Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:37:55 (2028052): wrapper (7.7.26015): starting
15:37:55 (2028052): wrapper: running run_atlas (--nthreads 6)
[2025-06-04 15:37:55] Arguments: --nthreads 6
[2025-06-04 15:37:55] Threads: 6
[2025-06-04 15:37:55] Checking for CVMFS
[2025-06-04 15:37:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:37:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:37:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:37:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:37:56] 2.11.5.0 385014 2102 75336 146770 1 186 49989531 52428800 864 130560 0 4569314 99.997 520516 93 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-04 15:37:56] CVMFS is ok
[2025-06-04 15:37:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:37:56] Checking for apptainer binary...
[2025-06-04 15:37:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:37:56] Running /usr/bin/apptainer --version
[2025-06-04 15:37:56] apptainer version 1.3.6-1.el9
[2025-06-04 15:37:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:37:56] testio002
[2025-06-04 15:37:56] apptainer works
[2025-06-04 15:37:56] Set ATHENA_PROC_NUMBER=6
[2025-06-04 15:37:56] Set ATHENA_CORE_NUMBER=6
[2025-06-04 15:37:56] Starting ATLAS job with PandaID=6678071146
[2025-06-04 15:37:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:34:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:34:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 16:34:30]  is_altstaged=None
[2025-06-04 16:34:30]  is_tar=False
[2025-06-04 16:34:30]  lfn=log.45006595._045008.job.log.tgz.1
[2025-06-04 16:34:30]  mtime=0
[2025-06-04 16:34:30]  protocol_id=None
[2025-06-04 16:34:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 16:34:30]  replicas=None
[2025-06-04 16:34:30]  scope=mc23_13p6TeV
[2025-06-04 16:34:30]  status=None
[2025-06-04 16:34:30]  status_code=0
[2025-06-04 16:34:30]  storage_token=
[2025-06-04 16:34:30]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6678071146/log.45006595._045008.job.log.tgz.1
[2025-06-04 16:34:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/6d/log.45006595._045008.job.log.tgz.1
[2025-06-04 16:34:30]  workdir=None
[2025-06-04 16:34:30] ]
[2025-06-04 16:34:30] 2025-06-04 07:34:07,360 | INFO     | transferring file log.45006595._045008.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6678071146/log.45006595._045008.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 16:34:30] 2025-06-04 07:34:07,360 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6678071146/log.45006595._045008.job.log.tgz.1 /var/lib/boinc/slots/2/log.45006595._045008.job
[2025-06-04 16:34:30] 2025-06-04 07:34:07,367 | INFO     | adding to output.list: log.45006595._045008.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/6d/log.45006595._045008.job.log.tg
[2025-06-04 16:34:30] 2025-06-04 07:34:07,367 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 16:34:30] 2025-06-04 07:34:07,367 | INFO     | summary of transferred files:
[2025-06-04 16:34:30] 2025-06-04 07:34:07,367 | INFO     |  -- lfn=log.45006595._045008.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 16:34:30] 2025-06-04 07:34:07,367 | INFO     | stage-out finished correctly
[2025-06-04 16:34:30] 2025-06-04 07:34:08,373 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 16:34:30] 2025-06-04 07:34:09,261 | INFO     | job 6678071146 has state=finished
[2025-06-04 16:34:30] 2025-06-04 07:34:09,261 | INFO     | preparing for final server update for job 6678071146 in state='finished'
[2025-06-04 16:34:30] 2025-06-04 07:34:10,259 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 16:34:30] 2025-06-04 07:34:10,260 | INFO     | this job has now completed (state=finished)
[2025-06-04 16:34:30] 2025-06-04 07:34:10,260 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 16:34:30] 2025-06-04 07:34:10,260 | INFO     | log transfer has been attempted: DONE
[2025-06-04 16:34:30] 2025-06-04 07:34:10,260 | INFO     | job 6678071146 has finished - writing final server update
[2025-06-04 16:34:30] 2025-06-04 07:34:10,260 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:34:30] 2025-06-04 07:34:10,261 | INFO     | executing command: lscpu
[2025-06-04 16:34:30] 2025-06-04 07:34:10,272 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:34:30] 2025-06-04 07:34:11,438 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 16:34:30] 2025-06-04 07:34:11,438 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6678071146/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:34:30] 2025-06-04 07:34:11,439 | INFO     | extracted standard info from prmon json
[2025-06-04 16:34:30] 2025-06-04 07:34:11,439 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:34:30] 2025-06-04 07:34:11,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:34:30] 2025-06-04 07:34:11,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:34:30] 2025-06-04 07:34:11,439 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:34:30] 2025-06-04 07:34:11,439 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:34:30] 2025-06-04 07:34:11,439 | INFO     | sum of square deviations: 34277852.0
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | sum of deviations: 9298136609.0
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | mean x: 1749020835.5
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | mean y: 2331764.7083333335
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | -- intersect: -474433308498.4656
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | intersect: -474433308498.4656
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | chi2: 1.590266601944587
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | -- intersect: -474433308498.4656
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | current memory leak: 271.26 B/s (using 48 data points, chi2=1.59)
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | ..............................
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | . Timing measurements:
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | . get job = 0 s
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | . initial setup = 4 s
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | . payload setup = 1 s
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | . stage-in = 0 s
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | . payload execution = 3347 s
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | . stage-out = 0 s
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | . log creation = 0 s
[2025-06-04 16:34:30] 2025-06-04 07:34:11,440 | INFO     | ..............................
[2025-06-04 16:34:30] 2025-06-04 07:34:11,467 | INFO     | 
[2025-06-04 16:34:30] 2025-06-04 07:34:11,467 | INFO     | job summary report
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | --------------------------------------------------
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | PanDA job id: 6678071146
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | task id: 45006595
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | errors: (none)
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | pilot state: finished 
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | transexitcode: 0
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | exeerrorcode: 0
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | exeerrordiag: 
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | exitcode: 0
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | exitmsg: OK
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | cpuconsumptiontime: 16078 s
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | nevents: 400
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | neventsw: 0
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | pid: 2038356
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | pgrp: 2038356
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | corecount: 6
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | event service: False
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | sizes: {0: 2405184, 1: 2405390, 10: 2405418, 3352: 2431005, 3353: 2439946, 3354: 2440002, 3357: 2440300}
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | --------------------------------------------------
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | 
[2025-06-04 16:34:30] 2025-06-04 07:34:11,468 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-04 16:34:30] 2025-06-04 07:34:11,474 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:34:30] 2025-06-04 07:34:11,475 | INFO     | job 6678071146 has completed (purged errors)
[2025-06-04 16:34:30] 2025-06-04 07:34:11,476 | INFO     | overall cleanup function is called
[2025-06-04 16:34:30] 2025-06-04 07:34:11,583 | WARNING  | process 2038356 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 16:34:30] 2025-06-04 07:34:11,606 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:34:30] 2025-06-04 07:34:11,637 | INFO     | number of running child processes to parent process 2038356: 1
[2025-06-04 16:34:30] 2025-06-04 07:34:11,637 | INFO     | maximum number of monitored processes: 6
[2025-06-04 16:34:30] 2025-06-04 07:34:11,637 | INFO     | aborting job monitoring since job object (job id=6678071146) has expired
[2025-06-04 16:34:30] 2025-06-04 07:34:12,478 | INFO     | --- collectZombieJob: --- 10, [2038356]
[2025-06-04 16:34:30] 2025-06-04 07:34:12,478 | INFO     | zombie collector waiting for pid 2038356
[2025-06-04 16:34:30] 2025-06-04 07:34:12,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:34:30] 2025-06-04 07:34:12,478 | INFO     | collected zombie processes
[2025-06-04 16:34:30] 2025-06-04 07:34:12,478 | INFO     | will attempt to kill all subprocesses of pid=2038356
[2025-06-04 16:34:30] 2025-06-04 07:34:12,512 | INFO     | process IDs to be killed: [2038356] (in reverse order)
[2025-06-04 16:34:30] 2025-06-04 07:34:12,526 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:34:30] 2025-06-04 07:34:12,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:34:30] 2025-06-04 07:34:12,528 | INFO     | did not find any defunct processes belonging to 2038356
[2025-06-04 16:34:30] 2025-06-04 07:34:12,529 | INFO     | did not find any defunct processes belonging to 2038356
[2025-06-04 16:34:30] 2025-06-04 07:34:12,529 | INFO     | ready for new job
[2025-06-04 16:34:30] 2025-06-04 07:34:12,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:34:30] 2025-06-04 07:34:12,530 | INFO     | **************************************
[2025-06-04 16:34:30] 2025-06-04 07:34:12,530 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:34:30] 2025-06-04 07:34:12,530 | INFO     | **************************************
[2025-06-04 16:34:30] 2025-06-04 07:34:12,530 | INFO     | 
[2025-06-04 16:34:30] 2025-06-04 07:34:12,531 | INFO     | architecture information:
[2025-06-04 16:34:30] 2025-06-04 07:34:12,531 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:34:30] 2025-06-04 07:34:12,535 | INFO     | cat /etc/os-release:
[2025-06-04 16:34:30] NAME="CentOS Linux"
[2025-06-04 16:34:30] VERSION="7 (Core)"
[2025-06-04 16:34:30] ID="centos"
[2025-06-04 16:34:30] ID_LIKE="rhel fedora"
[2025-06-04 16:34:30] VERSION_ID="7"
[2025-06-04 16:34:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:34:30] ANSI_COLOR="0;31"
[2025-06-04 16:34:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:34:30] HOME_URL="https://www.centos.org/"
[2025-06-04 16:34:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:34:30] 
[2025-06-04 16:34:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:34:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:34:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:34:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:34:30] 
[2025-06-04 16:34:30] 2025-06-04 07:34:12,536 | INFO     | **************************************
[2025-06-04 16:34:30] 2025-06-04 07:34:13,038 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-04 16:34:30] 2025-06-04 07:34:13,043 | INFO     | sufficient remaining disk space (293301387264 B)
[2025-06-04 16:34:30] 2025-06-04 07:34:13,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | INFO     | update_server=False
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | INFO     | aborting loop
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:34:30] 2025-06-04 07:34:13,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:34:30] 2025-06-04 07:34:13,174 | INFO     | all data control threads have been joined
[2025-06-04 16:34:30] 2025-06-04 07:34:13,983 | INFO     | all job control threads have been joined
[2025-06-04 16:34:30] 2025-06-04 07:34:14,048 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:14,049 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:14,049 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:14,075 | INFO     | all payload control threads have been joined
[2025-06-04 16:34:30] 2025-06-04 07:34:14,179 | INFO     | [data] control thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:14,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:34:30] 2025-06-04 07:34:14,506 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:14,711 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:14,988 | INFO     | [job] control thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:15,050 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:15,080 | INFO     | [payload] control thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:15,106 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:15,233 | INFO     | [job] validate thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:15,256 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:15,336 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:15,635 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:18,411 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:23,636 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:34:30] 2025-06-04 07:34:24,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:34:30] 2025-06-04 07:34:25,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600364230464)>', '<ExcThread(monitor, started 140599999043328)>']
[2025-06-04 16:34:30] 2025-06-04 07:34:26,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:34:30] 2025-06-04 07:34:26,109 | INFO     | [monitor] control thread has ended
[2025-06-04 16:34:30] 2025-06-04 07:34:30,807 | INFO     | all workflow threads have been joined
[2025-06-04 16:34:30] 2025-06-04 07:34:30,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:34:30] 2025-06-04 07:34:30,807 | INFO     | traces error code: 0
[2025-06-04 16:34:30] 2025-06-04 07:34:30,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:34:30] 2025-06-04 07:34:30,848 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:34:30] 2025-06-04 07:34:30,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:34:30] 2025-06-04 07:34:30,851 [wrapper] pilotpid: 2031774
[2025-06-04 16:34:30] 2025-06-04 07:34:30,851 [wrapper] Pilot exit status: 0
[2025-06-04 16:34:30] 2025-06-04 07:34:30,854 [wrapper] pandaids: 6678071146
[2025-06-04 16:34:30] 2025-06-04 07:34:30,862 [wrapper] cleanup supervisor_pilot 2049668 2031775
[2025-06-04 16:34:30] 2025-06-04 07:34:30,863 [wrapper] Test setup, not cleaning
[2025-06-04 16:34:30] 2025-06-04 07:34:30,863 [wrapper] apfmon messages muted
[2025-06-04 16:34:30] 2025-06-04 07:34:30,864 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:34:30] 2025-06-04 07:34:30,865 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:34:30]  *** Error codes and diagnostics ***
[2025-06-04 16:34:30]     "exeErrorCode": 0,
[2025-06-04 16:34:30]     "exeErrorDiag": "",
[2025-06-04 16:34:30]     "pilotErrorCode": 0,
[2025-06-04 16:34:30]     "pilotErrorDiag": "",
[2025-06-04 16:34:30]  *** Listing of results directory ***
[2025-06-04 16:34:30] total 394196
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc    495897 Jun  4 05:36 pilot3.tar.gz
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:38 queuedata.json
[2025-06-04 16:34:30] -rwx------. 1 boinc boinc     37140 Jun  4 05:38 runpilot2-wrapper.sh
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:34:30] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:37 run_atlas
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:37 job.xml
[2025-06-04 16:34:30] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:37 start_atlas.sh
[2025-06-04 16:34:30] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:37 shared
[2025-06-04 16:34:30] -rw-r--r--. 2 boinc boinc    508879 Jun  4 15:37 input.tar.gz
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc      9627 Jun  4 15:37 init_data.xml
[2025-06-04 16:34:30] -rw-r--r--. 2 boinc boinc 218290622 Jun  4 15:37 EVNT.45006593._001805.pool.root.1
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:37 boinc_lockfile
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc      2525 Jun  4 15:37 pandaJob.out
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc    986745 Jun  4 15:37 agis_schedconf.cvmfs.json
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc   1603667 Jun  4 15:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:34:30] drwx------. 4 boinc boinc      4096 Jun  4 15:38 pilot3
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc        95 Jun  4 16:33 pilot_heartbeat.json
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc 180249431 Jun  4 16:33 HITS.45006595._045008.pool.root.1
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc      1027 Jun  4 16:34 memory_monitor_summary.json
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc    274996 Jun  4 16:34 log.45006595._045008.job.log.tgz.1
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc      7694 Jun  4 16:34 heartbeat.json
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc      8192 Jun  4 16:34 boinc_mmap_file
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc        27 Jun  4 16:34 wrapper_checkpoint.txt
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc       529 Jun  4 16:34 boinc_task_state.xml
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc      4549 Jun  4 16:34 pilotlog.txt
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc    368519 Jun  4 16:34 log.45006595._045008.job.log.1
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc       357 Jun  4 16:34 output.list
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:34 runtime_log
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc    665600 Jun  4 16:34 result.tar.gz
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc      8617 Jun  4 16:34 runtime_log.err
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc       641 Jun  4 16:34 C9mKDmQang7n9Rq4apOajLDm4fhM0noT9bVof3QYDmHuZKDmGxvCMn.diag
[2025-06-04 16:34:30] -rw-r--r--. 1 boinc boinc     21017 Jun  4 16:34 stderr.txt
[2025-06-04 16:34:30] HITS file was successfully produced:
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc 180249431 Jun  4 16:33 shared/HITS.pool.root.1
[2025-06-04 16:34:30]  *** Contents of shared directory: ***
[2025-06-04 16:34:30] total 390372
[2025-06-04 16:34:30] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:37 start_atlas.sh
[2025-06-04 16:34:30] -rw-r--r--. 2 boinc boinc    508879 Jun  4 15:37 input.tar.gz
[2025-06-04 16:34:30] -rw-r--r--. 2 boinc boinc 218290622 Jun  4 15:37 ATLAS.root_0
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc 180249431 Jun  4 16:33 HITS.pool.root.1
[2025-06-04 16:34:30] -rw-------. 1 boinc boinc    665600 Jun  4 16:34 result.tar.gz
16:34:32 (2028052): run_atlas exited; CPU time 16097.800559
16:34:32 (2028052): called boinc_finish(0)

</stderr_txt>
]]>

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