Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
19:06:34 (1984055): wrapper (7.7.26015): starting
19:06:34 (1984055): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 19:06:34] Arguments: --nthreads 12
[2025-06-05 19:06:34] Threads: 12
[2025-06-05 19:06:34] Checking for CVMFS
[2025-06-05 19:06:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 19:06:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 19:06:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 19:06:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 19:06:35] 2.13.0.0 233097 4120 45776 146826 0 56 3846313 4096000 0 130560 12 3653596 99.991 1019845 230 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 19:06:35] CVMFS is ok
[2025-06-05 19:06:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 19:06:35] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 19:06:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 19:06:35] Further information can be found at the LHC@home message board.
[2025-06-05 19:06:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 19:06:35] Checking for apptainer binary...
[2025-06-05 19:06:35] apptainer is not installed, using version from CVMFS
[2025-06-05 19:06:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 19:06:35] ws24
[2025-06-05 19:06:35] apptainer works
[2025-06-05 19:06:35] Set ATHENA_PROC_NUMBER=12
[2025-06-05 19:06:35] Set ATHENA_CORE_NUMBER=12
[2025-06-05 19:06:35] Starting ATLAS job with PandaID=6678071516
[2025-06-05 19:06:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 20:22:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 20:22:07] 2025-06-05 18:16:00,130 | INFO     | adding to output.list: log.45006595._045285.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/4f/log.45006595._045285.job.log.tg
[2025-06-05 20:22:07] 2025-06-05 18:16:00,130 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 20:22:07] 2025-06-05 18:16:00,131 | INFO     | summary of transferred files:
[2025-06-05 20:22:07] 2025-06-05 18:16:00,131 | INFO     |  -- lfn=log.45006595._045285.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 20:22:07] 2025-06-05 18:16:00,131 | INFO     | stage-out finished correctly
[2025-06-05 20:22:07] 2025-06-05 18:16:00,343 | WARNING  | process 1994315 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 20:22:07] 2025-06-05 18:16:00,344 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678071516/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 20:22:07] 2025-06-05 18:16:00,542 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 20:22:07] 2025-06-05 18:16:00,588 | INFO     | number of running child processes to parent process 1994315: 1
[2025-06-05 20:22:07] 2025-06-05 18:16:00,588 | INFO     | maximum number of monitored processes: 6
[2025-06-05 20:22:07] 2025-06-05 18:16:02,914 | INFO     | PID=1987736 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 20:22:07] 2025-06-05 18:16:02,941 | INFO     | job 6678071516 has state=finished
[2025-06-05 20:22:07] 2025-06-05 18:16:02,941 | INFO     | preparing for final server update for job 6678071516 in state='finished'
[2025-06-05 20:22:07] 2025-06-05 18:16:02,942 | INFO     | this job has now completed (state=finished)
[2025-06-05 20:22:07] 2025-06-05 18:16:02,942 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 20:22:07] 2025-06-05 18:16:02,942 | INFO     | log transfer has been attempted: DONE
[2025-06-05 20:22:07] 2025-06-05 18:16:02,942 | INFO     | job 6678071516 has finished - writing final server update
[2025-06-05 20:22:07] 2025-06-05 18:16:02,942 | INFO     | total number of processed events: 400 (read)
[2025-06-05 20:22:07] 2025-06-05 18:16:02,952 | INFO     | executing command: lscpu
[2025-06-05 20:22:07] 2025-06-05 18:16:03,003 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 20:22:07] 2025-06-05 18:16:03,092 | INFO     | monitor loop #305: job 0:6678071516 is in state 'finished'
[2025-06-05 20:22:07] 2025-06-05 18:16:03,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:22:07] 2025-06-05 18:16:05,595 | INFO     | monitor loop #306: job 0:6678071516 is in state 'finished'
[2025-06-05 20:22:07] 2025-06-05 18:16:05,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:22:07] 2025-06-05 18:16:08,110 | INFO     | monitor loop #307: job 0:6678071516 is in state 'finished'
[2025-06-05 20:22:07] 2025-06-05 18:16:08,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:22:07] 2025-06-05 18:16:10,614 | INFO     | monitor loop #308: job 0:6678071516 is in state 'finished'
[2025-06-05 20:22:07] 2025-06-05 18:16:10,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:22:07] 2025-06-05 18:16:13,117 | INFO     | monitor loop #309: job 0:6678071516 is in state 'finished'
[2025-06-05 20:22:07] 2025-06-05 18:16:13,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:22:07] 2025-06-05 18:16:15,624 | INFO     | monitor loop #310: job 0:6678071516 is in state 'finished'
[2025-06-05 20:22:07] 2025-06-05 18:16:15,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:22:07] 2025-06-05 18:16:15,949 | INFO     | 4173s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 20:22:07] 2025-06-05 18:16:18,127 | INFO     | monitor loop #311: job 0:6678071516 is in state 'finished'
[2025-06-05 20:22:07] 2025-06-05 18:16:18,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:22:07] 2025-06-05 18:16:20,630 | INFO     | monitor loop #312: job 0:6678071516 is in state 'finished'
[2025-06-05 20:22:07] 2025-06-05 18:16:20,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:22:07] 2025-06-05 18:16:20,806 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 20:22:07] 2025-06-05 18:16:20,806 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678071516/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 20:22:07] 2025-06-05 18:16:20,807 | INFO     | extracted standard info from prmon json
[2025-06-05 20:22:07] 2025-06-05 18:16:20,807 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 20:22:07] 2025-06-05 18:16:20,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 20:22:07] 2025-06-05 18:16:20,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 20:22:07] 2025-06-05 18:16:20,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 20:22:07] 2025-06-05 18:16:20,812 | INFO     | fitting pss+swap vs Time
[2025-06-05 20:22:07] 2025-06-05 18:16:20,812 | INFO     | sum of square deviations: 70364110.0
[2025-06-05 20:22:07] 2025-06-05 18:16:20,812 | INFO     | sum of deviations: -530546401.9999998
[2025-06-05 20:22:07] 2025-06-05 18:16:20,812 | INFO     | mean x: 1749145370.0
[2025-06-05 20:22:07] 2025-06-05 18:16:20,812 | INFO     | mean y: 2721056.295081967
[2025-06-05 20:22:07] 2025-06-05 18:16:20,813 | INFO     | -- intersect: 13191302317.799824
[2025-06-05 20:22:07] 2025-06-05 18:16:20,813 | INFO     | intersect: 13191302317.799824
[2025-06-05 20:22:07] 2025-06-05 18:16:20,813 | INFO     | chi2: 0.049877960249078285
[2025-06-05 20:22:07] 2025-06-05 18:16:20,814 | INFO     | -- intersect: 13191302317.799824
[2025-06-05 20:22:07] 2025-06-05 18:16:20,814 | INFO     | current memory leak: -7.54 B/s (using 61 data points, chi2=0.05)
[2025-06-05 20:22:07] 2025-06-05 18:16:20,814 | INFO     | ..............................
[2025-06-05 20:22:07] 2025-06-05 18:16:20,814 | INFO     | . Timing measurements:
[2025-06-05 20:22:07] 2025-06-05 18:16:20,815 | INFO     | . get job = 0 s
[2025-06-05 20:22:07] 2025-06-05 18:16:20,815 | INFO     | . initial setup = 6 s
[2025-06-05 20:22:07] 2025-06-05 18:16:20,815 | INFO     | . payload setup = 6 s
[2025-06-05 20:22:07] 2025-06-05 18:16:20,815 | INFO     | . stage-in = 0 s
[2025-06-05 20:22:07] 2025-06-05 18:16:20,815 | INFO     | . payload execution = 4124 s
[2025-06-05 20:22:07] 2025-06-05 18:16:20,815 | INFO     | . stage-out = 1 s
[2025-06-05 20:22:07] 2025-06-05 18:16:20,815 | INFO     | . log creation = 0 s
[2025-06-05 20:22:07] 2025-06-05 18:16:20,815 | INFO     | ..............................
[2025-06-05 20:22:07] 2025-06-05 18:16:20,937 | INFO     | 
[2025-06-05 20:22:07] 2025-06-05 18:16:20,937 | INFO     | job summary report
[2025-06-05 20:22:07] 2025-06-05 18:16:20,937 | INFO     | --------------------------------------------------
[2025-06-05 20:22:07] 2025-06-05 18:16:20,937 | INFO     | PanDA job id: 6678071516
[2025-06-05 20:22:07] 2025-06-05 18:16:20,937 | INFO     | task id: 45006595
[2025-06-05 20:22:07] 2025-06-05 18:16:20,937 | INFO     | errors: (none)
[2025-06-05 20:22:07] 2025-06-05 18:16:20,937 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 20:22:07] 2025-06-05 18:16:20,937 | INFO     | pilot state: finished 
[2025-06-05 20:22:07] 2025-06-05 18:16:20,937 | INFO     | transexitcode: 0
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | exeerrorcode: 0
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | exeerrordiag: 
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | exitcode: 0
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | exitmsg: OK
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | cpuconsumptiontime: 36752 s
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | nevents: 400
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | neventsw: 0
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | pid: 1994315
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | pgrp: 1994315
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | corecount: 12
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | event service: False
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | sizes: {0: 2397343, 4: 2397549, 11: 2397577, 4134: 2423276, 4136: 2432287, 4157: 2432401}
[2025-06-05 20:22:07] 2025-06-05 18:16:20,938 | INFO     | --------------------------------------------------
[2025-06-05 20:22:07] 2025-06-05 18:16:20,939 | INFO     | 
[2025-06-05 20:22:07] 2025-06-05 18:16:20,939 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 20:22:07] 2025-06-05 18:16:21,008 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,009 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,009 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,009 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 20:22:07] 2025-06-05 18:16:21,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,011 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 20:22:07] 2025-06-05 18:16:21,011 | INFO     | job 6678071516 has completed (purged errors)
[2025-06-05 20:22:07] 2025-06-05 18:16:21,011 | INFO     | overall cleanup function is called
[2025-06-05 20:22:07] 2025-06-05 18:16:22,020 | INFO     | --- collectZombieJob: --- 10, [1994315]
[2025-06-05 20:22:07] 2025-06-05 18:16:22,020 | INFO     | zombie collector waiting for pid 1994315
[2025-06-05 20:22:07] 2025-06-05 18:16:22,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 20:22:07] 2025-06-05 18:16:22,020 | INFO     | collected zombie processes
[2025-06-05 20:22:07] 2025-06-05 18:16:22,021 | INFO     | will attempt to kill all subprocesses of pid=1994315
[2025-06-05 20:22:07] 2025-06-05 18:16:22,263 | INFO     | process IDs to be killed: [1994315] (in reverse order)
[2025-06-05 20:22:07] 2025-06-05 18:16:22,423 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 20:22:07] 2025-06-05 18:16:22,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 20:22:07] 2025-06-05 18:16:22,430 | INFO     | did not find any defunct processes belonging to 1994315
[2025-06-05 20:22:07] 2025-06-05 18:16:22,437 | INFO     | did not find any defunct processes belonging to 1994315
[2025-06-05 20:22:07] 2025-06-05 18:16:22,438 | INFO     | ready for new job
[2025-06-05 20:22:07] 2025-06-05 18:16:22,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 20:22:07] 2025-06-05 18:16:22,439 | INFO     | **************************************
[2025-06-05 20:22:07] 2025-06-05 18:16:22,439 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 20:22:07] 2025-06-05 18:16:22,439 | INFO     | **************************************
[2025-06-05 20:22:07] 2025-06-05 18:16:22,439 | INFO     | 
[2025-06-05 20:22:07] 2025-06-05 18:16:22,441 | INFO     | architecture information:
[2025-06-05 20:22:07] 2025-06-05 18:16:22,445 | INFO     | executing command: cat /etc/os-release
[2025-06-05 20:22:07] 2025-06-05 18:16:22,477 | INFO     | cat /etc/os-release:
[2025-06-05 20:22:07] NAME="CentOS Linux"
[2025-06-05 20:22:07] VERSION="7 (Core)"
[2025-06-05 20:22:07] ID="centos"
[2025-06-05 20:22:07] ID_LIKE="rhel fedora"
[2025-06-05 20:22:07] VERSION_ID="7"
[2025-06-05 20:22:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 20:22:07] ANSI_COLOR="0;31"
[2025-06-05 20:22:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 20:22:07] HOME_URL="https://www.centos.org/"
[2025-06-05 20:22:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 20:22:07] 
[2025-06-05 20:22:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 20:22:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 20:22:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 20:22:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 20:22:07] 
[2025-06-05 20:22:07] 2025-06-05 18:16:22,477 | INFO     | **************************************
[2025-06-05 20:22:07] 2025-06-05 18:16:22,980 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 20:22:07] 2025-06-05 18:16:23,030 | INFO     | sufficient remaining disk space (16288579584 B)
[2025-06-05 20:22:07] 2025-06-05 18:16:23,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 20:22:07] 2025-06-05 18:16:23,031 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 20:22:07] 2025-06-05 18:16:23,031 | INFO     | update_server=False
[2025-06-05 20:22:07] 2025-06-05 18:16:23,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 20:22:07] 2025-06-05 18:16:23,031 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 20:22:07] 2025-06-05 18:16:23,032 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 20:22:07] 2025-06-05 18:16:23,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 20:22:07] 2025-06-05 18:16:23,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 20:22:07] 2025-06-05 18:16:23,136 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 20:22:07] 2025-06-05 18:16:23,136 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 20:22:07] 2025-06-05 18:16:23,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:22:07] 2025-06-05 18:16:23,137 | INFO     | will abort loop
[2025-06-05 20:22:07] 2025-06-05 18:16:23,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 20:22:07] 2025-06-05 18:16:23,564 | INFO     | all payload control threads have been joined
[2025-06-05 20:22:07] 2025-06-05 18:16:23,612 | INFO     | all data control threads have been joined
[2025-06-05 20:22:07] 2025-06-05 18:16:24,001 | INFO     | all job control threads have been joined
[2025-06-05 20:22:07] 2025-06-05 18:16:24,040 | INFO     | [job] retrieve thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,060 | INFO     | [payload] failed_post thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,142 | INFO     | [job] job monitor thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,499 | INFO     | [data] copytool_in thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,569 | INFO     | [payload] control thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,595 | INFO     | [job] validate thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,617 | INFO     | [data] control thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,636 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,650 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 20:22:07] 2025-06-05 18:16:24,758 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:24,870 | INFO     | [payload] validate_post thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:25,006 | INFO     | [job] control thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:25,290 | INFO     | [data] copytool_out thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:25,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:22:07] 2025-06-05 18:16:26,955 | INFO     | [job] queue monitor thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:28,693 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:33,486 | INFO     | job.realtimelogging is not enabled
[2025-06-05 20:22:07] 2025-06-05 18:16:34,491 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 20:22:07] 2025-06-05 18:16:36,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139363823306560)>', '<ExcThread(monitor, started 139363157534464)>']
[2025-06-05 20:22:07] 2025-06-05 18:16:37,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 20:22:07] 2025-06-05 18:16:37,102 | INFO     | [monitor] control thread has ended
[2025-06-05 20:22:07] 2025-06-05 18:16:41,283 | INFO     | all workflow threads have been joined
[2025-06-05 20:22:07] 2025-06-05 18:16:41,283 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 20:22:07] 2025-06-05 18:16:41,284 | INFO     | traces error code: 0
[2025-06-05 20:22:07] 2025-06-05 18:16:41,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 20:22:07] 2025-06-05 18:16:41,450 [wrapper] ==== pilot stdout END ====
[2025-06-05 20:22:07] 2025-06-05 18:16:41,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 20:22:07] 2025-06-05 18:16:41,462 [wrapper] pilotpid: 1987736
[2025-06-05 20:22:07] 2025-06-05 18:16:41,470 [wrapper] Pilot exit status: 0
[2025-06-05 20:22:07] 2025-06-05 18:16:41,491 [wrapper] pandaids: 6678071516
[2025-06-05 20:22:07] 2025-06-05 18:16:41,618 [wrapper] cleanup supervisor_pilot 2003937 1987737
[2025-06-05 20:22:07] 2025-06-05 18:16:41,627 [wrapper] Test setup, not cleaning
[2025-06-05 20:22:07] 2025-06-05 18:16:41,632 [wrapper] apfmon messages muted
[2025-06-05 20:22:07] 2025-06-05 18:16:41,644 [wrapper] ==== wrapper stdout END ====
[2025-06-05 20:22:07] 2025-06-05 18:16:41,651 [wrapper] ==== wrapper stderr END ====
[2025-06-05 20:22:07]  *** Error codes and diagnostics ***
[2025-06-05 20:22:07]     "exeErrorCode": 0,
[2025-06-05 20:22:07]     "exeErrorDiag": "",
[2025-06-05 20:22:07]     "pilotErrorCode": 0,
[2025-06-05 20:22:07]     "pilotErrorDiag": "",
[2025-06-05 20:22:07]  *** Listing of results directory ***
[2025-06-05 20:22:07] total 390872
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:36 pilot3.tar.gz
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:46 queuedata.json
[2025-06-05 20:22:07] -rwx------ 1 boinc boinc     37140 Jun  3 22:46 runpilot2-wrapper.sh
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc       100 Jun  5 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 20:22:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 19:06 run_atlas
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc       105 Jun  5 19:06 job.xml
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc      9498 Jun  5 19:06 init_data.xml
[2025-06-05 20:22:07] -rw-r--r-- 2 boinc boinc 214125776 Jun  5 19:06 EVNT.45006593._001817.pool.root.1
[2025-06-05 20:22:07] drwxrwx--x 2 boinc boinc      4096 Jun  5 19:06 shared
[2025-06-05 20:22:07] -rw-r--r-- 2 boinc boinc    508878 Jun  5 19:06 input.tar.gz
[2025-06-05 20:22:07] -rw-r--r-- 2 boinc boinc     15093 Jun  5 19:06 start_atlas.sh
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc         0 Jun  5 19:06 boinc_lockfile
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc      2522 Jun  5 19:06 pandaJob.out
[2025-06-05 20:22:07] -rw------- 1 boinc boinc    983229 Jun  5 19:06 agis_schedconf.cvmfs.json
[2025-06-05 20:22:07] -rw------- 1 boinc boinc   1598969 Jun  5 19:06 agis_ddmendpoints.agis.ALL.json
[2025-06-05 20:22:07] drwx------ 4 boinc boinc      4096 Jun  5 19:06 pilot3
[2025-06-05 20:22:07] -rw------- 1 boinc boinc 180791312 Jun  5 20:15 HITS.45006595._045285.pool.root.1
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc       530 Jun  5 20:15 boinc_task_state.xml
[2025-06-05 20:22:07] -rw------- 1 boinc boinc      1027 Jun  5 20:15 memory_monitor_summary.json
[2025-06-05 20:22:07] -rw------- 1 boinc boinc    344467 Jun  5 20:15 log.45006595._045285.job.log.tgz.1
[2025-06-05 20:22:07] -rw------- 1 boinc boinc        95 Jun  5 20:16 pilot_heartbeat.json
[2025-06-05 20:22:07] -rw------- 1 boinc boinc      7653 Jun  5 20:16 heartbeat.json
[2025-06-05 20:22:07] -rw------- 1 boinc boinc      4741 Jun  5 20:16 pilotlog.txt
[2025-06-05 20:22:07] -rw------- 1 boinc boinc    404228 Jun  5 20:16 log.45006595._045285.job.log.1
[2025-06-05 20:22:07] -rw------- 1 boinc boinc       357 Jun  5 20:16 output.list
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc       620 Jun  5 20:16 runtime_log
[2025-06-05 20:22:07] -rw------- 1 boinc boinc    768000 Jun  5 20:16 result.tar.gz
[2025-06-05 20:22:07] -rw------- 1 boinc boinc       639 Jun  5 20:16 SrCODmvhng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN7lKDmKr5Zjm.diag
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc      8686 Jun  5 20:16 runtime_log.err
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc        27 Jun  5 20:21 wrapper_checkpoint.txt
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc      8192 Jun  5 20:22 boinc_mmap_file
[2025-06-05 20:22:07] -rw-r--r-- 1 boinc boinc     22473 Jun  5 20:22 stderr.txt
[2025-06-05 20:22:07] HITS file was successfully produced:
[2025-06-05 20:22:07] -rw------- 1 boinc boinc 180791312 Jun  5 20:15 shared/HITS.pool.root.1
[2025-06-05 20:22:07]  *** Contents of shared directory: ***
[2025-06-05 20:22:07] total 386940
[2025-06-05 20:22:07] -rw-r--r-- 2 boinc boinc 214125776 Jun  5 19:06 ATLAS.root_0
[2025-06-05 20:22:07] -rw-r--r-- 2 boinc boinc    508878 Jun  5 19:06 input.tar.gz
[2025-06-05 20:22:07] -rw-r--r-- 2 boinc boinc     15093 Jun  5 19:06 start_atlas.sh
[2025-06-05 20:22:07] -rw------- 1 boinc boinc 180791312 Jun  5 20:15 HITS.pool.root.1
[2025-06-05 20:22:07] -rw------- 1 boinc boinc    768000 Jun  5 20:16 result.tar.gz
20:22:09 (1984055): run_atlas exited; CPU time 36568.634909
20:22:09 (1984055): called boinc_finish(0)

</stderr_txt>
]]>

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