Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:48:27 (22789): wrapper (7.7.26015): starting
12:48:27 (22789): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:48:27] Arguments: --nthreads 8
[2025-06-04 12:48:27] Threads: 8
[2025-06-04 12:48:27] Checking for CVMFS
[2025-06-04 12:48:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:48:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:48:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:48:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:48:30] 2.11.2.0 12147 33108 99784 146777 2 59 23908124 25165825 3132 130560 0 17775978 99.718 20765344 2111 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 12:48:30] CVMFS is ok
[2025-06-04 12:48:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:48:30] Checking for apptainer binary...
[2025-06-04 12:48:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:48:30] Running /usr/bin/apptainer --version
[2025-06-04 12:48:30] apptainer version 1.3.2-1.el7
[2025-06-04 12:48:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:23:36] cg-vwn304.simple-grid.lan
[2025-06-04 13:23:36] apptainer works
[2025-06-04 13:23:36] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:23:36] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:23:36] Starting ATLAS job with PandaID=6678071667
[2025-06-04 13:23:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:49:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:49:48] 2025-06-04 15:28:38,890 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6678071667/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:49:48] 2025-06-04 15:28:38,890 | INFO     | extracted standard info from prmon json
[2025-06-04 18:49:48] 2025-06-04 15:28:38,891 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:49:48] 2025-06-04 15:28:38,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:49:48] 2025-06-04 15:28:38,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:49:48] 2025-06-04 15:28:38,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:49:48] 2025-06-04 15:28:38,896 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:49:48] 2025-06-04 15:28:38,896 | INFO     | sum of square deviations: 3723716330.0
[2025-06-04 18:49:48] 2025-06-04 15:28:38,898 | INFO     | sum of deviations: 85135302639.0
[2025-06-04 18:49:48] 2025-06-04 15:28:38,899 | INFO     | mean x: 1749043844.0
[2025-06-04 18:49:48] 2025-06-04 15:28:38,899 | INFO     | mean y: 2416523.013100437
[2025-06-04 18:49:48] 2025-06-04 15:28:38,899 | INFO     | -- intersect: -39985961696.93039
[2025-06-04 18:49:48] 2025-06-04 15:28:38,899 | INFO     | intersect: -39985961696.93039
[2025-06-04 18:49:48] 2025-06-04 15:28:38,899 | INFO     | chi2: 5.72912999874225
[2025-06-04 18:49:48] 2025-06-04 15:28:38,900 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 18:49:48] 2025-06-04 15:28:38,902 | INFO     | sum of deviations: 98095901970.5
[2025-06-04 18:49:48] 2025-06-04 15:28:38,902 | INFO     | mean x: 1749043691.5
[2025-06-04 18:49:48] 2025-06-04 15:28:38,902 | INFO     | mean y: 2424635.28125
[2025-06-04 18:49:48] 2025-06-04 15:28:38,902 | INFO     | -- intersect: -49228466798.44168
[2025-06-04 18:49:48] 2025-06-04 15:28:38,902 | INFO     | intersect: -49228466798.44168
[2025-06-04 18:49:48] 2025-06-04 15:28:38,902 | INFO     | chi2: 4.997805012165203
[2025-06-04 18:49:48] 2025-06-04 15:28:38,903 | INFO     | current chi2=4.997805012165203 (change=12.765026919228568 %)
[2025-06-04 18:49:48] 2025-06-04 15:28:38,903 | INFO     | right removable region: 223
[2025-06-04 18:49:48] 2025-06-04 15:28:38,903 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 18:49:48] 2025-06-04 15:28:38,905 | INFO     | sum of deviations: 10408370890.999994
[2025-06-04 18:49:48] 2025-06-04 15:28:38,905 | INFO     | mean x: 1749043996.5
[2025-06-04 18:49:48] 2025-06-04 15:28:38,905 | INFO     | mean y: 2464223.776785714
[2025-06-04 18:49:48] 2025-06-04 15:28:38,905 | INFO     | -- intersect: -5221132852.133679
[2025-06-04 18:49:48] 2025-06-04 15:28:38,905 | INFO     | intersect: -5221132852.133679
[2025-06-04 18:49:48] 2025-06-04 15:28:38,906 | INFO     | chi2: 1.469779314139346
[2025-06-04 18:49:48] 2025-06-04 15:28:38,906 | INFO     | current chi2=1.469779314139346 (change=74.34550595881022 %)
[2025-06-04 18:49:48] 2025-06-04 15:28:38,906 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 18:49:48] 2025-06-04 15:28:38,908 | INFO     | sum of deviations: -15480230957.999998
[2025-06-04 18:49:48] 2025-06-04 15:28:38,908 | INFO     | mean x: 1749044149.0
[2025-06-04 18:49:48] 2025-06-04 15:28:38,908 | INFO     | mean y: 2481405.771689498
[2025-06-04 18:49:48] 2025-06-04 15:28:38,908 | INFO     | -- intersect: 8315839627.648693
[2025-06-04 18:49:48] 2025-06-04 15:28:38,909 | INFO     | intersect: 8315839627.648693
[2025-06-04 18:49:48] 2025-06-04 15:28:38,909 | INFO     | chi2: 0.8181687719499615
[2025-06-04 18:49:48] 2025-06-04 15:28:38,909 | INFO     | current chi2=0.8181687719499615 (change=44.333903458897574 %)
[2025-06-04 18:49:48] 2025-06-04 15:28:38,909 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 18:49:48] 2025-06-04 15:28:38,911 | INFO     | sum of deviations: -18166532884.5
[2025-06-04 18:49:48] 2025-06-04 15:28:38,911 | INFO     | mean x: 1749044301.5
[2025-06-04 18:49:48] 2025-06-04 15:28:38,911 | INFO     | mean y: 2483253.621495327
[2025-06-04 18:49:48] 2025-06-04 15:28:38,911 | INFO     | -- intersect: 10458411602.637415
[2025-06-04 18:49:48] 2025-06-04 15:28:38,911 | INFO     | intersect: 10458411602.637415
[2025-06-04 18:49:48] 2025-06-04 15:28:38,912 | INFO     | chi2: 0.8000817980403003
[2025-06-04 18:49:48] 2025-06-04 15:28:38,912 | INFO     | current chi2=0.8000817980403003 (change=2.210665394445948 %)
[2025-06-04 18:49:48] 2025-06-04 15:28:38,912 | INFO     | left removable region: 30
[2025-06-04 18:49:48] 2025-06-04 15:28:38,912 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 18:49:48] 2025-06-04 15:28:38,914 | INFO     | sum of deviations: -724207554.9999993
[2025-06-04 18:49:48] 2025-06-04 15:28:38,914 | INFO     | mean x: 1749044576.0
[2025-06-04 18:49:48] 2025-06-04 15:28:38,914 | INFO     | mean y: 2490945.284974093
[2025-06-04 18:49:48] 2025-06-04 15:28:38,914 | INFO     | -- intersect: 570722356.6613144
[2025-06-04 18:49:48] 2025-06-04 15:28:38,914 | INFO     | intersect: 570722356.6613144
[2025-06-04 18:49:48] 2025-06-04 15:28:38,915 | INFO     | chi2: 0.006883237375217022
[2025-06-04 18:49:48] 2025-06-04 15:28:38,915 | INFO     | -- intersect: 570722356.6613144
[2025-06-04 18:49:48] 2025-06-04 15:28:38,915 | INFO     | current memory leak: -0.32 B/s (using 193 data points, chi2=0.01)
[2025-06-04 18:49:48] 2025-06-04 15:28:38,916 | INFO     | ..............................
[2025-06-04 18:49:48] 2025-06-04 15:28:38,916 | INFO     | . Timing measurements:
[2025-06-04 18:49:48] 2025-06-04 15:28:38,916 | INFO     | . get job = 0 s
[2025-06-04 18:49:48] 2025-06-04 15:28:38,916 | INFO     | . initial setup = 22 s
[2025-06-04 18:49:48] 2025-06-04 15:28:38,916 | INFO     | . payload setup = 161 s
[2025-06-04 18:49:48] 2025-06-04 15:28:38,916 | INFO     | . stage-in = 0 s
[2025-06-04 18:49:48] 2025-06-04 15:28:38,916 | INFO     | . payload execution = 14073 s
[2025-06-04 18:49:48] 2025-06-04 15:28:38,916 | INFO     | . stage-out = 3 s
[2025-06-04 18:49:48] 2025-06-04 15:28:38,916 | INFO     | . log creation = 1 s
[2025-06-04 18:49:48] 2025-06-04 15:28:38,917 | INFO     | ..............................
[2025-06-04 18:49:48] 2025-06-04 15:28:39,056 | INFO     | 
[2025-06-04 18:49:48] 2025-06-04 15:28:39,056 | INFO     | job summary report
[2025-06-04 18:49:48] 2025-06-04 15:28:39,056 | INFO     | --------------------------------------------------
[2025-06-04 18:49:48] 2025-06-04 15:28:39,056 | INFO     | PanDA job id: 6678071667
[2025-06-04 18:49:48] 2025-06-04 15:28:39,056 | INFO     | task id: 45006595
[2025-06-04 18:49:48] 2025-06-04 15:28:39,056 | INFO     | errors: (none)
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | pilot state: finished 
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | transexitcode: 0
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | exeerrorcode: 0
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | exeerrordiag: 
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | exitcode: 0
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | exitmsg: OK
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | cpuconsumptiontime: 51043 s
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | nevents: 400
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | neventsw: 0
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | pid: 20846
[2025-06-04 18:49:48] 2025-06-04 15:28:39,057 | INFO     | pgrp: 20846
[2025-06-04 18:49:48] 2025-06-04 15:28:39,058 | INFO     | corecount: 8
[2025-06-04 18:49:48] 2025-06-04 15:28:39,058 | INFO     | event service: False
[2025-06-04 18:49:48] 2025-06-04 15:28:39,058 | INFO     | sizes: {0: 2404354, 1: 2405210, 2: 2405238, 13: 2405238, 23: 2405294, 34: 2405322, 45: 2405478, 56: 2405506, 66: 2405534, 77: 2405562, 83: 2405824, 88: 2406160, 14
[2025-06-04 18:49:48] 2025-06-04 15:28:39,058 | INFO     | --------------------------------------------------
[2025-06-04 18:49:48] 2025-06-04 15:28:39,058 | INFO     | 
[2025-06-04 18:49:48] 2025-06-04 15:28:39,058 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-04 18:49:48] 2025-06-04 15:28:39,488 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,489 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:49:48] 2025-06-04 15:28:39,490 | INFO     | job 6678071667 has completed (purged errors)
[2025-06-04 18:49:48] 2025-06-04 15:28:39,490 | INFO     | overall cleanup function is called
[2025-06-04 18:49:48] 2025-06-04 15:28:40,499 | INFO     | --- collectZombieJob: --- 10, [20846]
[2025-06-04 18:49:48] 2025-06-04 15:28:40,499 | INFO     | zombie collector waiting for pid 20846
[2025-06-04 18:49:48] 2025-06-04 15:28:40,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:49:48] 2025-06-04 15:28:40,499 | INFO     | collected zombie processes
[2025-06-04 18:49:48] 2025-06-04 15:28:40,499 | INFO     | will attempt to kill all subprocesses of pid=20846
[2025-06-04 18:49:48] 2025-06-04 15:28:40,607 | INFO     | process IDs to be killed: [20846] (in reverse order)
[2025-06-04 18:49:48] 2025-06-04 15:28:41,366 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:49:48] 2025-06-04 15:28:41,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:49:48] 2025-06-04 15:28:41,370 | INFO     | did not find any defunct processes belonging to 20846
[2025-06-04 18:49:48] 2025-06-04 15:28:41,373 | INFO     | did not find any defunct processes belonging to 20846
[2025-06-04 18:49:48] 2025-06-04 15:28:41,374 | INFO     | ready for new job
[2025-06-04 18:49:48] 2025-06-04 15:28:41,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:49:48] 2025-06-04 15:28:41,376 | INFO     | **************************************
[2025-06-04 18:49:48] 2025-06-04 15:28:41,376 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:49:48] 2025-06-04 15:28:41,376 | INFO     | **************************************
[2025-06-04 18:49:48] 2025-06-04 15:28:41,376 | INFO     | 
[2025-06-04 18:49:48] 2025-06-04 15:28:41,377 | INFO     | pilot is running in a VM
[2025-06-04 18:49:48] 2025-06-04 15:28:41,377 | INFO     | architecture information:
[2025-06-04 18:49:48] 2025-06-04 15:28:41,391 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:49:48] 2025-06-04 15:28:41,640 | INFO     | cat /etc/os-release:
[2025-06-04 18:49:48] NAME="CentOS Linux"
[2025-06-04 18:49:48] VERSION="7 (Core)"
[2025-06-04 18:49:48] ID="centos"
[2025-06-04 18:49:48] ID_LIKE="rhel fedora"
[2025-06-04 18:49:48] VERSION_ID="7"
[2025-06-04 18:49:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:49:48] ANSI_COLOR="0;31"
[2025-06-04 18:49:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:49:48] HOME_URL="https://www.centos.org/"
[2025-06-04 18:49:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:49:48] 
[2025-06-04 18:49:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:49:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:49:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:49:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:49:48] 
[2025-06-04 18:49:48] 2025-06-04 15:28:41,640 | INFO     | **************************************
[2025-06-04 18:49:48] 2025-06-04 15:28:42,144 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-04 18:49:48] 2025-06-04 15:28:42,393 | INFO     | sufficient remaining disk space (496837328896 B)
[2025-06-04 18:49:48] 2025-06-04 15:28:42,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:49:48] 2025-06-04 15:28:42,394 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:49:48] 2025-06-04 15:28:42,394 | INFO     | update_server=False
[2025-06-04 18:49:48] 2025-06-04 15:28:42,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:49:48] 2025-06-04 15:28:42,835 | INFO     | all data control threads have been joined
[2025-06-04 18:49:48] 2025-06-04 15:28:42,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:49:48] 2025-06-04 15:28:42,976 | INFO     | all job control threads have been joined
[2025-06-04 18:49:48] 2025-06-04 15:28:43,124 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:49:48] 2025-06-04 15:28:43,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:49:48] 2025-06-04 15:28:43,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:49:48] 2025-06-04 15:28:43,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:49:48] 2025-06-04 15:28:43,372 | INFO     | aborting loop
[2025-06-04 18:49:48] 2025-06-04 15:28:43,400 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:43,517 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:43,517 | INFO     | all payload control threads have been joined
[2025-06-04 18:49:48] 2025-06-04 15:28:43,541 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:43,841 | INFO     | [data] control thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:43,981 | INFO     | [job] control thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:44,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:49:48] 2025-06-04 15:28:44,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:49:48] 2025-06-04 15:28:44,275 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:44,318 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:44,377 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:44,524 | INFO     | [payload] control thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:44,627 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:44,704 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:44,843 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:44,857 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:44,857 | INFO     | [job] validate thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:45,078 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:48,184 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:49:48] 2025-06-04 15:28:49,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139927675823936)>', '<ExcThread(monitor, started 139926939100928)>']
[2025-06-04 18:49:48] 2025-06-04 15:28:50,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:49:48] 2025-06-04 15:28:50,166 | INFO     | [monitor] control thread has ended
[2025-06-04 18:49:48] 2025-06-04 15:28:54,594 | INFO     | all workflow threads have been joined
[2025-06-04 18:49:48] 2025-06-04 15:28:54,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:49:48] 2025-06-04 15:28:54,594 | INFO     | traces error code: 0
[2025-06-04 18:49:48] 2025-06-04 15:28:54,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:49:48] 2025-06-04 15:28:54,901 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:49:48] 2025-06-04 15:28:54,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:49:48] 2025-06-04 15:28:55,027 [wrapper] pilotpid: 13585
[2025-06-04 18:49:48] 2025-06-04 15:28:55,079 [wrapper] Pilot exit status: 0
[2025-06-04 18:49:48] 2025-06-04 15:28:55,475 [wrapper] pandaids: 6678071667
[2025-06-04 18:49:48] 2025-06-04 15:28:56,073 [wrapper] cleanup supervisor_pilot 18015 13586
[2025-06-04 18:49:48] 2025-06-04 15:28:56,184 [wrapper] Test setup, not cleaning
[2025-06-04 18:49:48] 2025-06-04 15:28:56,269 [wrapper] apfmon messages muted
[2025-06-04 18:49:48] 2025-06-04 15:28:56,393 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:49:48] 2025-06-04 15:28:56,508 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:49:48]  *** Error codes and diagnostics ***
[2025-06-04 18:49:48]     "exeErrorCode": 0,
[2025-06-04 18:49:48]     "exeErrorDiag": "",
[2025-06-04 18:49:48]     "pilotErrorCode": 0,
[2025-06-04 18:49:48]     "pilotErrorDiag": "",
[2025-06-04 18:49:48]  *** Listing of results directory ***
[2025-06-04 18:49:48] total 388220
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:53 queuedata.json
[2025-06-04 18:49:48] -rwx------. 1 boinc boinc     37140 Jun  3 22:55 runpilot2-wrapper.sh
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc       100 Jun  4 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:49:48] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 12:48 run_atlas
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc       105 Jun  4 12:48 job.xml
[2025-06-04 18:49:48] -rw-r--r--. 2 boinc boinc 212874817 Jun  4 12:48 EVNT.45006593._001823.pool.root.1
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc      6391 Jun  4 12:48 init_data.xml
[2025-06-04 18:49:48] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:48 start_atlas.sh
[2025-06-04 18:49:48] drwxrwx--x. 2 boinc boinc        68 Jun  4 12:48 shared
[2025-06-04 18:49:48] -rw-r--r--. 2 boinc boinc    508878 Jun  4 12:48 input.tar.gz
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc         0 Jun  4 12:48 boinc_lockfile
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc      2524 Jun  4 13:23 pandaJob.out
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc    986812 Jun  4 13:26 agis_schedconf.cvmfs.json
[2025-06-04 18:49:48] drwx------. 4 boinc boinc      4096 Jun  4 13:26 pilot3
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc 177611531 Jun  4 17:25 HITS.45006595._045436.pool.root.1
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc       531 Jun  4 17:26 boinc_task_state.xml
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc      1018 Jun  4 17:27 memory_monitor_summary.json
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc   1598969 Jun  4 17:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc    373804 Jun  4 17:27 log.45006595._045436.job.log.tgz.1
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc        95 Jun  4 17:28 pilot_heartbeat.json
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc      7689 Jun  4 17:28 heartbeat.json
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc      4416 Jun  4 17:28 pilotlog.txt
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc   1240995 Jun  4 17:28 log.45006595._045436.job.log.1
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc       357 Jun  4 17:28 output.list
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc       620 Jun  4 17:28 runtime_log
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc   1638400 Jun  4 17:28 result.tar.gz
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc      8659 Jun  4 17:28 runtime_log.err
[2025-06-04 18:49:48] -rw-------. 1 boinc boinc       657 Jun  4 17:28 oR8NDmOqng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz8lKDmQgUpGn.diag
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:49 boinc_mmap_file
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:49 wrapper_checkpoint.txt
[2025-06-04 18:49:48] -rw-r--r--. 1 boinc boinc     20516 Jun  4 18:49 stderr.txt
[2025-06-04 18:49:49] HITS file was successfully produced:
[2025-06-04 18:49:49] -rw-------. 1 boinc boinc 177611531 Jun  4 17:25 shared/HITS.pool.root.1
[2025-06-04 18:49:49]  *** Contents of shared directory: ***
[2025-06-04 18:49:49] total 383456
[2025-06-04 18:49:49] -rw-r--r--. 2 boinc boinc 212874817 Jun  4 12:48 ATLAS.root_0
[2025-06-04 18:49:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:48 start_atlas.sh
[2025-06-04 18:49:49] -rw-r--r--. 2 boinc boinc    508878 Jun  4 12:48 input.tar.gz
[2025-06-04 18:49:49] -rw-------. 1 boinc boinc 177611531 Jun  4 17:25 HITS.pool.root.1
[2025-06-04 18:49:49] -rw-------. 1 boinc boinc   1638400 Jun  4 17:28 result.tar.gz
18:49:50 (22789): run_atlas exited; CPU time 51247.114066
18:49:50 (22789): called boinc_finish(0)

</stderr_txt>
]]>

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