04 16:41:53] 2025-06-04 14:35:48,124 [wrapper] Pilot exit status: 0
[2025-06-04 16:41:53] 2025-06-04 14:35:48,554 [wrapper] pandaids: 6678072194
[2025-06-04 16:41:53] 2025-06-04 14:35:49,356 [wrapper] cleanup supervisor_pilot  9118 1401
[2025-06-04 16:41:53] 2025-06-04 14:35:49,428 [wrapper] Test setup, not cleaning
[2025-06-04 16:41:53] 2025-06-04 14:35:49,579 [wrapper] apfmon messages muted
[2025-06-04 16:41:53] 2025-06-04 14:35:49,697 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:41:53] 2025-06-04 14:35:49,783 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:41:53]  *** Error codes and diagnostics ***
[2025-06-04 16:41:53]     "exeErrorCode": 0,
[2025-06-04 16:41:53]     "exeErrorDiag": "",
[2025-06-04 16:41:53]     "pilotErrorCode": 0,
[2025-06-04 16:41:53]     "pilotErrorDiag": "",
[2025-06-04 16:41:53]  *** Listing of results directory ***
[2025-06-04 16:41:53] total 389740
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:55 queuedata.json
[2025-06-04 16:41:53] -rwx------. 1 boinc boinc     37140 Jun  3 22:56 runpilot2-wrapper.sh
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc       100 Jun  4 12:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:41:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 12:23 run_atlas
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc       105 Jun  4 12:23 job.xml
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc      6392 Jun  4 12:23 init_data.xml
[2025-06-04 16:41:53] -rw-r--r--. 2 boinc boinc 216656810 Jun  4 12:23 EVNT.45006593._001826.pool.root.1
[2025-06-04 16:41:53] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:23 start_atlas.sh
[2025-06-04 16:41:53] drwxrwx--x. 2 boinc boinc        68 Jun  4 12:23 shared
[2025-06-04 16:41:53] -rw-r--r--. 2 boinc boinc    508883 Jun  4 12:23 input.tar.gz
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc         0 Jun  4 12:23 boinc_lockfile
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc      2524 Jun  4 12:34 pandaJob.out
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc    986812 Jun  4 12:37 agis_schedconf.cvmfs.json
[2025-06-04 16:41:53] drwx------. 4 boinc boinc      4096 Jun  4 12:37 pilot3
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc 175429079 Jun  4 16:32 HITS.45006595._045513.pool.root.1
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc       530 Jun  4 16:33 boinc_task_state.xml
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc      1015 Jun  4 16:33 memory_monitor_summary.json
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc   1598969 Jun  4 16:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc    372238 Jun  4 16:34 log.45006595._045513.job.log.tgz.1
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc        95 Jun  4 16:35 pilot_heartbeat.json
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc      7686 Jun  4 16:35 heartbeat.json
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc      4417 Jun  4 16:35 pilotlog.txt
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc   1222404 Jun  4 16:35 log.45006595._045513.job.log.1
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc       357 Jun  4 16:35 output.list
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:35 runtime_log
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc   1617920 Jun  4 16:35 result.tar.gz
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc      8673 Jun  4 16:35 runtime_log.err
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc       657 Jun  4 16:35 IUBMDmNrng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4AmKDmdHq6Dm.diag
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc      8192 Jun  4 16:41 boinc_mmap_file
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc        28 Jun  4 16:41 wrapper_checkpoint.txt
[2025-06-04 16:41:53] -rw-r--r--. 1 boinc boinc     20587 Jun  4 16:41 stderr.txt
[2025-06-04 16:41:53] HITS file was successfully produced:
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc 175429079 Jun  4 16:32 shared/HITS.pool.root.1
[2025-06-04 16:41:53]  *** Contents of shared directory: ***
[2025-06-04 16:41:53] total 384996
[2025-06-04 16:41:53] -rw-r--r--. 2 boinc boinc 216656810 Jun  4 12:23 ATLAS.root_0
[2025-06-04 16:41:53] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:23 start_atlas.sh
[2025-06-04 16:41:53] -rw-r--r--. 2 boinc boinc    508883 Jun  4 12:23 input.tar.gz
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc 175429079 Jun  4 16:32 HITS.pool.root.1
[2025-06-04 16:41:53] -rw-------. 1 boinc boinc   1617920 Jun  4 16:35 result.tar.gz
16:41:54 (19323): run_atlas exited; CPU time 49765.487191
16:41:54 (19323): called boinc_finish(0)

</stderr_txt>
]]>

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