Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:18:36 (1348135): wrapper (7.7.26015): starting
12:18:36 (1348135): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 12:18:36] Arguments: --nthreads 2
[2025-06-04 12:18:36] Threads: 2
[2025-06-04 12:18:36] Checking for CVMFS
[2025-06-04 12:18:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:18:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:18:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:18:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:18:36] 2.9.2.0 755054 2471 58288 146775 0 56 27966266 36864001 0 130560 0 1604432 99.990 600644 34667 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 12:18:36] CVMFS is ok
[2025-06-04 12:18:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:18:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:18:36] Further information can be found at the LHC@home message board.
[2025-06-04 12:18:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:18:36] Checking for apptainer binary...
[2025-06-04 12:18:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:18:36] Running /usr/bin/apptainer --version
[2025-06-04 12:18:37] apptainer version 1.3.6-6.1
[2025-06-04 12:18:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:18:37] thA366
[2025-06-04 12:18:37] apptainer works
[2025-06-04 12:18:37] Set ATHENA_PROC_NUMBER=2
[2025-06-04 12:18:37] Set ATHENA_CORE_NUMBER=2
[2025-06-04 12:18:37] Starting ATLAS job with PandaID=6678072135
[2025-06-04 12:18:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:09:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:09:33] 2025-06-04 12:09:20,949 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:09:33] 2025-06-04 12:09:20,949 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678072135/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:09:33] 2025-06-04 12:09:20,949 | INFO     | extracted standard info from prmon json
[2025-06-04 14:09:33] 2025-06-04 12:09:20,949 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:09:33] 2025-06-04 12:09:20,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:09:33] 2025-06-04 12:09:20,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:09:33] 2025-06-04 12:09:20,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:09:33] 2025-06-04 12:09:20,951 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:09:33] 2025-06-04 12:09:20,951 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,951 | INFO     | sum of deviations: 9800056778.5
[2025-06-04 14:09:33] 2025-06-04 12:09:20,951 | INFO     | mean x: 1749035624.5
[2025-06-04 14:09:33] 2025-06-04 12:09:20,951 | INFO     | mean y: 2272525.861111111
[2025-06-04 14:09:33] 2025-06-04 12:09:20,952 | INFO     | -- intersect: -43882595039.85267
[2025-06-04 14:09:33] 2025-06-04 12:09:20,952 | INFO     | intersect: -43882595039.85267
[2025-06-04 14:09:33] 2025-06-04 12:09:20,952 | INFO     | chi2: 1.4174803616487137
[2025-06-04 14:09:33] 2025-06-04 12:09:20,952 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,952 | INFO     | sum of deviations: 9244992677.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,952 | INFO     | mean x: 1749035472.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,952 | INFO     | mean y: 2270891.504854369
[2025-06-04 14:09:33] 2025-06-04 12:09:20,952 | INFO     | -- intersect: -47723838154.455605
[2025-06-04 14:09:33] 2025-06-04 12:09:20,952 | INFO     | intersect: -47723838154.455605
[2025-06-04 14:09:33] 2025-06-04 12:09:20,953 | INFO     | chi2: 1.4205218382307292
[2025-06-04 14:09:33] 2025-06-04 12:09:20,953 | INFO     | current chi2=1.4205218382307292 (change=-0.2145692218605305 %)
[2025-06-04 14:09:33] 2025-06-04 12:09:20,953 | INFO     | right removable region: 102
[2025-06-04 14:09:33] 2025-06-04 12:09:20,953 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,953 | INFO     | sum of deviations: -2102270694.0000002
[2025-06-04 14:09:33] 2025-06-04 12:09:20,953 | INFO     | mean x: 1749035777.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,953 | INFO     | mean y: 2306492.4368932038
[2025-06-04 14:09:33] 2025-06-04 12:09:20,953 | INFO     | -- intersect: 10855015779.256561
[2025-06-04 14:09:33] 2025-06-04 12:09:20,953 | INFO     | intersect: 10855015779.256561
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | chi2: 0.03772962913697773
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | current chi2=0.03772962913697773 (change=97.3382608918057 %)
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | sum of deviations: 114333947.00000006
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | mean x: 1749035929.5
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | mean y: 2299465.551020408
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | -- intersect: -682971764.1201081
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | intersect: -682971764.1201081
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | chi2: 0.0019139293684997316
[2025-06-04 14:09:33] 2025-06-04 12:09:20,954 | INFO     | current chi2=0.0019139293684997316 (change=94.92725104306963 %)
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | sum of square deviations: 249388862.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | sum of deviations: -178045640.99999982
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | mean x: 1749036082.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | mean y: 2300511.301075269
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | -- intersect: 1250985989.2909393
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | intersect: 1250985989.2909393
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | chi2: 0.0015001700453456076
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | current chi2=0.0015001700453456076 (change=21.618317267290628 %)
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | left removable region: 30
[2025-06-04 14:09:33] 2025-06-04 12:09:20,955 | INFO     | sum of square deviations: 115715658.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | sum of deviations: -474868225.0
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | mean x: 1749036356.5
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | mean y: 2301127.0833333335
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | -- intersect: 7179910488.053498
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | intersect: 7179910488.053498
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | chi2: 0.0010086951631819911
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | -- intersect: 7179910488.053498
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | current memory leak: -4.10 B/s (using 72 data points, chi2=0.00)
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | ..............................
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | . Timing measurements:
[2025-06-04 14:09:33] 2025-06-04 12:09:20,956 | INFO     | . get job = 0 s
[2025-06-04 14:09:33] 2025-06-04 12:09:20,957 | INFO     | . initial setup = 1 s
[2025-06-04 14:09:33] 2025-06-04 12:09:20,957 | INFO     | . payload setup = 10 s
[2025-06-04 14:09:33] 2025-06-04 12:09:20,957 | INFO     | . stage-in = 0 s
[2025-06-04 14:09:33] 2025-06-04 12:09:20,957 | INFO     | . payload execution = 6585 s
[2025-06-04 14:09:33] 2025-06-04 12:09:20,957 | INFO     | . stage-out = 0 s
[2025-06-04 14:09:33] 2025-06-04 12:09:20,957 | INFO     | . log creation = 0 s
[2025-06-04 14:09:33] 2025-06-04 12:09:20,957 | INFO     | ..............................
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | 
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | job summary report
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | --------------------------------------------------
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | PanDA job id: 6678072135
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | task id: 45006595
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | errors: (none)
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | pilot state: finished 
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | transexitcode: 0
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | exeerrorcode: 0
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | exeerrordiag: 
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | exitcode: 0
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | exitmsg: OK
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | cpuconsumptiontime: 12800 s
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | nevents: 400
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | neventsw: 0
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | pid: 1358222
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | pgrp: 1358222
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | corecount: 2
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | event service: False
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | sizes: {0: 2405187, 8: 2405393, 11: 2405421, 6599: 2432486, 6600: 2441433, 6603: 2441489, 6613: 2441787}
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | --------------------------------------------------
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | 
[2025-06-04 14:09:33] 2025-06-04 12:09:21,000 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | job 6678072135 has completed (purged errors)
[2025-06-04 14:09:33] 2025-06-04 12:09:21,012 | INFO     | overall cleanup function is called
[2025-06-04 14:09:33] 2025-06-04 12:09:22,019 | INFO     | --- collectZombieJob: --- 10, [1358222]
[2025-06-04 14:09:33] 2025-06-04 12:09:22,019 | INFO     | zombie collector waiting for pid 1358222
[2025-06-04 14:09:33] 2025-06-04 12:09:22,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:09:33] 2025-06-04 12:09:22,019 | INFO     | collected zombie processes
[2025-06-04 14:09:33] 2025-06-04 12:09:22,020 | INFO     | will attempt to kill all subprocesses of pid=1358222
[2025-06-04 14:09:33] 2025-06-04 12:09:22,053 | INFO     | process IDs to be killed: [1358222] (in reverse order)
[2025-06-04 14:09:33] 2025-06-04 12:09:22,073 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:09:33] 2025-06-04 12:09:22,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:09:33] 2025-06-04 12:09:22,074 | INFO     | did not find any defunct processes belonging to 1358222
[2025-06-04 14:09:33] 2025-06-04 12:09:22,075 | INFO     | did not find any defunct processes belonging to 1358222
[2025-06-04 14:09:33] 2025-06-04 12:09:22,075 | INFO     | ready for new job
[2025-06-04 14:09:33] 2025-06-04 12:09:22,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:09:33] 2025-06-04 12:09:22,075 | INFO     | **************************************
[2025-06-04 14:09:33] 2025-06-04 12:09:22,076 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:09:33] 2025-06-04 12:09:22,076 | INFO     | **************************************
[2025-06-04 14:09:33] 2025-06-04 12:09:22,076 | INFO     | 
[2025-06-04 14:09:33] 2025-06-04 12:09:22,076 | INFO     | architecture information:
[2025-06-04 14:09:33] 2025-06-04 12:09:22,076 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:09:33] 2025-06-04 12:09:22,084 | INFO     | cat /etc/os-release:
[2025-06-04 14:09:33] NAME="CentOS Linux"
[2025-06-04 14:09:33] VERSION="7 (Core)"
[2025-06-04 14:09:33] ID="centos"
[2025-06-04 14:09:33] ID_LIKE="rhel fedora"
[2025-06-04 14:09:33] VERSION_ID="7"
[2025-06-04 14:09:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:09:33] ANSI_COLOR="0;31"
[2025-06-04 14:09:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:09:33] HOME_URL="https://www.centos.org/"
[2025-06-04 14:09:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:09:33] 
[2025-06-04 14:09:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:09:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:09:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:09:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:09:33] 
[2025-06-04 14:09:33] 2025-06-04 12:09:22,084 | INFO     | **************************************
[2025-06-04 14:09:33] 2025-06-04 12:09:22,588 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 14:09:33] 2025-06-04 12:09:22,600 | INFO     | sufficient remaining disk space (491719229440 B)
[2025-06-04 14:09:33] 2025-06-04 12:09:22,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:09:33] 2025-06-04 12:09:22,600 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:09:33] 2025-06-04 12:09:22,600 | INFO     | update_server=False
[2025-06-04 14:09:33] 2025-06-04 12:09:22,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:09:33] 2025-06-04 12:09:22,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:09:33] 2025-06-04 12:09:22,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:09:33] 2025-06-04 12:09:22,717 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:09:33] 2025-06-04 12:09:22,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:09:33] 2025-06-04 12:09:22,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:09:33] 2025-06-04 12:09:23,323 | INFO     | all payload control threads have been joined
[2025-06-04 14:09:33] 2025-06-04 12:09:23,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:09:33] 2025-06-04 12:09:23,511 | INFO     | aborting loop
[2025-06-04 14:09:33] 2025-06-04 12:09:23,573 | INFO     | all data control threads have been joined
[2025-06-04 14:09:33] 2025-06-04 12:09:23,606 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:23,606 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:23,839 | INFO     | all job control threads have been joined
[2025-06-04 14:09:33] 2025-06-04 12:09:23,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:09:33] 2025-06-04 12:09:24,157 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:24,207 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:24,329 | INFO     | [payload] control thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:24,367 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:24,517 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:24,578 | INFO     | [data] control thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:24,675 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:24,845 | INFO     | [job] control thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:24,890 | INFO     | [job] validate thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:25,059 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:25,070 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:25,090 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:25,929 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:26,607 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:09:33] 2025-06-04 12:09:27,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673349449536)>', '<ExcThread(monitor, started 139672135137024)>']
[2025-06-04 14:09:33] 2025-06-04 12:09:28,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:09:33] 2025-06-04 12:09:28,750 | INFO     | [monitor] control thread has ended
[2025-06-04 14:09:33] 2025-06-04 12:09:32,993 | INFO     | all workflow threads have been joined
[2025-06-04 14:09:33] 2025-06-04 12:09:32,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:09:33] 2025-06-04 12:09:32,994 | INFO     | traces error code: 0
[2025-06-04 14:09:33] 2025-06-04 12:09:32,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:09:33] 2025-06-04 12:09:33,037 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:09:33] 2025-06-04 12:09:33,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:09:33] 2025-06-04 12:09:33,042 [wrapper] pilotpid: 1351760
[2025-06-04 14:09:33] 2025-06-04 12:09:33,045 [wrapper] Pilot exit status: 0
[2025-06-04 14:09:33] 2025-06-04 12:09:33,051 [wrapper] pandaids: 6678072135
[2025-06-04 14:09:33] 2025-06-04 12:09:33,065 [wrapper] cleanup supervisor_pilot 1372599 1351761
[2025-06-04 14:09:33] 2025-06-04 12:09:33,067 [wrapper] Test setup, not cleaning
[2025-06-04 14:09:33] 2025-06-04 12:09:33,069 [wrapper] apfmon messages muted
[2025-06-04 14:09:33] 2025-06-04 12:09:33,071 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:09:33] 2025-06-04 12:09:33,073 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:09:33]  *** Error codes and diagnostics ***
[2025-06-04 14:09:33]     "exeErrorCode": 0,
[2025-06-04 14:09:33]     "exeErrorDiag": "",
[2025-06-04 14:09:33]     "pilotErrorCode": 0,
[2025-06-04 14:09:33]     "pilotErrorDiag": "",
[2025-06-04 14:09:33]  *** Listing of results directory ***
[2025-06-04 14:09:33] total 387828
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:53 queuedata.json
[2025-06-04 14:09:33] -rwx------ 1 boinc boinc     37140 Jun  3 22:55 runpilot2-wrapper.sh
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:09:33] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:18 run_atlas
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:18 job.xml
[2025-06-04 14:09:33] -rw-r--r-- 2 boinc boinc 212874817 Jun  4 12:18 EVNT.45006593._001823.pool.root.1
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc      6689 Jun  4 12:18 init_data.xml
[2025-06-04 14:09:33] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:18 shared
[2025-06-04 14:09:33] -rw-r--r-- 2 boinc boinc    508885 Jun  4 12:18 input.tar.gz
[2025-06-04 14:09:33] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:18 start_atlas.sh
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:18 boinc_lockfile
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc      2525 Jun  4 12:18 pandaJob.out
[2025-06-04 14:09:33] -rw------- 1 boinc boinc    986766 Jun  4 12:18 agis_schedconf.cvmfs.json
[2025-06-04 14:09:33] -rw------- 1 boinc boinc   1603667 Jun  4 12:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:09:33] drwx------ 4 boinc boinc      4096 Jun  4 12:18 pilot3
[2025-06-04 14:09:33] -rw------- 1 boinc boinc 178678510 Jun  4 14:08 HITS.45006595._045454.pool.root.1
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc       530 Jun  4 14:08 boinc_task_state.xml
[2025-06-04 14:09:33] -rw------- 1 boinc boinc      1016 Jun  4 14:09 memory_monitor_summary.json
[2025-06-04 14:09:33] -rw------- 1 boinc boinc    237852 Jun  4 14:09 log.45006595._045454.job.log.tgz.1
[2025-06-04 14:09:33] -rw------- 1 boinc boinc        95 Jun  4 14:09 pilot_heartbeat.json
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc        27 Jun  4 14:09 wrapper_checkpoint.txt
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc      8192 Jun  4 14:09 boinc_mmap_file
[2025-06-04 14:09:33] -rw------- 1 boinc boinc      7654 Jun  4 14:09 heartbeat.json
[2025-06-04 14:09:33] -rw------- 1 boinc boinc      4357 Jun  4 14:09 pilotlog.txt
[2025-06-04 14:09:33] -rw------- 1 boinc boinc    631102 Jun  4 14:09 log.45006595._045454.job.log.1
[2025-06-04 14:09:33] -rw------- 1 boinc boinc       357 Jun  4 14:09 output.list
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc       620 Jun  4 14:09 runtime_log
[2025-06-04 14:09:33] -rw------- 1 boinc boinc    890880 Jun  4 14:09 result.tar.gz
[2025-06-04 14:09:33] -rw------- 1 boinc boinc       659 Jun  4 14:09 zCHKDmPqng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmG9lKDmveBy5n.diag
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc      8733 Jun  4 14:09 runtime_log.err
[2025-06-04 14:09:33] -rw-r--r-- 1 boinc boinc     20791 Jun  4 14:09 stderr.txt
[2025-06-04 14:09:33] HITS file was successfully produced:
[2025-06-04 14:09:33] -rw------- 1 boinc boinc 178678510 Jun  4 14:08 shared/HITS.pool.root.1
[2025-06-04 14:09:33]  *** Contents of shared directory: ***
[2025-06-04 14:09:33] total 383776
[2025-06-04 14:09:33] -rw-r--r-- 2 boinc boinc 212874817 Jun  4 12:18 ATLAS.root_0
[2025-06-04 14:09:33] -rw-r--r-- 2 boinc boinc    508885 Jun  4 12:18 input.tar.gz
[2025-06-04 14:09:33] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:18 start_atlas.sh
[2025-06-04 14:09:33] -rw------- 1 boinc boinc 178678510 Jun  4 14:08 HITS.pool.root.1
[2025-06-04 14:09:33] -rw------- 1 boinc boinc    890880 Jun  4 14:09 result.tar.gz
14:09:34 (1348135): run_atlas exited; CPU time 12827.269681
14:09:34 (1348135): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN