Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:08:21 (21347): wrapper (7.7.26015): starting
12:08:21 (21347): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:08:21] Arguments: --nthreads 8
[2025-06-04 12:08:21] Threads: 8
[2025-06-04 12:08:21] Checking for CVMFS
[2025-06-04 12:08:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:08:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:08:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:08:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:08:24] 2.11.2.0 32728 33056 91632 146775 3 16 24853469 25165825 4293 130560 0 17040538 99.796 19320400 2237 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 12:08:24] CVMFS is ok
[2025-06-04 12:08:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:08:24] Checking for apptainer binary...
[2025-06-04 12:08:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:08:24] Running /usr/bin/apptainer --version
[2025-06-04 12:08:24] apptainer version 1.3.2-1.el7
[2025-06-04 12:08:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:22:11] cg-vwn337.simple-grid.lan
[2025-06-04 12:22:11] apptainer works
[2025-06-04 12:22:11] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:22:11] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:22:11] Starting ATLAS job with PandaID=6678070996
[2025-06-04 12:22:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:20:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:20:05] 2025-06-04 14:19:46,028 | INFO     | extracted standard info from prmon json
[2025-06-04 16:20:05] 2025-06-04 14:19:46,028 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:20:05] 2025-06-04 14:19:46,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:20:05] 2025-06-04 14:19:46,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:20:05] 2025-06-04 14:19:46,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:20:05] 2025-06-04 14:19:46,034 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:20:05] 2025-06-04 14:19:46,035 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,037 | INFO     | sum of deviations: 67563867729.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,037 | INFO     | mean x: 1749039986.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,037 | INFO     | mean y: 2429688.735426009
[2025-06-04 16:20:05] 2025-06-04 14:19:46,037 | INFO     | -- intersect: -34363647523.5026
[2025-06-04 16:20:05] 2025-06-04 14:19:46,038 | INFO     | intersect: -34363647523.5026
[2025-06-04 16:20:05] 2025-06-04 14:19:46,038 | INFO     | chi2: 7.319595128330446
[2025-06-04 16:20:05] 2025-06-04 14:19:46,038 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 16:20:05] 2025-06-04 14:19:46,040 | INFO     | sum of deviations: 80623515749.49998
[2025-06-04 16:20:05] 2025-06-04 14:19:46,040 | INFO     | mean x: 1749039833.5
[2025-06-04 16:20:05] 2025-06-04 14:19:46,040 | INFO     | mean y: 2438314.9495412842
[2025-06-04 16:20:05] 2025-06-04 14:19:46,041 | INFO     | -- intersect: -43893331184.00362
[2025-06-04 16:20:05] 2025-06-04 14:19:46,041 | INFO     | intersect: -43893331184.00362
[2025-06-04 16:20:05] 2025-06-04 14:19:46,041 | INFO     | chi2: 6.621298838491672
[2025-06-04 16:20:05] 2025-06-04 14:19:46,041 | INFO     | current chi2=6.621298838491672 (change=9.540094466919665 %)
[2025-06-04 16:20:05] 2025-06-04 14:19:46,041 | INFO     | right removable region: 217
[2025-06-04 16:20:05] 2025-06-04 14:19:46,042 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 16:20:05] 2025-06-04 14:19:46,044 | INFO     | sum of deviations: -9744727918.000004
[2025-06-04 16:20:05] 2025-06-04 14:19:46,044 | INFO     | mean x: 1749040138.5
[2025-06-04 16:20:05] 2025-06-04 14:19:46,044 | INFO     | mean y: 2481777.642201835
[2025-06-04 16:20:05] 2025-06-04 14:19:46,044 | INFO     | -- intersect: 5308035636.638252
[2025-06-04 16:20:05] 2025-06-04 14:19:46,044 | INFO     | intersect: 5308035636.638252
[2025-06-04 16:20:05] 2025-06-04 14:19:46,044 | INFO     | chi2: 2.362541166178964
[2025-06-04 16:20:05] 2025-06-04 14:19:46,045 | INFO     | current chi2=2.362541166178964 (change=67.72306220825297 %)
[2025-06-04 16:20:05] 2025-06-04 14:19:46,045 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,047 | INFO     | sum of deviations: -46666429840.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,047 | INFO     | mean x: 1749040291.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,047 | INFO     | mean y: 2507664.323943662
[2025-06-04 16:20:05] 2025-06-04 14:19:46,047 | INFO     | -- intersect: 27241856993.96965
[2025-06-04 16:20:05] 2025-06-04 14:19:46,047 | INFO     | intersect: 27241856993.96965
[2025-06-04 16:20:05] 2025-06-04 14:19:46,048 | INFO     | chi2: 0.9822568666850395
[2025-06-04 16:20:05] 2025-06-04 14:19:46,048 | INFO     | current chi2=0.9822568666850395 (change=58.42371422997533 %)
[2025-06-04 16:20:05] 2025-06-04 14:19:46,048 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,050 | INFO     | sum of deviations: -44577809360.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,050 | INFO     | mean x: 1749040443.5
[2025-06-04 16:20:05] 2025-06-04 14:19:46,050 | INFO     | mean y: 2506074.8846153845
[2025-06-04 16:20:05] 2025-06-04 14:19:46,050 | INFO     | -- intersect: 27944679511.640877
[2025-06-04 16:20:05] 2025-06-04 14:19:46,050 | INFO     | intersect: 27944679511.640877
[2025-06-04 16:20:05] 2025-06-04 14:19:46,051 | INFO     | chi2: 0.9652657661083553
[2025-06-04 16:20:05] 2025-06-04 14:19:46,051 | INFO     | current chi2=0.9652657661083553 (change=1.7298021681463465 %)
[2025-06-04 16:20:05] 2025-06-04 14:19:46,051 | INFO     | left removable region: 30
[2025-06-04 16:20:05] 2025-06-04 14:19:46,051 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,053 | INFO     | sum of deviations: -8430133266.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,053 | INFO     | mean x: 1749040718.0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,053 | INFO     | mean y: 2498716.449197861
[2025-06-04 16:20:05] 2025-06-04 14:19:46,053 | INFO     | -- intersect: 7274325681.572797
[2025-06-04 16:20:05] 2025-06-04 14:19:46,053 | INFO     | intersect: 7274325681.572797
[2025-06-04 16:20:05] 2025-06-04 14:19:46,054 | INFO     | chi2: 0.09026288645507342
[2025-06-04 16:20:05] 2025-06-04 14:19:46,054 | INFO     | -- intersect: 7274325681.572797
[2025-06-04 16:20:05] 2025-06-04 14:19:46,054 | INFO     | current memory leak: -4.16 B/s (using 187 data points, chi2=0.09)
[2025-06-04 16:20:05] 2025-06-04 14:19:46,055 | INFO     | ..............................
[2025-06-04 16:20:05] 2025-06-04 14:19:46,055 | INFO     | . Timing measurements:
[2025-06-04 16:20:05] 2025-06-04 14:19:46,055 | INFO     | . get job = 0 s
[2025-06-04 16:20:05] 2025-06-04 14:19:46,055 | INFO     | . initial setup = 7 s
[2025-06-04 16:20:05] 2025-06-04 14:19:46,055 | INFO     | . payload setup = 156 s
[2025-06-04 16:20:05] 2025-06-04 14:19:46,055 | INFO     | . stage-in = 0 s
[2025-06-04 16:20:05] 2025-06-04 14:19:46,055 | INFO     | . payload execution = 13706 s
[2025-06-04 16:20:05] 2025-06-04 14:19:46,055 | INFO     | . stage-out = 1 s
[2025-06-04 16:20:05] 2025-06-04 14:19:46,056 | INFO     | . log creation = 0 s
[2025-06-04 16:20:05] 2025-06-04 14:19:46,056 | INFO     | ..............................
[2025-06-04 16:20:05] 2025-06-04 14:19:46,238 | INFO     | 
[2025-06-04 16:20:05] 2025-06-04 14:19:46,238 | INFO     | job summary report
[2025-06-04 16:20:05] 2025-06-04 14:19:46,238 | INFO     | --------------------------------------------------
[2025-06-04 16:20:05] 2025-06-04 14:19:46,238 | INFO     | PanDA job id: 6678070996
[2025-06-04 16:20:05] 2025-06-04 14:19:46,238 | INFO     | task id: 45006595
[2025-06-04 16:20:05] 2025-06-04 14:19:46,238 | INFO     | errors: (none)
[2025-06-04 16:20:05] 2025-06-04 14:19:46,238 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | pilot state: finished 
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | transexitcode: 0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | exeerrorcode: 0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | exeerrordiag: 
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | exitcode: 0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | exitmsg: OK
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | cpuconsumptiontime: 51259 s
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | nevents: 400
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | neventsw: 0
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | pid: 13713
[2025-06-04 16:20:05] 2025-06-04 14:19:46,239 | INFO     | pgrp: 13713
[2025-06-04 16:20:05] 2025-06-04 14:19:46,240 | INFO     | corecount: 8
[2025-06-04 16:20:05] 2025-06-04 14:19:46,240 | INFO     | event service: False
[2025-06-04 16:20:05] 2025-06-04 14:19:46,240 | INFO     | sizes: {0: 2404957, 1: 2405212, 12: 2405212, 23: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 66: 2405508, 76: 2405536, 77: 2405798, 87: 2405854, 13866: 2435797
[2025-06-04 16:20:05] 2025-06-04 14:19:46,240 | INFO     | --------------------------------------------------
[2025-06-04 16:20:05] 2025-06-04 14:19:46,240 | INFO     | 
[2025-06-04 16:20:05] 2025-06-04 14:19:46,240 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 16:20:05] 2025-06-04 14:19:46,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | job 6678070996 has completed (purged errors)
[2025-06-04 16:20:05] 2025-06-04 14:19:46,265 | INFO     | overall cleanup function is called
[2025-06-04 16:20:05] 2025-06-04 14:19:47,273 | INFO     | --- collectZombieJob: --- 10, [13713]
[2025-06-04 16:20:05] 2025-06-04 14:19:47,274 | INFO     | zombie collector waiting for pid 13713
[2025-06-04 16:20:05] 2025-06-04 14:19:47,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:20:05] 2025-06-04 14:19:47,274 | INFO     | collected zombie processes
[2025-06-04 16:20:05] 2025-06-04 14:19:47,274 | INFO     | will attempt to kill all subprocesses of pid=13713
[2025-06-04 16:20:05] 2025-06-04 14:19:47,372 | INFO     | process IDs to be killed: [13713] (in reverse order)
[2025-06-04 16:20:05] 2025-06-04 14:19:47,427 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:20:05] 2025-06-04 14:19:47,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:20:05] 2025-06-04 14:19:47,431 | INFO     | did not find any defunct processes belonging to 13713
[2025-06-04 16:20:05] 2025-06-04 14:19:47,434 | INFO     | did not find any defunct processes belonging to 13713
[2025-06-04 16:20:05] 2025-06-04 14:19:47,435 | INFO     | ready for new job
[2025-06-04 16:20:05] 2025-06-04 14:19:47,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:20:05] 2025-06-04 14:19:47,437 | INFO     | **************************************
[2025-06-04 16:20:05] 2025-06-04 14:19:47,437 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:20:05] 2025-06-04 14:19:47,437 | INFO     | **************************************
[2025-06-04 16:20:05] 2025-06-04 14:19:47,437 | INFO     | 
[2025-06-04 16:20:05] 2025-06-04 14:19:47,438 | INFO     | pilot is running in a VM
[2025-06-04 16:20:05] 2025-06-04 14:19:47,438 | INFO     | architecture information:
[2025-06-04 16:20:05] 2025-06-04 14:19:47,438 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:20:05] 2025-06-04 14:19:47,461 | INFO     | cat /etc/os-release:
[2025-06-04 16:20:05] NAME="CentOS Linux"
[2025-06-04 16:20:05] VERSION="7 (Core)"
[2025-06-04 16:20:05] ID="centos"
[2025-06-04 16:20:05] ID_LIKE="rhel fedora"
[2025-06-04 16:20:05] VERSION_ID="7"
[2025-06-04 16:20:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:20:05] ANSI_COLOR="0;31"
[2025-06-04 16:20:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:20:05] HOME_URL="https://www.centos.org/"
[2025-06-04 16:20:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:20:05] 
[2025-06-04 16:20:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:20:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:20:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:20:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:20:05] 
[2025-06-04 16:20:05] 2025-06-04 14:19:47,461 | INFO     | **************************************
[2025-06-04 16:20:05] 2025-06-04 14:19:47,965 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 16:20:05] 2025-06-04 14:19:47,991 | INFO     | sufficient remaining disk space (496569942016 B)
[2025-06-04 16:20:05] 2025-06-04 14:19:47,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:20:05] 2025-06-04 14:19:47,992 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:20:05] 2025-06-04 14:19:47,992 | INFO     | update_server=False
[2025-06-04 16:20:05] 2025-06-04 14:19:47,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:20:05] 2025-06-04 14:19:47,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:20:05] 2025-06-04 14:19:47,992 | INFO     | aborting loop
[2025-06-04 16:20:05] 2025-06-04 14:19:47,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:20:05] 2025-06-04 14:19:48,205 | INFO     | all data control threads have been joined
[2025-06-04 16:20:05] 2025-06-04 14:19:48,240 | INFO     | all job control threads have been joined
[2025-06-04 16:20:05] 2025-06-04 14:19:48,751 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:20:05] 2025-06-04 14:19:48,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:20:05] 2025-06-04 14:19:48,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:20:05] 2025-06-04 14:19:48,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:20:05] 2025-06-04 14:19:48,998 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:48,998 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:48,999 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:49,210 | INFO     | [data] control thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:49,247 | INFO     | [job] control thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:49,345 | INFO     | all payload control threads have been joined
[2025-06-04 16:20:05] 2025-06-04 14:19:49,601 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:50,187 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:50,260 | INFO     | [job] validate thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:50,263 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:50,352 | INFO     | [payload] control thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:50,398 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:50,402 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:50,483 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:50,947 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:51,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:20:05] 2025-06-04 14:19:55,430 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:58,837 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:20:05] 2025-06-04 14:19:59,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:20:05] 2025-06-04 14:19:59,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356859287360)>', '<ExcThread(monitor, started 140356410652416)>']
[2025-06-04 16:20:05] 2025-06-04 14:20:00,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:20:05] 2025-06-04 14:20:00,803 | INFO     | [monitor] control thread has ended
[2025-06-04 16:20:05] 2025-06-04 14:20:04,919 | INFO     | all workflow threads have been joined
[2025-06-04 16:20:05] 2025-06-04 14:20:04,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:20:05] 2025-06-04 14:20:04,920 | INFO     | traces error code: 0
[2025-06-04 16:20:05] 2025-06-04 14:20:04,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:20:05] 2025-06-04 14:20:05,197 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:20:05] 2025-06-04 14:20:05,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:20:05] 2025-06-04 14:20:05,209 [wrapper] pilotpid: 3107
[2025-06-04 16:20:05] 2025-06-04 14:20:05,212 [wrapper] Pilot exit status: 0
[2025-06-04 16:20:05] 2025-06-04 14:20:05,243 [wrapper] pandaids: 6678070996
[2025-06-04 16:20:05] 2025-06-04 14:20:05,286 [wrapper] cleanup supervisor_pilot 20303 3108
[2025-06-04 16:20:05] 2025-06-04 14:20:05,290 [wrapper] Test setup, not cleaning
[2025-06-04 16:20:05] 2025-06-04 14:20:05,295 [wrapper] apfmon messages muted
[2025-06-04 16:20:05] 2025-06-04 14:20:05,308 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:20:05] 2025-06-04 14:20:05,312 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:20:05]  *** Error codes and diagnostics ***
[2025-06-04 16:20:05]     "exeErrorCode": 0,
[2025-06-04 16:20:05]     "exeErrorDiag": "",
[2025-06-04 16:20:05]     "pilotErrorCode": 0,
[2025-06-04 16:20:05]     "pilotErrorDiag": "",
[2025-06-04 16:20:05]  *** Listing of results directory ***
[2025-06-04 16:20:05] total 392232
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:09 pilot3.tar.gz
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:33 queuedata.json
[2025-06-04 16:20:05] -rwx------. 1 boinc boinc     37140 Jun  3 22:35 runpilot2-wrapper.sh
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc       100 Jun  4 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:20:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 12:08 run_atlas
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc       105 Jun  4 12:08 job.xml
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc      6391 Jun  4 12:08 init_data.xml
[2025-06-04 16:20:05] -rw-r--r--. 2 boinc boinc 213674899 Jun  4 12:08 EVNT.45006593._001799.pool.root.1
[2025-06-04 16:20:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:08 start_atlas.sh
[2025-06-04 16:20:05] drwxrwx--x. 2 boinc boinc        68 Jun  4 12:08 shared
[2025-06-04 16:20:05] -rw-r--r--. 2 boinc boinc    508882 Jun  4 12:08 input.tar.gz
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc         0 Jun  4 12:08 boinc_lockfile
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc      2525 Jun  4 12:22 pandaJob.out
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc    986766 Jun  4 12:25 agis_schedconf.cvmfs.json
[2025-06-04 16:20:05] drwx------. 4 boinc boinc      4096 Jun  4 12:25 pilot3
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc 181000389 Jun  4 16:18 HITS.45006595._044871.pool.root.1
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc        95 Jun  4 16:18 pilot_heartbeat.json
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc       531 Jun  4 16:19 boinc_task_state.xml
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc      1016 Jun  4 16:19 memory_monitor_summary.json
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc   1598969 Jun  4 16:19 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc    383685 Jun  4 16:19 log.45006595._044871.job.log.tgz.1
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc      8192 Jun  4 16:19 boinc_mmap_file
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc        28 Jun  4 16:19 wrapper_checkpoint.txt
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc      7685 Jun  4 16:19 heartbeat.json
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc      4488 Jun  4 16:20 pilotlog.txt
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc   1196847 Jun  4 16:20 log.45006595._044871.job.log.1
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc       357 Jun  4 16:20 output.list
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:20 runtime_log
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc   1597440 Jun  4 16:20 result.tar.gz
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc      8659 Jun  4 16:20 runtime_log.err
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc       657 Jun  4 16:20 eNKKDm0Wng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmosZKDmsSCn7m.diag
[2025-06-04 16:20:05] -rw-r--r--. 1 boinc boinc     20440 Jun  4 16:20 stderr.txt
[2025-06-04 16:20:05] HITS file was successfully produced:
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc 181000389 Jun  4 16:18 shared/HITS.pool.root.1
[2025-06-04 16:20:05]  *** Contents of shared directory: ***
[2025-06-04 16:20:05] total 387504
[2025-06-04 16:20:05] -rw-r--r--. 2 boinc boinc 213674899 Jun  4 12:08 ATLAS.root_0
[2025-06-04 16:20:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:08 start_atlas.sh
[2025-06-04 16:20:05] -rw-r--r--. 2 boinc boinc    508882 Jun  4 12:08 input.tar.gz
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc 181000389 Jun  4 16:18 HITS.pool.root.1
[2025-06-04 16:20:05] -rw-------. 1 boinc boinc   1597440 Jun  4 16:20 result.tar.gz
16:20:06 (21347): run_atlas exited; CPU time 51458.977055
16:20:06 (21347): called boinc_finish(0)

</stderr_txt>
]]>

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