Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:28:14 (22536): wrapper (7.7.26015): starting
11:28:14 (22536): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:28:14] Arguments: --nthreads 8
[2025-06-04 11:28:14] Threads: 8
[2025-06-04 11:28:14] Checking for CVMFS
[2025-06-04 11:28:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:28:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:28:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:28:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:28:16] 2.11.2.0 23292 33043 89548 146775 1 16 18397102 25165825 2750 130560 0 16632006 99.826 18839489 2099 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 11:28:16] CVMFS is ok
[2025-06-04 11:28:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:28:16] Checking for apptainer binary...
[2025-06-04 11:28:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:28:16] Running /usr/bin/apptainer --version
[2025-06-04 11:28:16] apptainer version 1.3.2-1.el7
[2025-06-04 11:28:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:42:31] cg-vwn268.simple-grid.lan
[2025-06-04 14:42:31] apptainer works
[2025-06-04 14:42:31] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:42:31] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:42:31] Starting ATLAS job with PandaID=6677975678
[2025-06-04 14:42:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:21:00]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:21:00] 2025-06-04 16:42:05,529 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6677975678/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:21:00] 2025-06-04 16:42:05,530 | INFO     | extracted standard info from prmon json
[2025-06-04 21:21:00] 2025-06-04 16:42:05,530 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:21:00] 2025-06-04 16:42:05,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:21:00] 2025-06-04 16:42:05,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:21:00] 2025-06-04 16:42:05,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:21:00] 2025-06-04 16:42:05,535 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:21:00] 2025-06-04 16:42:05,536 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,537 | INFO     | sum of deviations: 90763365952.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,538 | INFO     | mean x: 1749048402.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,538 | INFO     | mean y: 2415986.547085202
[2025-06-04 21:21:00] 2025-06-04 16:42:05,538 | INFO     | -- intersect: -46164210584.92159
[2025-06-04 21:21:00] 2025-06-04 16:42:05,538 | INFO     | intersect: -46164210584.92159
[2025-06-04 21:21:00] 2025-06-04 16:42:05,538 | INFO     | chi2: 8.228294918733093
[2025-06-04 21:21:00] 2025-06-04 16:42:05,539 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 21:21:00] 2025-06-04 16:42:05,541 | INFO     | sum of deviations: 103377300758.5
[2025-06-04 21:21:00] 2025-06-04 16:42:05,541 | INFO     | mean x: 1749048249.5
[2025-06-04 21:21:00] 2025-06-04 16:42:05,541 | INFO     | mean y: 2424311.2981651374
[2025-06-04 21:21:00] 2025-06-04 16:42:05,541 | INFO     | -- intersect: -56281997899.372536
[2025-06-04 21:21:00] 2025-06-04 16:42:05,541 | INFO     | intersect: -56281997899.372536
[2025-06-04 21:21:00] 2025-06-04 16:42:05,542 | INFO     | chi2: 7.533768862779917
[2025-06-04 21:21:00] 2025-06-04 16:42:05,542 | INFO     | current chi2=7.533768862779917 (change=8.440704457152734 %)
[2025-06-04 21:21:00] 2025-06-04 16:42:05,542 | INFO     | right removable region: 217
[2025-06-04 21:21:00] 2025-06-04 16:42:05,542 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 21:21:00] 2025-06-04 16:42:05,544 | INFO     | sum of deviations: 12198147765.500002
[2025-06-04 21:21:00] 2025-06-04 16:42:05,544 | INFO     | mean x: 1749048554.5
[2025-06-04 21:21:00] 2025-06-04 16:42:05,544 | INFO     | mean y: 2468937.5733944955
[2025-06-04 21:21:00] 2025-06-04 16:42:05,544 | INFO     | -- intersect: -6638890565.02327
[2025-06-04 21:21:00] 2025-06-04 16:42:05,544 | INFO     | intersect: -6638890565.02327
[2025-06-04 21:21:00] 2025-06-04 16:42:05,545 | INFO     | chi2: 2.9823845699570692
[2025-06-04 21:21:00] 2025-06-04 16:42:05,545 | INFO     | current chi2=2.9823845699570692 (change=63.754525094048695 %)
[2025-06-04 21:21:00] 2025-06-04 16:42:05,545 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,547 | INFO     | sum of deviations: -35234831834.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,547 | INFO     | mean x: 1749048707.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,547 | INFO     | mean y: 2502274.079812207
[2025-06-04 21:21:00] 2025-06-04 16:42:05,547 | INFO     | -- intersect: 20569289028.72874
[2025-06-04 21:21:00] 2025-06-04 16:42:05,547 | INFO     | intersect: 20569289028.72874
[2025-06-04 21:21:00] 2025-06-04 16:42:05,548 | INFO     | chi2: 0.9826720282154515
[2025-06-04 21:21:00] 2025-06-04 16:42:05,548 | INFO     | current chi2=0.9826720282154515 (change=67.0507942498644 %)
[2025-06-04 21:21:00] 2025-06-04 16:42:05,548 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,550 | INFO     | sum of deviations: -38343132340.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,550 | INFO     | mean x: 1749048859.5
[2025-06-04 21:21:00] 2025-06-04 16:42:05,550 | INFO     | mean y: 2504523.673076923
[2025-06-04 21:21:00] 2025-06-04 16:42:05,550 | INFO     | -- intersect: 24036785809.164864
[2025-06-04 21:21:00] 2025-06-04 16:42:05,550 | INFO     | intersect: 24036785809.164864
[2025-06-04 21:21:00] 2025-06-04 16:42:05,551 | INFO     | chi2: 0.9414793344470495
[2025-06-04 21:21:00] 2025-06-04 16:42:05,551 | INFO     | current chi2=0.9414793344470495 (change=4.19190661641287 %)
[2025-06-04 21:21:00] 2025-06-04 16:42:05,551 | INFO     | left removable region: 30
[2025-06-04 21:21:00] 2025-06-04 16:42:05,551 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,552 | INFO     | sum of deviations: -1929055398.9999998
[2025-06-04 21:21:00] 2025-06-04 16:42:05,553 | INFO     | mean x: 1749049134.0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,553 | INFO     | mean y: 2496825.8663101606
[2025-06-04 21:21:00] 2025-06-04 16:42:05,553 | INFO     | -- intersect: 1666506649.1427164
[2025-06-04 21:21:00] 2025-06-04 16:42:05,553 | INFO     | intersect: 1666506649.1427164
[2025-06-04 21:21:00] 2025-06-04 16:42:05,553 | INFO     | chi2: 0.03853835927046772
[2025-06-04 21:21:00] 2025-06-04 16:42:05,553 | INFO     | -- intersect: 1666506649.1427164
[2025-06-04 21:21:00] 2025-06-04 16:42:05,554 | INFO     | current memory leak: -0.95 B/s (using 187 data points, chi2=0.04)
[2025-06-04 21:21:00] 2025-06-04 16:42:05,554 | INFO     | ..............................
[2025-06-04 21:21:00] 2025-06-04 16:42:05,555 | INFO     | . Timing measurements:
[2025-06-04 21:21:00] 2025-06-04 16:42:05,555 | INFO     | . get job = 0 s
[2025-06-04 21:21:00] 2025-06-04 16:42:05,555 | INFO     | . initial setup = 10 s
[2025-06-04 21:21:00] 2025-06-04 16:42:05,555 | INFO     | . payload setup = 158 s
[2025-06-04 21:21:00] 2025-06-04 16:42:05,555 | INFO     | . stage-in = 0 s
[2025-06-04 21:21:00] 2025-06-04 16:42:05,555 | INFO     | . payload execution = 13748 s
[2025-06-04 21:21:00] 2025-06-04 16:42:05,555 | INFO     | . stage-out = 3 s
[2025-06-04 21:21:00] 2025-06-04 16:42:05,555 | INFO     | . log creation = 1 s
[2025-06-04 21:21:00] 2025-06-04 16:42:05,555 | INFO     | ..............................
[2025-06-04 21:21:00] 2025-06-04 16:42:05,772 | INFO     | 
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | job summary report
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | --------------------------------------------------
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | PanDA job id: 6677975678
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | task id: 45006595
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | errors: (none)
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | pilot state: finished 
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | transexitcode: 0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | exeerrorcode: 0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | exeerrordiag: 
[2025-06-04 21:21:00] 2025-06-04 16:42:05,773 | INFO     | exitcode: 0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | exitmsg: OK
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | cpuconsumptiontime: 50734 s
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | nevents: 400
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | neventsw: 0
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | pid: 15904
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | pgrp: 15904
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | corecount: 8
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | event service: False
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | sizes: {0: 2397058, 1: 2397313, 2: 2397313, 12: 2397341, 23: 2397369, 34: 2397397, 44: 2397553, 55: 2397581, 66: 2397609, 77: 2397637, 84: 2397899, 88: 2398207, 13
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | --------------------------------------------------
[2025-06-04 21:21:00] 2025-06-04 16:42:05,774 | INFO     | 
[2025-06-04 21:21:00] 2025-06-04 16:42:05,775 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-04 21:21:00] 2025-06-04 16:42:06,325 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,325 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,325 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,325 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:21:00] 2025-06-04 16:42:06,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:21:00] 2025-06-04 16:42:06,327 | INFO     | job 6677975678 has completed (purged errors)
[2025-06-04 21:21:00] 2025-06-04 16:42:06,327 | INFO     | overall cleanup function is called
[2025-06-04 21:21:00] 2025-06-04 16:42:07,336 | INFO     | --- collectZombieJob: --- 10, [15904]
[2025-06-04 21:21:00] 2025-06-04 16:42:07,336 | INFO     | zombie collector waiting for pid 15904
[2025-06-04 21:21:00] 2025-06-04 16:42:07,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:21:00] 2025-06-04 16:42:07,337 | INFO     | collected zombie processes
[2025-06-04 21:21:00] 2025-06-04 16:42:07,337 | INFO     | will attempt to kill all subprocesses of pid=15904
[2025-06-04 21:21:00] 2025-06-04 16:42:07,489 | INFO     | process IDs to be killed: [15904] (in reverse order)
[2025-06-04 21:21:00] 2025-06-04 16:42:08,280 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:21:00] 2025-06-04 16:42:08,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:21:00] 2025-06-04 16:42:08,284 | INFO     | did not find any defunct processes belonging to 15904
[2025-06-04 21:21:00] 2025-06-04 16:42:08,287 | INFO     | did not find any defunct processes belonging to 15904
[2025-06-04 21:21:00] 2025-06-04 16:42:08,288 | INFO     | ready for new job
[2025-06-04 21:21:00] 2025-06-04 16:42:08,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:21:00] 2025-06-04 16:42:08,290 | INFO     | **************************************
[2025-06-04 21:21:00] 2025-06-04 16:42:08,290 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:21:00] 2025-06-04 16:42:08,290 | INFO     | **************************************
[2025-06-04 21:21:00] 2025-06-04 16:42:08,290 | INFO     | 
[2025-06-04 21:21:00] 2025-06-04 16:42:08,291 | INFO     | pilot is running in a VM
[2025-06-04 21:21:00] 2025-06-04 16:42:08,291 | INFO     | architecture information:
[2025-06-04 21:21:00] 2025-06-04 16:42:08,303 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:21:00] 2025-06-04 16:42:08,565 | INFO     | cat /etc/os-release:
[2025-06-04 21:21:00] NAME="CentOS Linux"
[2025-06-04 21:21:00] VERSION="7 (Core)"
[2025-06-04 21:21:00] ID="centos"
[2025-06-04 21:21:00] ID_LIKE="rhel fedora"
[2025-06-04 21:21:00] VERSION_ID="7"
[2025-06-04 21:21:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:21:00] ANSI_COLOR="0;31"
[2025-06-04 21:21:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:21:00] HOME_URL="https://www.centos.org/"
[2025-06-04 21:21:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:21:00] 
[2025-06-04 21:21:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:21:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:21:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:21:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:21:00] 
[2025-06-04 21:21:00] 2025-06-04 16:42:08,565 | INFO     | **************************************
[2025-06-04 21:21:00] 2025-06-04 16:42:09,068 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-04 21:21:00] 2025-06-04 16:42:09,282 | INFO     | sufficient remaining disk space (497104715776 B)
[2025-06-04 21:21:00] 2025-06-04 16:42:09,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:21:00] 2025-06-04 16:42:09,283 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:21:00] 2025-06-04 16:42:09,283 | INFO     | update_server=False
[2025-06-04 21:21:00] 2025-06-04 16:42:09,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:21:00] 2025-06-04 16:42:09,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:21:00] 2025-06-04 16:42:09,285 | INFO     | aborting loop
[2025-06-04 21:21:00] 2025-06-04 16:42:09,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:21:00] 2025-06-04 16:42:09,299 | INFO     | all data control threads have been joined
[2025-06-04 21:21:00] 2025-06-04 16:42:09,552 | INFO     | all payload control threads have been joined
[2025-06-04 21:21:00] 2025-06-04 16:42:09,747 | INFO     | all job control threads have been joined
[2025-06-04 21:21:00] 2025-06-04 16:42:09,953 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:21:00] 2025-06-04 16:42:09,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:21:00] 2025-06-04 16:42:09,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:21:00] 2025-06-04 16:42:10,290 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:10,291 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:10,305 | INFO     | [data] control thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:10,371 | INFO     | [job] validate thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:10,476 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:10,558 | INFO     | [payload] control thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:10,565 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:10,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:21:00] 2025-06-04 16:42:10,754 | INFO     | [job] control thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:10,943 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:10,944 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:11,294 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:11,298 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:11,710 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:11,780 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:11,860 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:12,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:21:00] 2025-06-04 16:42:16,465 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:21:00] 2025-06-04 16:42:17,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140179989149504)>', '<ExcThread(monitor, started 140179260036864)>']
[2025-06-04 21:21:00] 2025-06-04 16:42:17,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:21:00] 2025-06-04 16:42:17,999 | INFO     | [monitor] control thread has ended
[2025-06-04 21:21:00] 2025-06-04 16:42:22,266 | INFO     | all workflow threads have been joined
[2025-06-04 21:21:00] 2025-06-04 16:42:22,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:21:00] 2025-06-04 16:42:22,267 | INFO     | traces error code: 0
[2025-06-04 21:21:00] 2025-06-04 16:42:22,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:21:00] 2025-06-04 16:42:22,712 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:21:00] 2025-06-04 16:42:22,822 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:21:00] 2025-06-04 16:42:22,902 [wrapper] pilotpid: 9298
[2025-06-04 21:21:00] 2025-06-04 16:42:22,969 [wrapper] Pilot exit status: 0
[2025-06-04 21:21:00] 2025-06-04 16:42:23,348 [wrapper] pandaids: 6677975678
[2025-06-04 21:21:00] 2025-06-04 16:42:24,229 [wrapper] cleanup supervisor_pilot 27987 9299
[2025-06-04 21:21:00] 2025-06-04 16:42:24,254 [wrapper] Test setup, not cleaning
[2025-06-04 21:21:00] 2025-06-04 16:42:24,324 [wrapper] apfmon messages muted
[2025-06-04 21:21:00] 2025-06-04 16:42:24,410 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:21:00] 2025-06-04 16:42:24,520 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:21:00]  *** Error codes and diagnostics ***
[2025-06-04 21:21:00]     "exeErrorCode": 0,
[2025-06-04 21:21:00]     "exeErrorDiag": "",
[2025-06-04 21:21:00]     "pilotErrorCode": 0,
[2025-06-04 21:21:00]     "pilotErrorDiag": "",
[2025-06-04 21:21:00]  *** Listing of results directory ***
[2025-06-04 21:21:00] total 396472
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:41 pilot3.tar.gz
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:47 queuedata.json
[2025-06-04 21:21:00] -rwx------. 1 boinc boinc     37140 Jun  3 20:48 runpilot2-wrapper.sh
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc       100 Jun  4 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:21:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 11:28 run_atlas
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc       105 Jun  4 11:28 job.xml
[2025-06-04 21:21:00] -rw-r--r--. 2 boinc boinc 218371827 Jun  4 11:28 EVNT.45006593._000273.pool.root.1
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc      6391 Jun  4 11:28 init_data.xml
[2025-06-04 21:21:00] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:28 start_atlas.sh
[2025-06-04 21:21:00] drwxrwx--x. 2 boinc boinc        68 Jun  4 11:28 shared
[2025-06-04 21:21:00] -rw-r--r--. 2 boinc boinc    508879 Jun  4 11:28 input.tar.gz
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc         0 Jun  4 11:28 boinc_lockfile
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc      2521 Jun  4 14:42 pandaJob.out
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc    986811 Jun  4 14:45 agis_schedconf.cvmfs.json
[2025-06-04 21:21:00] drwx------. 4 boinc boinc      4096 Jun  4 14:45 pilot3
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc 180604800 Jun  4 18:39 HITS.45006595._042770.pool.root.1
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:39 boinc_task_state.xml
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc      1014 Jun  4 18:40 memory_monitor_summary.json
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc   1598969 Jun  4 18:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc    391154 Jun  4 18:40 log.45006595._042770.job.log.tgz.1
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc        95 Jun  4 18:42 pilot_heartbeat.json
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc      7684 Jun  4 18:42 heartbeat.json
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc      4416 Jun  4 18:42 pilotlog.txt
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc   1205196 Jun  4 18:42 log.45006595._042770.job.log.1
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc       357 Jun  4 18:42 output.list
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:42 runtime_log
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc   1617920 Jun  4 18:42 result.tar.gz
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc      8659 Jun  4 18:42 runtime_log.err
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc       657 Jun  4 18:42 IsiKDmlrlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOmlKDmE2qfSm.diag
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:21 boinc_mmap_file
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:21 wrapper_checkpoint.txt
[2025-06-04 21:21:00] -rw-r--r--. 1 boinc boinc     20520 Jun  4 21:21 stderr.txt
[2025-06-04 21:21:00] HITS file was successfully produced:
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc 180604800 Jun  4 18:39 shared/HITS.pool.root.1
[2025-06-04 21:21:00]  *** Contents of shared directory: ***
[2025-06-04 21:21:00] total 391724
[2025-06-04 21:21:00] -rw-r--r--. 2 boinc boinc 218371827 Jun  4 11:28 ATLAS.root_0
[2025-06-04 21:21:00] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:28 start_atlas.sh
[2025-06-04 21:21:00] -rw-r--r--. 2 boinc boinc    508879 Jun  4 11:28 input.tar.gz
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc 180604800 Jun  4 18:39 HITS.pool.root.1
[2025-06-04 21:21:00] -rw-------. 1 boinc boinc   1617920 Jun  4 18:42 result.tar.gz
21:21:02 (22536): run_atlas exited; CPU time 50930.215009
21:21:02 (22536): called boinc_finish(0)

</stderr_txt>
]]>

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