Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:13:37 (1141710): wrapper (7.7.26015): starting
12:13:37 (1141710): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 12:13:37] Arguments: --nthreads 3
[2025-06-04 12:13:37] Threads: 3
[2025-06-04 12:13:37] Checking for CVMFS
[2025-06-04 12:13:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:13:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:13:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:13:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:13:37] 2.9.2.0 350883 2323 83172 146775 3 56 31436451 36864001 0 130560 0 2133934 99.993 595934 40525 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 12:13:37] CVMFS is ok
[2025-06-04 12:13:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:13:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:13:37] Further information can be found at the LHC@home message board.
[2025-06-04 12:13:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:13:37] Checking for apptainer binary...
[2025-06-04 12:13:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:13:37] Running /usr/bin/apptainer --version
[2025-06-04 12:13:37] apptainer version 1.3.6-6.1
[2025-06-04 12:13:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:13:37] thA335a
[2025-06-04 12:13:37] apptainer works
[2025-06-04 12:13:37] Set ATHENA_PROC_NUMBER=3
[2025-06-04 12:13:37] Set ATHENA_CORE_NUMBER=3
[2025-06-04 12:13:37] Starting ATLAS job with PandaID=6678071462
[2025-06-04 12:13:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:28:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:28:41]  filetype=log
[2025-06-04 13:28:41]  guid=0f262c03-017d-4230-97a0-447a5fe2d557
[2025-06-04 13:28:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 13:28:41]  is_altstaged=None
[2025-06-04 13:28:41]  is_tar=False
[2025-06-04 13:28:41]  lfn=log.45006595._045231.job.log.tgz.1
[2025-06-04 13:28:41]  mtime=0
[2025-06-04 13:28:41]  protocol_id=None
[2025-06-04 13:28:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:28:41]  replicas=None
[2025-06-04 13:28:41]  scope=mc23_13p6TeV
[2025-06-04 13:28:41]  status=None
[2025-06-04 13:28:41]  status_code=0
[2025-06-04 13:28:41]  storage_token=
[2025-06-04 13:28:41]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678071462/log.45006595._045231.job.log.tgz.1
[2025-06-04 13:28:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/12/log.45006595._045231.job.log.tgz.1
[2025-06-04 13:28:41]  workdir=None
[2025-06-04 13:28:41] ]
[2025-06-04 13:28:41] 2025-06-04 11:28:19,215 | INFO     | transferring file log.45006595._045231.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678071462/log.45006595._045231.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 13:28:41] 2025-06-04 11:28:19,215 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678071462/log.45006595._045231.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0452
[2025-06-04 13:28:41] 2025-06-04 11:28:19,229 | INFO     | adding to output.list: log.45006595._045231.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/12/log.45006595._045231.job.log.tg
[2025-06-04 13:28:41] 2025-06-04 11:28:19,229 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:28:41] 2025-06-04 11:28:19,229 | INFO     | summary of transferred files:
[2025-06-04 13:28:41] 2025-06-04 11:28:19,229 | INFO     |  -- lfn=log.45006595._045231.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:28:41] 2025-06-04 11:28:19,230 | INFO     | stage-out finished correctly
[2025-06-04 13:28:41] 2025-06-04 11:28:20,371 | INFO     | monitor loop #347: job 0:6678071462 is in state 'finished'
[2025-06-04 13:28:41] 2025-06-04 11:28:20,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:28:41] 2025-06-04 11:28:21,031 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:28:41] 2025-06-04 11:28:22,875 | INFO     | monitor loop #348: job 0:6678071462 is in state 'finished'
[2025-06-04 13:28:41] 2025-06-04 11:28:22,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:28:41] 2025-06-04 11:28:23,142 | INFO     | job 6678071462 has state=finished
[2025-06-04 13:28:41] 2025-06-04 11:28:23,142 | INFO     | preparing for final server update for job 6678071462 in state='finished'
[2025-06-04 13:28:41] 2025-06-04 11:28:23,143 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:28:41] 2025-06-04 11:28:23,143 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:28:41] 2025-06-04 11:28:23,143 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:28:41] 2025-06-04 11:28:23,143 | INFO     | job 6678071462 has finished - writing final server update
[2025-06-04 13:28:41] 2025-06-04 11:28:23,144 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:28:41] 2025-06-04 11:28:23,146 | INFO     | executing command: lscpu
[2025-06-04 13:28:41] 2025-06-04 11:28:23,164 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:28:41] 2025-06-04 11:28:25,378 | INFO     | monitor loop #349: job 0:6678071462 is in state 'finished'
[2025-06-04 13:28:41] 2025-06-04 11:28:25,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:28:41] 2025-06-04 11:28:26,736 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:28:41] 2025-06-04 11:28:26,737 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678071462/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:28:41] 2025-06-04 11:28:26,737 | INFO     | extracted standard info from prmon json
[2025-06-04 13:28:41] 2025-06-04 11:28:26,737 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:28:41] 2025-06-04 11:28:26,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:28:41] 2025-06-04 11:28:26,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:28:41] 2025-06-04 11:28:26,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | sum of square deviations: 89127252.5
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | sum of deviations: -5896119822.000002
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | mean x: 1749034330.5
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | mean y: 2408561.1818181816
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | -- intersect: 115707938532.71945
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | intersect: 115707938532.71945
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | chi2: 0.12149530268743904
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | -- intersect: 115707938532.71945
[2025-06-04 13:28:41] 2025-06-04 11:28:26,738 | INFO     | current memory leak: -66.15 B/s (using 66 data points, chi2=0.12)
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | ..............................
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | . Timing measurements:
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | . get job = 0 s
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | . initial setup = 1 s
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | . payload setup = 3 s
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | . stage-in = 0 s
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | . payload execution = 4454 s
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | . stage-out = 0 s
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | . log creation = 0 s
[2025-06-04 13:28:41] 2025-06-04 11:28:26,739 | INFO     | ..............................
[2025-06-04 13:28:41] 2025-06-04 11:28:26,949 | INFO     | 
[2025-06-04 13:28:41] 2025-06-04 11:28:26,949 | INFO     | job summary report
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | --------------------------------------------------
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | PanDA job id: 6678071462
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | task id: 45006595
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | errors: (none)
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | pilot state: finished 
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | transexitcode: 0
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | exeerrorcode: 0
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | exeerrordiag: 
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | exitcode: 0
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | exitmsg: OK
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | cpuconsumptiontime: 12766 s
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | nevents: 400
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | neventsw: 0
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | pid: 1151847
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | pgrp: 1151847
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | corecount: 3
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | event service: False
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | sizes: {0: 2405187, 3: 2405393, 11: 2405421, 4462: 2431553, 4463: 2440500, 4465: 2440556, 4471: 2440854}
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | --------------------------------------------------
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | 
[2025-06-04 13:28:41] 2025-06-04 11:28:26,950 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,968 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:28:41] 2025-06-04 11:28:26,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,968 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:28:41] 2025-06-04 11:28:26,968 | INFO     | job 6678071462 has completed (purged errors)
[2025-06-04 13:28:41] 2025-06-04 11:28:26,968 | INFO     | overall cleanup function is called
[2025-06-04 13:28:41] 2025-06-04 11:28:27,975 | INFO     | --- collectZombieJob: --- 10, [1151847]
[2025-06-04 13:28:41] 2025-06-04 11:28:27,975 | INFO     | zombie collector waiting for pid 1151847
[2025-06-04 13:28:41] 2025-06-04 11:28:27,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:28:41] 2025-06-04 11:28:27,975 | INFO     | collected zombie processes
[2025-06-04 13:28:41] 2025-06-04 11:28:27,975 | INFO     | will attempt to kill all subprocesses of pid=1151847
[2025-06-04 13:28:41] 2025-06-04 11:28:28,016 | INFO     | process IDs to be killed: [1151847] (in reverse order)
[2025-06-04 13:28:41] 2025-06-04 11:28:28,042 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:28:41] 2025-06-04 11:28:28,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:28:41] 2025-06-04 11:28:28,043 | INFO     | did not find any defunct processes belonging to 1151847
[2025-06-04 13:28:41] 2025-06-04 11:28:28,044 | INFO     | did not find any defunct processes belonging to 1151847
[2025-06-04 13:28:41] 2025-06-04 11:28:28,044 | INFO     | ready for new job
[2025-06-04 13:28:41] 2025-06-04 11:28:28,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:28:41] 2025-06-04 11:28:28,045 | INFO     | **************************************
[2025-06-04 13:28:41] 2025-06-04 11:28:28,045 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:28:41] 2025-06-04 11:28:28,045 | INFO     | **************************************
[2025-06-04 13:28:41] 2025-06-04 11:28:28,045 | INFO     | 
[2025-06-04 13:28:41] 2025-06-04 11:28:28,045 | INFO     | architecture information:
[2025-06-04 13:28:41] 2025-06-04 11:28:28,045 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:28:41] 2025-06-04 11:28:28,055 | INFO     | cat /etc/os-release:
[2025-06-04 13:28:41] NAME="CentOS Linux"
[2025-06-04 13:28:41] VERSION="7 (Core)"
[2025-06-04 13:28:41] ID="centos"
[2025-06-04 13:28:41] ID_LIKE="rhel fedora"
[2025-06-04 13:28:41] VERSION_ID="7"
[2025-06-04 13:28:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:28:41] ANSI_COLOR="0;31"
[2025-06-04 13:28:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:28:41] HOME_URL="https://www.centos.org/"
[2025-06-04 13:28:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:28:41] 
[2025-06-04 13:28:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:28:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:28:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:28:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:28:41] 
[2025-06-04 13:28:41] 2025-06-04 11:28:28,055 | INFO     | **************************************
[2025-06-04 13:28:41] 2025-06-04 11:28:28,558 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 13:28:41] 2025-06-04 11:28:28,572 | INFO     | sufficient remaining disk space (368850239488 B)
[2025-06-04 13:28:41] 2025-06-04 11:28:28,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:28:41] 2025-06-04 11:28:28,572 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:28:41] 2025-06-04 11:28:28,572 | INFO     | update_server=False
[2025-06-04 13:28:41] 2025-06-04 11:28:28,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:28:41] 2025-06-04 11:28:28,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:28:41] 2025-06-04 11:28:28,594 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:28:41] 2025-06-04 11:28:28,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:28:41] 2025-06-04 11:28:28,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:28:41] 2025-06-04 11:28:28,765 | INFO     | all data control threads have been joined
[2025-06-04 13:28:41] 2025-06-04 11:28:28,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:28:41] 2025-06-04 11:28:28,888 | INFO     | aborting loop
[2025-06-04 13:28:41] 2025-06-04 11:28:29,578 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:29,578 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:29,609 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:29,726 | INFO     | all payload control threads have been joined
[2025-06-04 13:28:41] 2025-06-04 11:28:29,771 | INFO     | [data] control thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:29,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:28:41] 2025-06-04 11:28:29,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:29,873 | INFO     | all job control threads have been joined
[2025-06-04 13:28:41] 2025-06-04 11:28:29,893 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:30,110 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:30,643 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:30,732 | INFO     | [payload] control thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:30,741 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:30,878 | INFO     | [job] control thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:30,882 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:30,995 | INFO     | [job] validate thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:31,020 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:31,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:28:41] 2025-06-04 11:28:31,783 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:35,581 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:28:41] 2025-06-04 11:28:35,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362526275392)>', '<ExcThread(monitor, started 140362173622016)>']
[2025-06-04 13:28:41] 2025-06-04 11:28:36,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:28:41] 2025-06-04 11:28:36,638 | INFO     | [monitor] control thread has ended
[2025-06-04 13:28:41] 2025-06-04 11:28:40,949 | INFO     | all workflow threads have been joined
[2025-06-04 13:28:41] 2025-06-04 11:28:40,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:28:41] 2025-06-04 11:28:40,950 | INFO     | traces error code: 0
[2025-06-04 13:28:41] 2025-06-04 11:28:40,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:28:41] 2025-06-04 11:28:41,002 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:28:41] 2025-06-04 11:28:41,004 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:28:41] 2025-06-04 11:28:41,007 [wrapper] pilotpid: 1145346
[2025-06-04 13:28:41] 2025-06-04 11:28:41,009 [wrapper] Pilot exit status: 0
[2025-06-04 13:28:41] 2025-06-04 11:28:41,017 [wrapper] pandaids: 6678071462
[2025-06-04 13:28:41] 2025-06-04 11:28:41,034 [wrapper] cleanup supervisor_pilot 1161224 1145347
[2025-06-04 13:28:41] 2025-06-04 11:28:41,037 [wrapper] Test setup, not cleaning
[2025-06-04 13:28:41] 2025-06-04 11:28:41,039 [wrapper] apfmon messages muted
[2025-06-04 13:28:41] 2025-06-04 11:28:41,042 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:28:41] 2025-06-04 11:28:41,044 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:28:41]  *** Error codes and diagnostics ***
[2025-06-04 13:28:41]     "exeErrorCode": 0,
[2025-06-04 13:28:41]     "exeErrorDiag": "",
[2025-06-04 13:28:41]     "pilotErrorCode": 0,
[2025-06-04 13:28:41]     "pilotErrorDiag": "",
[2025-06-04 13:28:41]  *** Listing of results directory ***
[2025-06-04 13:28:41] total 397048
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:36 pilot3.tar.gz
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:46 queuedata.json
[2025-06-04 13:28:41] -rwx------ 1 boinc boinc     37140 Jun  3 22:47 runpilot2-wrapper.sh
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:28:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:13 run_atlas
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:13 job.xml
[2025-06-04 13:28:41] -rw-r--r-- 2 boinc boinc 217423359 Jun  4 12:13 EVNT.45006593._001814.pool.root.1
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc      6930 Jun  4 12:13 init_data.xml
[2025-06-04 13:28:41] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:13 shared
[2025-06-04 13:28:41] -rw-r--r-- 2 boinc boinc    508879 Jun  4 12:13 input.tar.gz
[2025-06-04 13:28:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:13 start_atlas.sh
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:13 boinc_lockfile
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc      2525 Jun  4 12:13 pandaJob.out
[2025-06-04 13:28:41] -rw------- 1 boinc boinc    986766 Jun  4 12:13 agis_schedconf.cvmfs.json
[2025-06-04 13:28:41] -rw------- 1 boinc boinc   1603667 Jun  4 12:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:28:41] drwx------ 4 boinc boinc      4096 Jun  4 12:13 pilot3
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc       529 Jun  4 13:27 boinc_task_state.xml
[2025-06-04 13:28:41] -rw------- 1 boinc boinc 183960705 Jun  4 13:28 HITS.45006595._045231.pool.root.1
[2025-06-04 13:28:41] -rw------- 1 boinc boinc        95 Jun  4 13:28 pilot_heartbeat.json
[2025-06-04 13:28:41] -rw------- 1 boinc boinc      1016 Jun  4 13:28 memory_monitor_summary.json
[2025-06-04 13:28:41] -rw------- 1 boinc boinc    237876 Jun  4 13:28 log.45006595._045231.job.log.tgz.1
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:28 boinc_mmap_file
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc        27 Jun  4 13:28 wrapper_checkpoint.txt
[2025-06-04 13:28:41] -rw------- 1 boinc boinc      7647 Jun  4 13:28 heartbeat.json
[2025-06-04 13:28:41] -rw------- 1 boinc boinc      4357 Jun  4 13:28 pilotlog.txt
[2025-06-04 13:28:41] -rw------- 1 boinc boinc    440220 Jun  4 13:28 log.45006595._045231.job.log.1
[2025-06-04 13:28:41] -rw------- 1 boinc boinc       357 Jun  4 13:28 output.list
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc       620 Jun  4 13:28 runtime_log
[2025-06-04 13:28:41] -rw------- 1 boinc boinc    696320 Jun  4 13:28 result.tar.gz
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc      8738 Jun  4 13:28 runtime_log.err
[2025-06-04 13:28:41] -rw------- 1 boinc boinc       659 Jun  4 13:28 ZT3LDmPing7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS7lKDmYHfkxn.diag
[2025-06-04 13:28:41] -rw-r--r-- 1 boinc boinc     21211 Jun  4 13:28 stderr.txt
[2025-06-04 13:28:41] HITS file was successfully produced:
[2025-06-04 13:28:41] -rw------- 1 boinc boinc 183960705 Jun  4 13:28 shared/HITS.pool.root.1
[2025-06-04 13:28:41]  *** Contents of shared directory: ***
[2025-06-04 13:28:41] total 393184
[2025-06-04 13:28:41] -rw-r--r-- 2 boinc boinc 217423359 Jun  4 12:13 ATLAS.root_0
[2025-06-04 13:28:41] -rw-r--r-- 2 boinc boinc    508879 Jun  4 12:13 input.tar.gz
[2025-06-04 13:28:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:13 start_atlas.sh
[2025-06-04 13:28:41] -rw------- 1 boinc boinc 183960705 Jun  4 13:28 HITS.pool.root.1
[2025-06-04 13:28:41] -rw------- 1 boinc boinc    696320 Jun  4 13:28 result.tar.gz
13:28:42 (1141710): run_atlas exited; CPU time 12778.060450
13:28:42 (1141710): called boinc_finish(0)

</stderr_txt>
]]>

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