Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:54:21 (1287831): wrapper (7.7.26015): starting
21:54:21 (1287831): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 21:54:21] Arguments: --nthreads 12
[2025-06-03 21:54:21] Threads: 12
[2025-06-03 21:54:21] Checking for CVMFS
[2025-06-03 21:54:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:54:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:54:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:54:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:54:21] 2.12.6.0 5533 30871 461616 146763 2 197 21485612 32935936 4069 16776704 1 127910197 99.630 117273702 31745 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 21:54:21] CVMFS is ok
[2025-06-03 21:54:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:54:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:54:21] Further information can be found at the LHC@home message board.
[2025-06-03 21:54:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:54:21] Checking for apptainer binary...
[2025-06-03 21:54:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:54:21] Running /usr/bin/apptainer --version
[2025-06-03 21:54:21] apptainer version 1.4.1-1.el9
[2025-06-03 21:54:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:54:22] c6-2-29-3.aglt2.org
[2025-06-03 21:54:22] apptainer works
[2025-06-03 21:54:22] Set ATHENA_PROC_NUMBER=12
[2025-06-03 21:54:22] Set ATHENA_CORE_NUMBER=12
[2025-06-03 21:54:22] Starting ATLAS job with PandaID=6678070981
[2025-06-03 21:54:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:32:00]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:32:00]  is_altstaged=None
[2025-06-03 22:32:00]  is_tar=False
[2025-06-03 22:32:00]  lfn=log.45006595._044856.job.log.tgz.1
[2025-06-03 22:32:00]  mtime=0
[2025-06-03 22:32:00]  protocol_id=None
[2025-06-03 22:32:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 22:32:00]  replicas=None
[2025-06-03 22:32:00]  scope=mc23_13p6TeV
[2025-06-03 22:32:00]  status=None
[2025-06-03 22:32:00]  status_code=0
[2025-06-03 22:32:00]  storage_token=
[2025-06-03 22:32:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678070981/log.45006595._044856.job.log.tgz.1
[2025-06-03 22:32:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/53/log.45006595._044856.job.log.tgz.1
[2025-06-03 22:32:00]  workdir=None
[2025-06-03 22:32:00] ]
[2025-06-03 22:32:00] 2025-06-04 02:31:32,919 | INFO     | transferring file log.45006595._044856.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678070981/log.45006595._044856.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 22:32:00] 2025-06-04 02:31:32,919 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678070981/log.45006595._044856.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._044856.job
[2025-06-03 22:32:00] 2025-06-04 02:31:32,939 | INFO     | adding to output.list: log.45006595._044856.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/53/log.45006595._044856.job.log.tg
[2025-06-03 22:32:00] 2025-06-04 02:31:32,940 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 22:32:00] 2025-06-04 02:31:32,940 | INFO     | summary of transferred files:
[2025-06-03 22:32:00] 2025-06-04 02:31:32,940 | INFO     |  -- lfn=log.45006595._044856.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 22:32:00] 2025-06-04 02:31:32,941 | INFO     | stage-out finished correctly
[2025-06-03 22:32:00] 2025-06-04 02:31:34,824 | INFO     | monitor loop #174: job 0:6678070981 is in state 'finished'
[2025-06-03 22:32:00] 2025-06-04 02:31:34,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:32:00] 2025-06-04 02:31:36,017 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 22:32:00] 2025-06-04 02:31:36,085 | INFO     | job 6678070981 has state=finished
[2025-06-03 22:32:00] 2025-06-04 02:31:36,086 | INFO     | preparing for final server update for job 6678070981 in state='finished'
[2025-06-03 22:32:00] 2025-06-04 02:31:36,086 | INFO     | this job has now completed (state=finished)
[2025-06-03 22:32:00] 2025-06-04 02:31:36,087 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 22:32:00] 2025-06-04 02:31:36,087 | INFO     | log transfer has been attempted: DONE
[2025-06-03 22:32:00] 2025-06-04 02:31:36,087 | INFO     | job 6678070981 has finished - writing final server update
[2025-06-03 22:32:00] 2025-06-04 02:31:36,087 | INFO     | total number of processed events: 400 (read)
[2025-06-03 22:32:00] 2025-06-04 02:31:36,105 | INFO     | executing command: lscpu
[2025-06-03 22:32:00] 2025-06-04 02:31:36,181 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 22:32:00] 2025-06-04 02:31:37,328 | INFO     | monitor loop #175: job 0:6678070981 is in state 'finished'
[2025-06-03 22:32:00] 2025-06-04 02:31:37,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:32:00] 2025-06-04 02:31:39,300 | INFO     | PID=1291463 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 22:32:00] 2025-06-04 02:31:39,300 | INFO     | .. there are 8 such processes running
[2025-06-03 22:32:00] 2025-06-04 02:31:39,832 | INFO     | monitor loop #176: job 0:6678070981 is in state 'finished'
[2025-06-03 22:32:00] 2025-06-04 02:31:39,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:32:00] 2025-06-04 02:31:41,427 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 22:32:00] 2025-06-04 02:31:41,428 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678070981/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:32:00] 2025-06-04 02:31:41,429 | INFO     | extracted standard info from prmon json
[2025-06-03 22:32:00] 2025-06-04 02:31:41,430 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:32:00] 2025-06-04 02:31:41,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:32:00] 2025-06-04 02:31:41,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:32:00] 2025-06-04 02:31:41,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:32:00] 2025-06-04 02:31:41,432 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:32:00] 2025-06-04 02:31:41,433 | INFO     | sum of square deviations: 7553630.0
[2025-06-03 22:32:00] 2025-06-04 02:31:41,433 | INFO     | sum of deviations: 2402017191.0
[2025-06-03 22:32:00] 2025-06-04 02:31:41,433 | INFO     | mean x: 1749003262.0
[2025-06-03 22:32:00] 2025-06-04 02:31:41,433 | INFO     | mean y: 2328887.0
[2025-06-03 22:32:00] 2025-06-04 02:31:41,433 | INFO     | -- intersect: -556172106773.6132
[2025-06-03 22:32:00] 2025-06-04 02:31:41,434 | INFO     | intersect: -556172106773.6132
[2025-06-03 22:32:00] 2025-06-04 02:31:41,434 | INFO     | chi2: 0.4631997577734463
[2025-06-03 22:32:00] 2025-06-04 02:31:41,434 | INFO     | -- intersect: -556172106773.6132
[2025-06-03 22:32:00] 2025-06-04 02:31:41,434 | INFO     | current memory leak: 318.00 B/s (using 29 data points, chi2=0.46)
[2025-06-03 22:32:00] 2025-06-04 02:31:41,434 | INFO     | ..............................
[2025-06-03 22:32:00] 2025-06-04 02:31:41,434 | INFO     | . Timing measurements:
[2025-06-03 22:32:00] 2025-06-04 02:31:41,434 | INFO     | . get job = 0 s
[2025-06-03 22:32:00] 2025-06-04 02:31:41,435 | INFO     | . initial setup = 2 s
[2025-06-03 22:32:00] 2025-06-04 02:31:41,435 | INFO     | . payload setup = 7 s
[2025-06-03 22:32:00] 2025-06-04 02:31:41,435 | INFO     | . stage-in = 0 s
[2025-06-03 22:32:00] 2025-06-04 02:31:41,435 | INFO     | . payload execution = 2190 s
[2025-06-03 22:32:00] 2025-06-04 02:31:41,435 | INFO     | . stage-out = 0 s
[2025-06-03 22:32:00] 2025-06-04 02:31:41,435 | INFO     | . log creation = 0 s
[2025-06-03 22:32:00] 2025-06-04 02:31:41,435 | INFO     | ..............................
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | 
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | job summary report
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | --------------------------------------------------
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | PanDA job id: 6678070981
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | task id: 45006595
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | errors: (none)
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | pilot state: finished 
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | transexitcode: 0
[2025-06-03 22:32:00] 2025-06-04 02:31:41,484 | INFO     | exeerrorcode: 0
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | exeerrordiag: 
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | exitcode: 0
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | exitmsg: OK
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | cpuconsumptiontime: 19124 s
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | nevents: 400
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | neventsw: 0
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | pid: 1298341
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | pgrp: 1298341
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | corecount: 12
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | event service: False
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 11: 2405446, 2201: 2430454, 2202: 2439395, 2205: 2439579, 2211: 2439749}
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | --------------------------------------------------
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | 
[2025-06-03 22:32:00] 2025-06-04 02:31:41,485 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 22:32:00] 2025-06-04 02:31:41,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:32:00] 2025-06-04 02:31:41,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:32:00] 2025-06-04 02:31:41,513 | INFO     | job 6678070981 has completed (purged errors)
[2025-06-03 22:32:00] 2025-06-04 02:31:41,513 | INFO     | overall cleanup function is called
[2025-06-03 22:32:00] 2025-06-04 02:31:42,522 | INFO     | --- collectZombieJob: --- 10, [1298341]
[2025-06-03 22:32:00] 2025-06-04 02:31:42,522 | INFO     | zombie collector waiting for pid 1298341
[2025-06-03 22:32:00] 2025-06-04 02:31:42,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:32:00] 2025-06-04 02:31:42,523 | INFO     | collected zombie processes
[2025-06-03 22:32:00] 2025-06-04 02:31:42,523 | INFO     | will attempt to kill all subprocesses of pid=1298341
[2025-06-03 22:32:00] 2025-06-04 02:31:42,654 | INFO     | process IDs to be killed: [1298341] (in reverse order)
[2025-06-03 22:32:00] 2025-06-04 02:31:42,710 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:32:00] 2025-06-04 02:31:42,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:32:00] 2025-06-04 02:31:42,722 | INFO     | did not find any defunct processes belonging to 1298341
[2025-06-03 22:32:00] 2025-06-04 02:31:42,728 | INFO     | did not find any defunct processes belonging to 1298341
[2025-06-03 22:32:00] 2025-06-04 02:31:42,728 | INFO     | ready for new job
[2025-06-03 22:32:00] 2025-06-04 02:31:42,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:32:00] 2025-06-04 02:31:42,729 | INFO     | **************************************
[2025-06-03 22:32:00] 2025-06-04 02:31:42,729 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:32:00] 2025-06-04 02:31:42,729 | INFO     | **************************************
[2025-06-03 22:32:00] 2025-06-04 02:31:42,729 | INFO     | 
[2025-06-03 22:32:00] 2025-06-04 02:31:42,742 | INFO     | architecture information:
[2025-06-03 22:32:00] 2025-06-04 02:31:42,743 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:32:00] 2025-06-04 02:31:42,757 | INFO     | cat /etc/os-release:
[2025-06-03 22:32:00] NAME="CentOS Linux"
[2025-06-03 22:32:00] VERSION="7 (Core)"
[2025-06-03 22:32:00] ID="centos"
[2025-06-03 22:32:00] ID_LIKE="rhel fedora"
[2025-06-03 22:32:00] VERSION_ID="7"
[2025-06-03 22:32:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:32:00] ANSI_COLOR="0;31"
[2025-06-03 22:32:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:32:00] HOME_URL="https://www.centos.org/"
[2025-06-03 22:32:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:32:00] 
[2025-06-03 22:32:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:32:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:32:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:32:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:32:00] 
[2025-06-03 22:32:00] 2025-06-04 02:31:42,757 | INFO     | **************************************
[2025-06-03 22:32:00] 2025-06-04 02:31:43,260 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 22:32:00] 2025-06-04 02:31:43,281 | INFO     | sufficient remaining disk space (76373032960 B)
[2025-06-03 22:32:00] 2025-06-04 02:31:43,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:32:00] 2025-06-04 02:31:43,281 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:32:00] 2025-06-04 02:31:43,281 | INFO     | update_server=False
[2025-06-03 22:32:00] 2025-06-04 02:31:43,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:32:00] 2025-06-04 02:31:43,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:32:00] 2025-06-04 02:31:43,311 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:32:00] 2025-06-04 02:31:43,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:32:00] 2025-06-04 02:31:43,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:32:00] 2025-06-04 02:31:43,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:32:00] 2025-06-04 02:31:43,341 | INFO     | aborting loop
[2025-06-03 22:32:00] 2025-06-04 02:31:43,422 | INFO     | all job control threads have been joined
[2025-06-03 22:32:00] 2025-06-04 02:31:43,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:32:00] 2025-06-04 02:31:43,801 | INFO     | all payload control threads have been joined
[2025-06-03 22:32:00] 2025-06-04 02:31:43,817 | INFO     | all data control threads have been joined
[2025-06-03 22:32:00] 2025-06-04 02:31:44,287 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:44,288 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:44,346 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:44,424 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:44,428 | INFO     | [job] control thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:44,604 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:44,807 | INFO     | [payload] control thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:44,823 | INFO     | [data] control thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:44,850 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:45,192 | INFO     | [job] validate thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:45,224 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:45,281 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:45,448 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:45,504 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:46,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:32:00] 2025-06-04 02:31:50,600 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:53,812 | INFO     | job.realtimelogging is not enabled
[2025-06-03 22:32:00] 2025-06-04 02:31:54,817 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:32:00] 2025-06-04 02:31:55,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140056043530048)>', '<ExcThread(monitor, started 140055192532736)>']
[2025-06-03 22:32:00] 2025-06-04 02:31:55,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:32:00] 2025-06-04 02:31:55,373 | INFO     | [monitor] control thread has ended
[2025-06-03 22:32:00] 2025-06-04 02:32:00,059 | INFO     | all workflow threads have been joined
[2025-06-03 22:32:00] 2025-06-04 02:32:00,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:32:00] 2025-06-04 02:32:00,060 | INFO     | traces error code: 0
[2025-06-03 22:32:00] 2025-06-04 02:32:00,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:32:00] 2025-06-04 02:32:00,151 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:32:00] 2025-06-04 02:32:00,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:32:00] 2025-06-04 02:32:00,159 [wrapper] pilotpid: 1291463
[2025-06-03 22:32:00] 2025-06-04 02:32:00,163 [wrapper] Pilot exit status: 0
[2025-06-03 22:32:00] 2025-06-04 02:32:00,177 [wrapper] pandaids: 6678070981
[2025-06-03 22:32:00] 2025-06-04 02:32:00,219 [wrapper] cleanup supervisor_pilot 1349031 1291464
[2025-06-03 22:32:00] 2025-06-04 02:32:00,224 [wrapper] Test setup, not cleaning
[2025-06-03 22:32:00] 2025-06-04 02:32:00,226 [wrapper] apfmon messages muted
[2025-06-03 22:32:00] 2025-06-04 02:32:00,230 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:32:00] 2025-06-04 02:32:00,234 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:32:00]  *** Error codes and diagnostics ***
[2025-06-03 22:32:00]     "exeErrorCode": 0,
[2025-06-03 22:32:00]     "exeErrorDiag": "",
[2025-06-03 22:32:00]     "pilotErrorCode": 0,
[2025-06-03 22:32:00]     "pilotErrorDiag": "",
[2025-06-03 22:32:00]  *** Listing of results directory ***
[2025-06-03 22:32:00] total 390992
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 16:09 pilot3.tar.gz
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 16:33 queuedata.json
[2025-06-03 22:32:00] -rwx------. 1 boincer umatlas     37140 Jun  3 16:35 runpilot2-wrapper.sh
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas       100 Jun  3 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:32:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 21:54 run_atlas
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas       105 Jun  3 21:54 job.xml
[2025-06-03 22:32:00] -rw-r--r--. 2 boincer umatlas 215177128 Jun  3 21:54 EVNT.45006593._001798.pool.root.1
[2025-06-03 22:32:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:54 start_atlas.sh
[2025-06-03 22:32:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 21:54 shared
[2025-06-03 22:32:00] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 21:54 input.tar.gz
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas         0 Jun  3 21:54 boinc_lockfile
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 21:54 pandaJob.out
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas    986077 Jun  3 21:54 agis_schedconf.cvmfs.json
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:54 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:32:00] drwx------. 4 boincer umatlas      4096 Jun  3 21:54 pilot3
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas      6842 Jun  3 22:28 init_data.xml
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas        95 Jun  3 22:30 pilot_heartbeat.json
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas 180163829 Jun  3 22:31 HITS.45006595._044856.pool.root.1
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas       529 Jun  3 22:31 boinc_task_state.xml
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas      1028 Jun  3 22:31 memory_monitor_summary.json
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas    350031 Jun  3 22:31 log.45006595._044856.job.log.tgz.1
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas      7709 Jun  3 22:31 heartbeat.json
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 22:31 boinc_mmap_file
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas        27 Jun  3 22:31 wrapper_checkpoint.txt
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas      4425 Jun  3 22:32 pilotlog.txt
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas    250247 Jun  3 22:32 log.45006595._044856.job.log.1
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas       357 Jun  3 22:32 output.list
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas       620 Jun  3 22:32 runtime_log
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas    614400 Jun  3 22:32 result.tar.gz
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas      8666 Jun  3 22:32 runtime_log.err
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas       649 Jun  3 22:32 2L5NDmzWng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmasZKDm1H3DMn.diag
[2025-06-03 22:32:00] -rw-r--r--. 1 boincer umatlas     21467 Jun  3 22:32 stderr.txt
[2025-06-03 22:32:00] HITS file was successfully produced:
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas 180163829 Jun  3 22:31 shared/HITS.pool.root.1
[2025-06-03 22:32:00]  *** Contents of shared directory: ***
[2025-06-03 22:32:00] total 387204
[2025-06-03 22:32:00] -rw-r--r--. 2 boincer umatlas 215177128 Jun  3 21:54 ATLAS.root_0
[2025-06-03 22:32:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:54 start_atlas.sh
[2025-06-03 22:32:00] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 21:54 input.tar.gz
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas 180163829 Jun  3 22:31 HITS.pool.root.1
[2025-06-03 22:32:00] -rw-------. 1 boincer umatlas    614400 Jun  3 22:32 result.tar.gz
22:32:02 (1287831): run_atlas exited; CPU time 19139.090257
22:32:02 (1287831): called boinc_finish(0)

</stderr_txt>
]]>

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