Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:05:57 (1698741): wrapper (7.7.26015): starting
07:05:57 (1698741): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 07:05:57] Arguments: --nthreads 4
[2025-06-04 07:05:57] Threads: 4
[2025-06-04 07:05:57] Checking for CVMFS
[2025-06-04 07:05:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:05:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:05:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:05:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:05:57] 2.9.2.0 1148570 1360 90052 146768 2 56 31029114 36864001 0 130560 0 1471058 99.994 303319 37876 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 07:05:57] CVMFS is ok
[2025-06-04 07:05:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:05:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:05:57] Further information can be found at the LHC@home message board.
[2025-06-04 07:05:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:05:57] Checking for apptainer binary...
[2025-06-04 07:05:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:05:57] Running /usr/bin/apptainer --version
[2025-06-04 07:05:57] apptainer version 1.3.6-6.1
[2025-06-04 07:05:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:05:57] thA317a
[2025-06-04 07:05:57] apptainer works
[2025-06-04 07:05:57] Set ATHENA_PROC_NUMBER=4
[2025-06-04 07:05:57] Set ATHENA_CORE_NUMBER=4
[2025-06-04 07:05:57] Starting ATLAS job with PandaID=6678071037
[2025-06-04 07:05:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:00:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:00:45]  is_tar=False
[2025-06-04 08:00:45]  lfn=log.45006595._044912.job.log.tgz.1
[2025-06-04 08:00:45]  mtime=0
[2025-06-04 08:00:45]  protocol_id=None
[2025-06-04 08:00:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:00:45]  replicas=None
[2025-06-04 08:00:45]  scope=mc23_13p6TeV
[2025-06-04 08:00:45]  status=None
[2025-06-04 08:00:45]  status_code=0
[2025-06-04 08:00:45]  storage_token=
[2025-06-04 08:00:45]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678071037/log.45006595._044912.job.log.tgz.1
[2025-06-04 08:00:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/58/log.45006595._044912.job.log.tgz.1
[2025-06-04 08:00:45]  workdir=None
[2025-06-04 08:00:45] ]
[2025-06-04 08:00:45] 2025-06-04 06:00:08,084 | INFO     | transferring file log.45006595._044912.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678071037/log.45006595._044912.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 08:00:45] 2025-06-04 06:00:08,084 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678071037/log.45006595._044912.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0449
[2025-06-04 08:00:45] 2025-06-04 06:00:08,097 | INFO     | adding to output.list: log.45006595._044912.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/58/log.45006595._044912.job.log.tg
[2025-06-04 08:00:45] 2025-06-04 06:00:08,098 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:00:45] 2025-06-04 06:00:08,098 | INFO     | summary of transferred files:
[2025-06-04 08:00:45] 2025-06-04 06:00:08,098 | INFO     |  -- lfn=log.45006595._044912.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:00:45] 2025-06-04 06:00:08,098 | INFO     | stage-out finished correctly
[2025-06-04 08:00:45] 2025-06-04 06:00:08,127 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:00:45] 2025-06-04 06:00:09,389 | INFO     | job 6678071037 has state=finished
[2025-06-04 08:00:45] 2025-06-04 06:00:09,389 | INFO     | preparing for final server update for job 6678071037 in state='finished'
[2025-06-04 08:00:45] 2025-06-04 06:00:09,390 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:00:45] 2025-06-04 06:00:09,390 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:00:45] 2025-06-04 06:00:09,390 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:00:45] 2025-06-04 06:00:09,390 | INFO     | job 6678071037 has finished - writing final server update
[2025-06-04 08:00:45] 2025-06-04 06:00:09,390 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:00:45] 2025-06-04 06:00:09,391 | INFO     | executing command: lscpu
[2025-06-04 08:00:45] 2025-06-04 06:00:09,405 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:00:45] 2025-06-04 06:00:10,133 | INFO     | monitor loop #253: job 0:6678071037 is in state 'finished'
[2025-06-04 08:00:45] 2025-06-04 06:00:10,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:00:45] 2025-06-04 06:00:12,636 | INFO     | monitor loop #254: job 0:6678071037 is in state 'finished'
[2025-06-04 08:00:45] 2025-06-04 06:00:12,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:00:45] 2025-06-04 06:00:13,095 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:00:45] 2025-06-04 06:00:13,096 | INFO     | found 8 cores (8 cores per socket, 1 sockets) HT, CPU MHz: 3596.4446874999994
[2025-06-04 08:00:45] 2025-06-04 06:00:13,097 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678071037/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:00:45] 2025-06-04 06:00:13,098 | INFO     | extracted standard info from prmon json
[2025-06-04 08:00:45] 2025-06-04 06:00:13,098 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:00:45] 2025-06-04 06:00:13,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:00:45] 2025-06-04 06:00:13,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:00:45] 2025-06-04 06:00:13,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:00:45] 2025-06-04 06:00:13,098 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:00:45] 2025-06-04 06:00:13,098 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 08:00:45] 2025-06-04 06:00:13,098 | INFO     | sum of deviations: -2085047100.0
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | mean x: 1749015260.5
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | mean y: 2427001.1304347827
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | -- intersect: 120884762261.79587
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | intersect: 120884762261.79587
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | chi2: 0.08427112340513211
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | -- intersect: 120884762261.79587
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | current memory leak: -69.11 B/s (using 46 data points, chi2=0.08)
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | could have reported an average CPU frequency of 3773 MHz (5 samples)
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | ..............................
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | . Timing measurements:
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | . get job = 0 s
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | . initial setup = 1 s
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | . payload setup = 3 s
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | . stage-in = 0 s
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | . payload execution = 3224 s
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | . stage-out = 0 s
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | . log creation = 0 s
[2025-06-04 08:00:45] 2025-06-04 06:00:13,099 | INFO     | ..............................
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | 
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | job summary report
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | --------------------------------------------------
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | PanDA job id: 6678071037
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | task id: 45006595
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | errors: (none)
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | pilot state: finished 
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | transexitcode: 0
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | exeerrorcode: 0
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | exeerrordiag: 
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | exitcode: 0
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | exitmsg: OK
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | cpuconsumptiontime: 12083 s
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | nevents: 400
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | neventsw: 0
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | pid: 1709060
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | pgrp: 1709060
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | corecount: 4
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | event service: False
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | sizes: {0: 2405355, 1: 2405554, 3: 2405816, 11: 2405844, 3231: 2440482, 3236: 2440652}
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | --------------------------------------------------
[2025-06-04 08:00:45] 2025-06-04 06:00:13,327 | INFO     | 
[2025-06-04 08:00:45] 2025-06-04 06:00:13,328 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | job 6678071037 has completed (purged errors)
[2025-06-04 08:00:45] 2025-06-04 06:00:13,341 | INFO     | overall cleanup function is called
[2025-06-04 08:00:45] 2025-06-04 06:00:14,348 | INFO     | --- collectZombieJob: --- 10, [1709060]
[2025-06-04 08:00:45] 2025-06-04 06:00:14,348 | INFO     | zombie collector waiting for pid 1709060
[2025-06-04 08:00:45] 2025-06-04 06:00:14,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:00:45] 2025-06-04 06:00:14,348 | INFO     | collected zombie processes
[2025-06-04 08:00:45] 2025-06-04 06:00:14,348 | INFO     | will attempt to kill all subprocesses of pid=1709060
[2025-06-04 08:00:45] 2025-06-04 06:00:14,399 | INFO     | process IDs to be killed: [1709060] (in reverse order)
[2025-06-04 08:00:45] 2025-06-04 06:00:14,427 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:00:45] 2025-06-04 06:00:14,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:00:45] 2025-06-04 06:00:14,429 | INFO     | did not find any defunct processes belonging to 1709060
[2025-06-04 08:00:45] 2025-06-04 06:00:14,430 | INFO     | did not find any defunct processes belonging to 1709060
[2025-06-04 08:00:45] 2025-06-04 06:00:14,430 | INFO     | ready for new job
[2025-06-04 08:00:45] 2025-06-04 06:00:14,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:00:45] 2025-06-04 06:00:14,431 | INFO     | ***************************************
[2025-06-04 08:00:45] 2025-06-04 06:00:14,431 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-04 08:00:45] 2025-06-04 06:00:14,431 | INFO     | ***************************************
[2025-06-04 08:00:45] 2025-06-04 06:00:14,431 | INFO     | 
[2025-06-04 08:00:45] 2025-06-04 06:00:14,432 | INFO     | architecture information:
[2025-06-04 08:00:45] 2025-06-04 06:00:14,432 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:00:45] 2025-06-04 06:00:14,442 | INFO     | cat /etc/os-release:
[2025-06-04 08:00:45] NAME="CentOS Linux"
[2025-06-04 08:00:45] VERSION="7 (Core)"
[2025-06-04 08:00:45] ID="centos"
[2025-06-04 08:00:45] ID_LIKE="rhel fedora"
[2025-06-04 08:00:45] VERSION_ID="7"
[2025-06-04 08:00:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:00:45] ANSI_COLOR="0;31"
[2025-06-04 08:00:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:00:45] HOME_URL="https://www.centos.org/"
[2025-06-04 08:00:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:00:45] 
[2025-06-04 08:00:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:00:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:00:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:00:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:00:45] 
[2025-06-04 08:00:45] 2025-06-04 06:00:14,442 | INFO     | ***************************************
[2025-06-04 08:00:45] 2025-06-04 06:00:14,945 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 08:00:45] 2025-06-04 06:00:14,957 | INFO     | sufficient remaining disk space (224995049472 B)
[2025-06-04 08:00:45] 2025-06-04 06:00:14,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:00:45] 2025-06-04 06:00:14,957 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:00:45] 2025-06-04 06:00:14,957 | INFO     | update_server=False
[2025-06-04 08:00:45] 2025-06-04 06:00:14,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:00:45] 2025-06-04 06:00:14,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:00:45] 2025-06-04 06:00:14,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:00:45] 2025-06-04 06:00:15,130 | INFO     | all payload control threads have been joined
[2025-06-04 08:00:45] 2025-06-04 06:00:15,139 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:00:45] 2025-06-04 06:00:15,139 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:00:45] 2025-06-04 06:00:15,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:00:45] 2025-06-04 06:00:15,140 | INFO     | will abort loop
[2025-06-04 08:00:45] 2025-06-04 06:00:15,266 | INFO     | all data control threads have been joined
[2025-06-04 08:00:45] 2025-06-04 06:00:15,959 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:15,962 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:15,971 | INFO     | all job control threads have been joined
[2025-06-04 08:00:45] 2025-06-04 06:00:16,017 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:16,136 | INFO     | [payload] control thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:16,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:00:45] 2025-06-04 06:00:16,145 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:16,271 | INFO     | [data] control thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:16,315 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:16,344 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:16,844 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:16,975 | INFO     | [job] control thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:17,042 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:17,346 | INFO     | [job] validate thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:17,456 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:18,141 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:18,963 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:25,673 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:00:45] 2025-06-04 06:00:26,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:00:45] 2025-06-04 06:00:27,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598367381312)>', '<ExcThread(monitor, started 140597868345088)>']
[2025-06-04 08:00:45] 2025-06-04 06:00:32,921 | INFO     | all workflow threads have been joined
[2025-06-04 08:00:45] 2025-06-04 06:00:32,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:00:45] 2025-06-04 06:00:32,921 | INFO     | traces error code: 0
[2025-06-04 08:00:45] 2025-06-04 06:00:32,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:00:45] 2025-06-04 06:00:45,277 | INFO     | PID=1702451 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 08:00:45] 2025-06-04 06:00:45,278 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:00:45] 2025-06-04 06:00:45,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:00:45] 2025-06-04 06:00:45,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:00:45] 2025-06-04 06:00:45,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:00:45] 2025-06-04 06:00:45,278 | INFO     | [monitor] control thread has ended
[2025-06-04 08:00:45] 2025-06-04 06:00:45,324 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:00:45] 2025-06-04 06:00:45,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:00:45] 2025-06-04 06:00:45,329 [wrapper] pilotpid: 1702451
[2025-06-04 08:00:45] 2025-06-04 06:00:45,331 [wrapper] Pilot exit status: 0
[2025-06-04 08:00:45] 2025-06-04 06:00:45,339 [wrapper] pandaids: 6678071037
[2025-06-04 08:00:45] 2025-06-04 06:00:45,358 [wrapper] cleanup supervisor_pilot 1718933 1702452
[2025-06-04 08:00:45] 2025-06-04 06:00:45,360 [wrapper] Test setup, not cleaning
[2025-06-04 08:00:45] 2025-06-04 06:00:45,363 [wrapper] apfmon messages muted
[2025-06-04 08:00:45] 2025-06-04 06:00:45,366 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:00:45] 2025-06-04 06:00:45,368 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:00:45]  *** Error codes and diagnostics ***
[2025-06-04 08:00:45]     "exeErrorCode": 0,
[2025-06-04 08:00:45]     "exeErrorDiag": "",
[2025-06-04 08:00:45]     "pilotErrorCode": 0,
[2025-06-04 08:00:45]     "pilotErrorDiag": "",
[2025-06-04 08:00:45]  *** Listing of results directory ***
[2025-06-04 08:00:45] total 383892
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc    549845 Jun  2 11:40 pilot3.tar.gz
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:35 queuedata.json
[2025-06-04 08:00:45] -rwx------ 1 boinc boinc     37140 Jun  3 22:36 runpilot2-wrapper.sh
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc       100 Jun  4 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:00:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 07:05 run_atlas
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc       105 Jun  4 07:05 job.xml
[2025-06-04 08:00:45] -rw-r--r-- 2 boinc boinc 213823459 Jun  4 07:05 EVNT.45006593._001802.pool.root.1
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc      6923 Jun  4 07:05 init_data.xml
[2025-06-04 08:00:45] drwxrwx--x 2 boinc boinc      4096 Jun  4 07:05 shared
[2025-06-04 08:00:45] -rw-r--r-- 2 boinc boinc    564114 Jun  4 07:05 input.tar.gz
[2025-06-04 08:00:45] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:05 start_atlas.sh
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc         0 Jun  4 07:05 boinc_lockfile
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc      2524 Jun  4 07:05 pandaJob.out
[2025-06-04 08:00:45] -rw------- 1 boinc boinc    986745 Jun  4 07:06 agis_schedconf.cvmfs.json
[2025-06-04 08:00:45] -rw------- 1 boinc boinc   1603667 Jun  4 07:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:00:45] drwx------ 6 boinc boinc      4096 Jun  4 07:06 pilot3
[2025-06-04 08:00:45] -rw------- 1 boinc boinc 174235723 Jun  4 07:59 HITS.45006595._044912.pool.root.1
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc       529 Jun  4 07:59 boinc_task_state.xml
[2025-06-04 08:00:45] -rw------- 1 boinc boinc      1030 Jun  4 08:00 memory_monitor_summary.json
[2025-06-04 08:00:45] -rw------- 1 boinc boinc    215610 Jun  4 08:00 log.45006595._044912.job.log.tgz.1
[2025-06-04 08:00:45] -rw------- 1 boinc boinc      7692 Jun  4 08:00 heartbeat.json
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc      8192 Jun  4 08:00 boinc_mmap_file
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc        27 Jun  4 08:00 wrapper_checkpoint.txt
[2025-06-04 08:00:45] -rw------- 1 boinc boinc       747 Jun  4 08:00 pilotlog.txt
[2025-06-04 08:00:45] -rw------- 1 boinc boinc        95 Jun  4 08:00 pilot_heartbeat.json
[2025-06-04 08:00:45] -rw------- 1 boinc boinc    341035 Jun  4 08:00 log.45006595._044912.job.log.1
[2025-06-04 08:00:45] -rw------- 1 boinc boinc       357 Jun  4 08:00 output.list
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc       620 Jun  4 08:00 runtime_log
[2025-06-04 08:00:45] -rw------- 1 boinc boinc    573440 Jun  4 08:00 result.tar.gz
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc      8738 Jun  4 08:00 runtime_log.err
[2025-06-04 08:00:45] -rw------- 1 boinc boinc       658 Jun  4 08:00 nrpLDmyXng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZtZKDmNfdvPm.diag
[2025-06-04 08:00:45] -rw-r--r-- 1 boinc boinc     21530 Jun  4 08:00 stderr.txt
[2025-06-04 08:00:45] HITS file was successfully produced:
[2025-06-04 08:00:45] -rw------- 1 boinc boinc 174235723 Jun  4 07:59 shared/HITS.pool.root.1
[2025-06-04 08:00:45]  *** Contents of shared directory: ***
[2025-06-04 08:00:45] total 380100
[2025-06-04 08:00:45] -rw-r--r-- 2 boinc boinc 213823459 Jun  4 07:05 ATLAS.root_0
[2025-06-04 08:00:45] -rw-r--r-- 2 boinc boinc    564114 Jun  4 07:05 input.tar.gz
[2025-06-04 08:00:45] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:05 start_atlas.sh
[2025-06-04 08:00:45] -rw------- 1 boinc boinc 174235723 Jun  4 07:59 HITS.pool.root.1
[2025-06-04 08:00:45] -rw------- 1 boinc boinc    573440 Jun  4 08:00 result.tar.gz
08:00:46 (1698741): run_atlas exited; CPU time 12094.135670
08:00:46 (1698741): called boinc_finish(0)

</stderr_txt>
]]>

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