Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:10:33 (20722): wrapper (7.7.26015): starting
11:10:33 (20722): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:10:33] Arguments: --nthreads 8
[2025-06-04 11:10:33] Threads: 8
[2025-06-04 11:10:33] Checking for CVMFS
[2025-06-04 11:10:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:10:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:10:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:10:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:10:35] 2.11.2.0 16344 33010 89000 146773 1 60 18298949 25165825 3902 130560 0 17015779 99.781 19967432 2097 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 11:10:35] CVMFS is ok
[2025-06-04 11:10:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:10:35] Checking for apptainer binary...
[2025-06-04 11:10:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:10:35] Running /usr/bin/apptainer --version
[2025-06-04 11:10:36] apptainer version 1.3.2-1.el7
[2025-06-04 11:10:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:57:38] cg-vwn432.simple-grid.lan
[2025-06-04 11:57:38] apptainer works
[2025-06-04 11:57:38] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:57:38] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:57:38] Starting ATLAS job with PandaID=6678072337
[2025-06-04 11:57:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:32:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:32:31] 2025-06-04 13:36:47,216 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6678072337/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:32:31] 2025-06-04 13:36:47,217 | INFO     | extracted standard info from prmon json
[2025-06-04 17:32:31] 2025-06-04 13:36:47,217 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:32:31] 2025-06-04 13:36:47,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:32:31] 2025-06-04 13:36:47,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:32:31] 2025-06-04 13:36:47,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:32:31] 2025-06-04 13:36:47,222 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:32:31] 2025-06-04 13:36:47,223 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,225 | INFO     | sum of deviations: -7310688777.000005
[2025-06-04 17:32:31] 2025-06-04 13:36:47,225 | INFO     | mean x: 1749037610.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,225 | INFO     | mean y: 2479274.0046948357
[2025-06-04 17:32:31] 2025-06-04 13:36:47,225 | INFO     | -- intersect: 4269745933.835964
[2025-06-04 17:32:31] 2025-06-04 13:36:47,226 | INFO     | intersect: 4269745933.835964
[2025-06-04 17:32:31] 2025-06-04 13:36:47,226 | INFO     | chi2: 2.5484534778218304
[2025-06-04 17:32:31] 2025-06-04 13:36:47,226 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,228 | INFO     | sum of deviations: 6773495754.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,228 | INFO     | mean x: 1749037457.5
[2025-06-04 17:32:31] 2025-06-04 13:36:47,228 | INFO     | mean y: 2489498.375
[2025-06-04 17:32:31] 2025-06-04 13:36:47,229 | INFO     | -- intersect: -4243252334.3732033
[2025-06-04 17:32:31] 2025-06-04 13:36:47,229 | INFO     | intersect: -4243252334.3732033
[2025-06-04 17:32:31] 2025-06-04 13:36:47,229 | INFO     | chi2: 1.7859341278560996
[2025-06-04 17:32:31] 2025-06-04 13:36:47,229 | INFO     | current chi2=1.7859341278560996 (change=29.92086599192927 %)
[2025-06-04 17:32:31] 2025-06-04 13:36:47,230 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,231 | INFO     | sum of deviations: 6625192493.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,231 | INFO     | mean x: 1749037305.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,232 | INFO     | mean y: 2489382.950738916
[2025-06-04 17:32:31] 2025-06-04 13:36:47,232 | INFO     | -- intersect: -4464774168.299998
[2025-06-04 17:32:31] 2025-06-04 13:36:47,232 | INFO     | intersect: -4464774168.299998
[2025-06-04 17:32:31] 2025-06-04 13:36:47,232 | INFO     | chi2: 1.7865557013947155
[2025-06-04 17:32:31] 2025-06-04 13:36:47,232 | INFO     | current chi2=1.7865557013947155 (change=-0.034803833406894774 %)
[2025-06-04 17:32:31] 2025-06-04 13:36:47,232 | INFO     | right removable region: 202
[2025-06-04 17:32:31] 2025-06-04 13:36:47,233 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,234 | INFO     | sum of deviations: -43376131899.5
[2025-06-04 17:32:31] 2025-06-04 13:36:47,234 | INFO     | mean x: 1749037762.5
[2025-06-04 17:32:31] 2025-06-04 13:36:47,234 | INFO     | mean y: 2505719.168269231
[2025-06-04 17:32:31] 2025-06-04 13:36:47,235 | INFO     | -- intersect: 27191404413.69373
[2025-06-04 17:32:31] 2025-06-04 13:36:47,235 | INFO     | intersect: 27191404413.69373
[2025-06-04 17:32:31] 2025-06-04 13:36:47,235 | INFO     | chi2: 0.95600556213894
[2025-06-04 17:32:31] 2025-06-04 13:36:47,235 | INFO     | current chi2=0.95600556213894 (change=62.486834840868255 %)
[2025-06-04 17:32:31] 2025-06-04 13:36:47,236 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,237 | INFO     | sum of deviations: -39519574252.99999
[2025-06-04 17:32:31] 2025-06-04 13:36:47,238 | INFO     | mean x: 1749037915.0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,238 | INFO     | mean y: 2502692.5221674875
[2025-06-04 17:32:31] 2025-06-04 13:36:47,238 | INFO     | -- intersect: 26649942050.713665
[2025-06-04 17:32:31] 2025-06-04 13:36:47,238 | INFO     | intersect: 26649942050.713665
[2025-06-04 17:32:31] 2025-06-04 13:36:47,238 | INFO     | chi2: 0.9454079425249667
[2025-06-04 17:32:31] 2025-06-04 13:36:47,238 | INFO     | current chi2=0.9454079425249667 (change=1.1085311669382334 %)
[2025-06-04 17:32:31] 2025-06-04 13:36:47,239 | INFO     | left removable region: 20
[2025-06-04 17:32:31] 2025-06-04 13:36:47,239 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 17:32:31] 2025-06-04 13:36:47,240 | INFO     | sum of deviations: -10856665899.5
[2025-06-04 17:32:31] 2025-06-04 13:36:47,240 | INFO     | mean x: 1749037884.5
[2025-06-04 17:32:31] 2025-06-04 13:36:47,241 | INFO     | mean y: 2501685.104395604
[2025-06-04 17:32:31] 2025-06-04 13:36:47,241 | INFO     | -- intersect: 10160688911.433256
[2025-06-04 17:32:31] 2025-06-04 13:36:47,241 | INFO     | intersect: 10160688911.433256
[2025-06-04 17:32:31] 2025-06-04 13:36:47,241 | INFO     | chi2: 0.10058300949817112
[2025-06-04 17:32:31] 2025-06-04 13:36:47,241 | INFO     | -- intersect: 10160688911.433256
[2025-06-04 17:32:31] 2025-06-04 13:36:47,242 | INFO     | current memory leak: -5.81 B/s (using 182 data points, chi2=0.10)
[2025-06-04 17:32:31] 2025-06-04 13:36:47,242 | INFO     | ..............................
[2025-06-04 17:32:31] 2025-06-04 13:36:47,243 | INFO     | . Timing measurements:
[2025-06-04 17:32:31] 2025-06-04 13:36:47,243 | INFO     | . get job = 0 s
[2025-06-04 17:32:31] 2025-06-04 13:36:47,243 | INFO     | . initial setup = 2 s
[2025-06-04 17:32:31] 2025-06-04 13:36:47,243 | INFO     | . payload setup = 15 s
[2025-06-04 17:32:31] 2025-06-04 13:36:47,243 | INFO     | . stage-in = 0 s
[2025-06-04 17:32:31] 2025-06-04 13:36:47,243 | INFO     | . payload execution = 12990 s
[2025-06-04 17:32:31] 2025-06-04 13:36:47,243 | INFO     | . stage-out = 2 s
[2025-06-04 17:32:31] 2025-06-04 13:36:47,243 | INFO     | . log creation = 0 s
[2025-06-04 17:32:31] 2025-06-04 13:36:47,243 | INFO     | ..............................
[2025-06-04 17:32:31] 2025-06-04 13:36:47,775 | INFO     | 
[2025-06-04 17:32:31] 2025-06-04 13:36:47,776 | INFO     | job summary report
[2025-06-04 17:32:31] 2025-06-04 13:36:47,776 | INFO     | --------------------------------------------------
[2025-06-04 17:32:31] 2025-06-04 13:36:47,776 | INFO     | PanDA job id: 6678072337
[2025-06-04 17:32:31] 2025-06-04 13:36:47,776 | INFO     | task id: 45006595
[2025-06-04 17:32:31] 2025-06-04 13:36:47,776 | INFO     | errors: (none)
[2025-06-04 17:32:31] 2025-06-04 13:36:47,776 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:32:31] 2025-06-04 13:36:47,776 | INFO     | pilot state: finished 
[2025-06-04 17:32:31] 2025-06-04 13:36:47,776 | INFO     | transexitcode: 0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | exeerrorcode: 0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | exeerrordiag: 
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | exitcode: 0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | exitmsg: OK
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | cpuconsumptiontime: 49813 s
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | nevents: 400
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | neventsw: 0
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | pid: 26756
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | pgrp: 26756
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | corecount: 8
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | event service: False
[2025-06-04 17:32:31] 2025-06-04 13:36:47,777 | INFO     | sizes: {0: 2405013, 1: 2405212, 11: 2405418, 12: 2405446, 13009: 2434677, 13012: 2444671, 13014: 2444855, 13099: 2445025}
[2025-06-04 17:32:31] 2025-06-04 13:36:47,778 | INFO     | --------------------------------------------------
[2025-06-04 17:32:31] 2025-06-04 13:36:47,778 | INFO     | 
[2025-06-04 17:32:31] 2025-06-04 13:36:47,778 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 17:32:31] 2025-06-04 13:36:48,349 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,349 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:32:31] 2025-06-04 13:36:48,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,351 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:32:31] 2025-06-04 13:36:48,351 | INFO     | job 6678072337 has completed (purged errors)
[2025-06-04 17:32:31] 2025-06-04 13:36:48,351 | INFO     | overall cleanup function is called
[2025-06-04 17:32:31] 2025-06-04 13:36:49,360 | INFO     | --- collectZombieJob: --- 10, [26756]
[2025-06-04 17:32:31] 2025-06-04 13:36:49,361 | INFO     | zombie collector waiting for pid 26756
[2025-06-04 17:32:31] 2025-06-04 13:36:49,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:32:31] 2025-06-04 13:36:49,361 | INFO     | collected zombie processes
[2025-06-04 17:32:31] 2025-06-04 13:36:49,361 | INFO     | will attempt to kill all subprocesses of pid=26756
[2025-06-04 17:32:31] 2025-06-04 13:36:49,482 | INFO     | process IDs to be killed: [26756] (in reverse order)
[2025-06-04 17:32:31] 2025-06-04 13:36:50,271 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:32:31] 2025-06-04 13:36:50,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:32:31] 2025-06-04 13:36:50,275 | INFO     | did not find any defunct processes belonging to 26756
[2025-06-04 17:32:31] 2025-06-04 13:36:50,278 | INFO     | did not find any defunct processes belonging to 26756
[2025-06-04 17:32:31] 2025-06-04 13:36:50,279 | INFO     | ready for new job
[2025-06-04 17:32:31] 2025-06-04 13:36:50,279 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:32:31] 2025-06-04 13:36:50,281 | INFO     | **************************************
[2025-06-04 17:32:31] 2025-06-04 13:36:50,281 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:32:31] 2025-06-04 13:36:50,281 | INFO     | **************************************
[2025-06-04 17:32:31] 2025-06-04 13:36:50,281 | INFO     | 
[2025-06-04 17:32:31] 2025-06-04 13:36:50,282 | INFO     | pilot is running in a VM
[2025-06-04 17:32:31] 2025-06-04 13:36:50,282 | INFO     | architecture information:
[2025-06-04 17:32:31] 2025-06-04 13:36:50,295 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:32:31] 2025-06-04 13:36:50,501 | INFO     | cat /etc/os-release:
[2025-06-04 17:32:31] NAME="CentOS Linux"
[2025-06-04 17:32:31] VERSION="7 (Core)"
[2025-06-04 17:32:31] ID="centos"
[2025-06-04 17:32:31] ID_LIKE="rhel fedora"
[2025-06-04 17:32:31] VERSION_ID="7"
[2025-06-04 17:32:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:32:31] ANSI_COLOR="0;31"
[2025-06-04 17:32:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:32:31] HOME_URL="https://www.centos.org/"
[2025-06-04 17:32:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:32:31] 
[2025-06-04 17:32:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:32:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:32:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:32:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:32:31] 
[2025-06-04 17:32:31] 2025-06-04 13:36:50,501 | INFO     | **************************************
[2025-06-04 17:32:31] 2025-06-04 13:36:51,005 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 17:32:31] 2025-06-04 13:36:51,182 | INFO     | sufficient remaining disk space (496533241856 B)
[2025-06-04 17:32:31] 2025-06-04 13:36:51,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:32:31] 2025-06-04 13:36:51,183 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:32:31] 2025-06-04 13:36:51,183 | INFO     | update_server=False
[2025-06-04 17:32:31] 2025-06-04 13:36:51,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:32:31] 2025-06-04 13:36:51,426 | INFO     | all payload control threads have been joined
[2025-06-04 17:32:31] 2025-06-04 13:36:51,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:32:31] 2025-06-04 13:36:51,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:32:31] 2025-06-04 13:36:51,711 | INFO     | aborting loop
[2025-06-04 17:32:31] 2025-06-04 13:36:52,058 | INFO     | all job control threads have been joined
[2025-06-04 17:32:31] 2025-06-04 13:36:52,155 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:32:31] 2025-06-04 13:36:52,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:32:31] 2025-06-04 13:36:52,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:32:31] 2025-06-04 13:36:52,161 | INFO     | all data control threads have been joined
[2025-06-04 17:32:31] 2025-06-04 13:36:52,190 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:52,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:32:31] 2025-06-04 13:36:52,436 | INFO     | [payload] control thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:52,632 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:52,717 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:52,772 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,066 | INFO     | [job] control thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,167 | INFO     | [data] control thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,343 | INFO     | [job] validate thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,399 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,438 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,455 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,499 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,557 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,642 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,670 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:53,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:32:31] 2025-06-04 13:36:57,897 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:32:31] 2025-06-04 13:36:59,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247997192000)>', '<ExcThread(monitor, started 140247711078144)>']
[2025-06-04 17:32:31] 2025-06-04 13:37:00,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:32:31] 2025-06-04 13:37:00,204 | INFO     | [monitor] control thread has ended
[2025-06-04 17:32:31] 2025-06-04 13:37:04,814 | INFO     | all workflow threads have been joined
[2025-06-04 17:32:31] 2025-06-04 13:37:04,815 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:32:31] 2025-06-04 13:37:04,815 | INFO     | traces error code: 0
[2025-06-04 17:32:31] 2025-06-04 13:37:04,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:32:31] 2025-06-04 13:37:05,127 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:32:31] 2025-06-04 13:37:05,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:32:31] 2025-06-04 13:37:05,239 [wrapper] pilotpid: 18262
[2025-06-04 17:32:31] 2025-06-04 13:37:05,296 [wrapper] Pilot exit status: 0
[2025-06-04 17:32:31] 2025-06-04 13:37:05,592 [wrapper] pandaids: 6678072337
[2025-06-04 17:32:31] 2025-06-04 13:37:06,202 [wrapper] cleanup supervisor_pilot 15382 18263
[2025-06-04 17:32:31] 2025-06-04 13:37:06,257 [wrapper] Test setup, not cleaning
[2025-06-04 17:32:31] 2025-06-04 13:37:06,345 [wrapper] apfmon messages muted
[2025-06-04 17:32:31] 2025-06-04 13:37:06,432 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:32:31] 2025-06-04 13:37:06,540 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:32:31]  *** Error codes and diagnostics ***
[2025-06-04 17:32:31]     "exeErrorCode": 0,
[2025-06-04 17:32:31]     "exeErrorDiag": "",
[2025-06-04 17:32:31]     "pilotErrorCode": 0,
[2025-06-04 17:32:31]     "pilotErrorDiag": "",
[2025-06-04 17:32:31]  *** Listing of results directory ***
[2025-06-04 17:32:31] total 388228
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-04 17:32:31] -rwx------. 1 boinc boinc     37140 Jun  3 23:00 runpilot2-wrapper.sh
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc      5111 Jun  3 23:00 queuedata.json
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc       100 Jun  4 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:32:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 11:10 run_atlas
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc       105 Jun  4 11:10 job.xml
[2025-06-04 17:32:31] -rw-r--r--. 2 boinc boinc 213680057 Jun  4 11:10 EVNT.45006593._001831.pool.root.1
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc      6391 Jun  4 11:10 init_data.xml
[2025-06-04 17:32:31] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:10 start_atlas.sh
[2025-06-04 17:32:31] drwxrwx--x. 2 boinc boinc        68 Jun  4 11:10 shared
[2025-06-04 17:32:31] -rw-r--r--. 2 boinc boinc    508877 Jun  4 11:10 input.tar.gz
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc         0 Jun  4 11:10 boinc_lockfile
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc      2525 Jun  4 11:57 pandaJob.out
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc    986766 Jun  4 11:58 agis_schedconf.cvmfs.json
[2025-06-04 17:32:31] drwx------. 4 boinc boinc      4096 Jun  4 11:58 pilot3
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc 177002798 Jun  4 15:34 HITS.45006595._045656.pool.root.1
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc       531 Jun  4 15:34 boinc_task_state.xml
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc      1014 Jun  4 15:35 memory_monitor_summary.json
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc   1598969 Jun  4 15:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc    385859 Jun  4 15:35 log.45006595._045656.job.log.tgz.1
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc        95 Jun  4 15:36 pilot_heartbeat.json
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc      7685 Jun  4 15:36 heartbeat.json
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc      4416 Jun  4 15:37 pilotlog.txt
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc   1136143 Jun  4 15:37 log.45006595._045656.job.log.1
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc       357 Jun  4 15:37 output.list
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc       620 Jun  4 15:37 runtime_log
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc   1546240 Jun  4 15:37 result.tar.gz
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc       657 Jun  4 15:37 ylQODmHvng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvBmKDmG8nPKo.diag
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc      8659 Jun  4 15:37 runtime_log.err
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc      8192 Jun  4 17:32 boinc_mmap_file
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc        28 Jun  4 17:32 wrapper_checkpoint.txt
[2025-06-04 17:32:31] -rw-r--r--. 1 boinc boinc     20473 Jun  4 17:32 stderr.txt
[2025-06-04 17:32:31] HITS file was successfully produced:
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc 177002798 Jun  4 15:34 shared/HITS.pool.root.1
[2025-06-04 17:32:31]  *** Contents of shared directory: ***
[2025-06-04 17:32:31] total 383556
[2025-06-04 17:32:31] -rw-r--r--. 2 boinc boinc 213680057 Jun  4 11:10 ATLAS.root_0
[2025-06-04 17:32:31] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:10 start_atlas.sh
[2025-06-04 17:32:31] -rw-r--r--. 2 boinc boinc    508877 Jun  4 11:10 input.tar.gz
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc 177002798 Jun  4 15:34 HITS.pool.root.1
[2025-06-04 17:32:31] -rw-------. 1 boinc boinc   1546240 Jun  4 15:37 result.tar.gz
17:32:33 (20722): run_atlas exited; CPU time 49984.650497
17:32:33 (20722): called boinc_finish(0)

</stderr_txt>
]]>

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