Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:12:41 (873932): wrapper (7.7.26015): starting
21:12:41 (873932): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:12:41] Arguments: --nthreads 8
[2025-06-03 21:12:41] Threads: 8
[2025-06-03 21:12:41] Checking for CVMFS
[2025-06-03 21:12:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:12:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:12:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:12:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:12:41] 2.12.6.0 6829 662 152004 146762 3 398 21443668 32935936 10489 16776704 0 13696477 99.903 2129161 31350 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 21:12:41] CVMFS is ok
[2025-06-03 21:12:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:12:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:12:41] Further information can be found at the LHC@home message board.
[2025-06-03 21:12:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:12:41] Checking for apptainer binary...
[2025-06-03 21:12:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:12:41] Running /usr/bin/apptainer --version
[2025-06-03 21:12:41] apptainer version 1.4.1-1.el9
[2025-06-03 21:12:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:12:42] c6-8-25-3.aglt2.org
[2025-06-03 21:12:42] apptainer works
[2025-06-03 21:12:42] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:12:42] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:12:42] Starting ATLAS job with PandaID=6677976082
[2025-06-03 21:12:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:11:12]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:11:12]  filesize=288372
[2025-06-03 22:11:12]  filetype=log
[2025-06-03 22:11:12]  guid=2d117fa1-2ead-4fbb-856a-cc574817f18c
[2025-06-03 22:11:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 22:11:12]  is_altstaged=None
[2025-06-03 22:11:12]  is_tar=False
[2025-06-03 22:11:12]  lfn=log.45006595._043057.job.log.tgz.1
[2025-06-03 22:11:12]  mtime=0
[2025-06-03 22:11:12]  protocol_id=None
[2025-06-03 22:11:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 22:11:12]  replicas=None
[2025-06-03 22:11:12]  scope=mc23_13p6TeV
[2025-06-03 22:11:12]  status=None
[2025-06-03 22:11:12]  status_code=0
[2025-06-03 22:11:12]  storage_token=
[2025-06-03 22:11:12]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677976082/log.45006595._043057.job.log.tgz.1
[2025-06-03 22:11:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/2c/log.45006595._043057.job.log.tgz.1
[2025-06-03 22:11:12]  workdir=None
[2025-06-03 22:11:12] ]
[2025-06-03 22:11:12] 2025-06-04 02:10:49,085 | INFO     | transferring file log.45006595._043057.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677976082/log.45006595._043057.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 22:11:12] 2025-06-04 02:10:49,085 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677976082/log.45006595._043057.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._043057.job
[2025-06-03 22:11:12] 2025-06-04 02:10:49,097 | INFO     | adding to output.list: log.45006595._043057.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/2c/log.45006595._043057.job.log.tg
[2025-06-03 22:11:12] 2025-06-04 02:10:49,098 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 22:11:12] 2025-06-04 02:10:49,098 | INFO     | summary of transferred files:
[2025-06-03 22:11:12] 2025-06-04 02:10:49,098 | INFO     |  -- lfn=log.45006595._043057.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 22:11:12] 2025-06-04 02:10:49,098 | INFO     | stage-out finished correctly
[2025-06-03 22:11:12] 2025-06-04 02:10:51,704 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 22:11:12] 2025-06-04 02:10:51,749 | INFO     | job 6677976082 has state=finished
[2025-06-03 22:11:12] 2025-06-04 02:10:51,749 | INFO     | preparing for final server update for job 6677976082 in state='finished'
[2025-06-03 22:11:12] 2025-06-04 02:10:51,750 | INFO     | this job has now completed (state=finished)
[2025-06-03 22:11:12] 2025-06-04 02:10:51,750 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 22:11:12] 2025-06-04 02:10:51,750 | INFO     | log transfer has been attempted: DONE
[2025-06-03 22:11:12] 2025-06-04 02:10:51,750 | INFO     | job 6677976082 has finished - writing final server update
[2025-06-03 22:11:12] 2025-06-04 02:10:51,750 | INFO     | total number of processed events: 400 (read)
[2025-06-03 22:11:12] 2025-06-04 02:10:51,767 | INFO     | executing command: lscpu
[2025-06-03 22:11:12] 2025-06-04 02:10:51,833 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 22:11:12] 2025-06-04 02:10:52,369 | WARNING  | process 884865 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 22:11:12] 2025-06-04 02:10:52,369 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677976082/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:11:12] 2025-06-04 02:10:52,549 | INFO     | number of running child processes to parent process 884865: 1
[2025-06-03 22:11:12] 2025-06-04 02:10:52,550 | INFO     | maximum number of monitored processes: 6
[2025-06-03 22:11:12] 2025-06-04 02:10:54,098 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 22:11:12] 2025-06-04 02:10:54,099 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677976082/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:11:12] 2025-06-04 02:10:54,099 | INFO     | extracted standard info from prmon json
[2025-06-03 22:11:12] 2025-06-04 02:10:54,099 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:11:12] 2025-06-04 02:10:54,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:11:12] 2025-06-04 02:10:54,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:11:12] 2025-06-04 02:10:54,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:11:12] 2025-06-04 02:10:54,100 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:11:12] 2025-06-04 02:10:54,101 | INFO     | sum of square deviations: 38744912.5
[2025-06-03 22:11:12] 2025-06-04 02:10:54,101 | INFO     | sum of deviations: 5888654306.500001
[2025-06-03 22:11:12] 2025-06-04 02:10:54,101 | INFO     | mean x: 1749001388.5
[2025-06-03 22:11:12] 2025-06-04 02:10:54,101 | INFO     | mean y: 2157861.82
[2025-06-03 22:11:12] 2025-06-04 02:10:54,101 | INFO     | -- intersect: -265820214519.71542
[2025-06-03 22:11:12] 2025-06-04 02:10:54,101 | INFO     | intersect: -265820214519.71542
[2025-06-03 22:11:12] 2025-06-04 02:10:54,101 | INFO     | chi2: 0.798414366619884
[2025-06-03 22:11:12] 2025-06-04 02:10:54,101 | INFO     | -- intersect: -265820214519.71542
[2025-06-03 22:11:12] 2025-06-04 02:10:54,101 | INFO     | current memory leak: 151.99 B/s (using 50 data points, chi2=0.80)
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | ..............................
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | . Timing measurements:
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | . get job = 0 s
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | . initial setup = 2 s
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | . payload setup = 4 s
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | . stage-in = 0 s
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | . payload execution = 3457 s
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | . stage-out = 0 s
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | . log creation = 0 s
[2025-06-03 22:11:12] 2025-06-04 02:10:54,102 | INFO     | ..............................
[2025-06-03 22:11:12] 2025-06-04 02:10:54,152 | INFO     | 
[2025-06-03 22:11:12] 2025-06-04 02:10:54,152 | INFO     | job summary report
[2025-06-03 22:11:12] 2025-06-04 02:10:54,152 | INFO     | --------------------------------------------------
[2025-06-03 22:11:12] 2025-06-04 02:10:54,152 | INFO     | PanDA job id: 6677976082
[2025-06-03 22:11:12] 2025-06-04 02:10:54,152 | INFO     | task id: 45006595
[2025-06-03 22:11:12] 2025-06-04 02:10:54,152 | INFO     | errors: (none)
[2025-06-03 22:11:12] 2025-06-04 02:10:54,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:11:12] 2025-06-04 02:10:54,152 | INFO     | pilot state: finished 
[2025-06-03 22:11:12] 2025-06-04 02:10:54,152 | INFO     | transexitcode: 0
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | exeerrorcode: 0
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | exeerrordiag: 
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | exitcode: 0
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | exitmsg: OK
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | cpuconsumptiontime: 22989 s
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | nevents: 400
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | neventsw: 0
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | pid: 884865
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | pgrp: 884865
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | corecount: 8
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | event service: False
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | sizes: {0: 2405184, 1: 2405184, 3: 2405418, 11: 2405446, 3464: 2431046, 3465: 2431045, 3466: 2440170, 3469: 2440226, 3471: 2440396}
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | --------------------------------------------------
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | 
[2025-06-03 22:11:12] 2025-06-04 02:10:54,153 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 22:11:12] 2025-06-04 02:10:54,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,168 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:11:12] 2025-06-04 02:10:54,169 | INFO     | job 6677976082 has completed (purged errors)
[2025-06-03 22:11:12] 2025-06-04 02:10:54,169 | INFO     | overall cleanup function is called
[2025-06-03 22:11:12] 2025-06-04 02:10:55,175 | INFO     | --- collectZombieJob: --- 10, [884865]
[2025-06-03 22:11:12] 2025-06-04 02:10:55,176 | INFO     | zombie collector waiting for pid 884865
[2025-06-03 22:11:12] 2025-06-04 02:10:55,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:11:12] 2025-06-04 02:10:55,176 | INFO     | collected zombie processes
[2025-06-03 22:11:12] 2025-06-04 02:10:55,176 | INFO     | will attempt to kill all subprocesses of pid=884865
[2025-06-03 22:11:12] 2025-06-04 02:10:55,344 | INFO     | process IDs to be killed: [884865] (in reverse order)
[2025-06-03 22:11:12] 2025-06-04 02:10:55,400 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:11:12] 2025-06-04 02:10:55,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:11:12] 2025-06-04 02:10:55,408 | INFO     | did not find any defunct processes belonging to 884865
[2025-06-03 22:11:12] 2025-06-04 02:10:55,415 | INFO     | did not find any defunct processes belonging to 884865
[2025-06-03 22:11:12] 2025-06-04 02:10:55,416 | INFO     | ready for new job
[2025-06-03 22:11:12] 2025-06-04 02:10:55,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:11:12] 2025-06-04 02:10:55,417 | INFO     | **************************************
[2025-06-03 22:11:12] 2025-06-04 02:10:55,417 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:11:12] 2025-06-04 02:10:55,417 | INFO     | **************************************
[2025-06-03 22:11:12] 2025-06-04 02:10:55,417 | INFO     | 
[2025-06-03 22:11:12] 2025-06-04 02:10:55,433 | INFO     | architecture information:
[2025-06-03 22:11:12] 2025-06-04 02:10:55,433 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:11:12] 2025-06-04 02:10:55,442 | INFO     | cat /etc/os-release:
[2025-06-03 22:11:12] NAME="CentOS Linux"
[2025-06-03 22:11:12] VERSION="7 (Core)"
[2025-06-03 22:11:12] ID="centos"
[2025-06-03 22:11:12] ID_LIKE="rhel fedora"
[2025-06-03 22:11:12] VERSION_ID="7"
[2025-06-03 22:11:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:11:12] ANSI_COLOR="0;31"
[2025-06-03 22:11:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:11:12] HOME_URL="https://www.centos.org/"
[2025-06-03 22:11:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:11:12] 
[2025-06-03 22:11:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:11:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:11:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:11:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:11:12] 
[2025-06-03 22:11:12] 2025-06-04 02:10:55,442 | INFO     | **************************************
[2025-06-03 22:11:12] 2025-06-04 02:10:55,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 22:11:12] 2025-06-04 02:10:55,955 | INFO     | sufficient remaining disk space (75614912512 B)
[2025-06-03 22:11:12] 2025-06-04 02:10:55,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:11:12] 2025-06-04 02:10:55,955 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:11:12] 2025-06-04 02:10:55,955 | INFO     | update_server=False
[2025-06-03 22:11:12] 2025-06-04 02:10:55,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:11:12] 2025-06-04 02:10:55,955 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:11:12] 2025-06-04 02:10:56,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:11:12] 2025-06-04 02:10:56,057 | INFO     | aborting loop
[2025-06-03 22:11:12] 2025-06-04 02:10:56,927 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:11:12] 2025-06-04 02:10:56,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:11:12] 2025-06-04 02:10:56,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:11:12] 2025-06-04 02:10:56,946 | INFO     | all payload control threads have been joined
[2025-06-03 22:11:12] 2025-06-04 02:10:56,954 | INFO     | all data control threads have been joined
[2025-06-03 22:11:12] 2025-06-04 02:10:56,959 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:56,961 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:57,025 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:57,063 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:57,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:11:12] 2025-06-04 02:10:57,324 | INFO     | [job] validate thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:57,334 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:57,407 | INFO     | all job control threads have been joined
[2025-06-03 22:11:12] 2025-06-04 02:10:57,518 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:57,585 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:57,589 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:57,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:11:12] 2025-06-04 02:10:57,952 | INFO     | [payload] control thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:57,960 | INFO     | [data] control thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:58,191 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:58,412 | INFO     | [job] control thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:10:59,162 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:11:01,761 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:11:06,309 | INFO     | job.realtimelogging is not enabled
[2025-06-03 22:11:12] 2025-06-04 02:11:07,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:11:12] 2025-06-04 02:11:07,575 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826194159424)>', '<ExcThread(monitor, started 139825839580928)>']
[2025-06-03 22:11:12] 2025-06-04 02:11:07,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:11:12] 2025-06-04 02:11:07,983 | INFO     | [monitor] control thread has ended
[2025-06-03 22:11:12] 2025-06-04 02:11:12,600 | INFO     | all workflow threads have been joined
[2025-06-03 22:11:12] 2025-06-04 02:11:12,600 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:11:12] 2025-06-04 02:11:12,601 | INFO     | traces error code: 0
[2025-06-03 22:11:12] 2025-06-04 02:11:12,601 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:11:12] 2025-06-04 02:11:12,730 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:11:12] 2025-06-04 02:11:12,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:11:12] 2025-06-04 02:11:12,733 [wrapper] pilotpid: 877687
[2025-06-03 22:11:12] 2025-06-04 02:11:12,735 [wrapper] Pilot exit status: 0
[2025-06-03 22:11:12] 2025-06-04 02:11:12,741 [wrapper] pandaids: 6677976082
[2025-06-03 22:11:12] 2025-06-04 02:11:12,779 [wrapper] cleanup supervisor_pilot 1032722 877688
[2025-06-03 22:11:12] 2025-06-04 02:11:12,780 [wrapper] Test setup, not cleaning
[2025-06-03 22:11:12] 2025-06-04 02:11:12,782 [wrapper] apfmon messages muted
[2025-06-03 22:11:12] 2025-06-04 02:11:12,784 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:11:12] 2025-06-04 02:11:12,785 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:11:12]  *** Error codes and diagnostics ***
[2025-06-03 22:11:12]     "exeErrorCode": 0,
[2025-06-03 22:11:12]     "exeErrorDiag": "",
[2025-06-03 22:11:12]     "pilotErrorCode": 0,
[2025-06-03 22:11:12]     "pilotErrorDiag": "",
[2025-06-03 22:11:12]  *** Listing of results directory ***
[2025-06-03 22:11:12] total 392064
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:02 queuedata.json
[2025-06-03 22:11:12] -rwx------. 1 boincer umatlas     37140 Jun  3 15:03 runpilot2-wrapper.sh
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas       100 Jun  3 21:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:11:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 21:12 run_atlas
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas       105 Jun  3 21:12 job.xml
[2025-06-03 22:11:12] -rw-r--r--. 2 boincer umatlas 212691221 Jun  3 21:12 EVNT.45006593._001726.pool.root.1
[2025-06-03 22:11:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:12 start_atlas.sh
[2025-06-03 22:11:12] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 21:12 shared
[2025-06-03 22:11:12] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 21:12 input.tar.gz
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas         0 Jun  3 21:12 boinc_lockfile
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 21:12 pandaJob.out
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas    986069 Jun  3 21:12 agis_schedconf.cvmfs.json
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:12 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:11:12] drwx------. 4 boincer umatlas      4096 Jun  3 21:12 pilot3
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas      6856 Jun  3 22:02 init_data.xml
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas 183658135 Jun  3 22:10 HITS.45006595._043057.pool.root.1
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas       529 Jun  3 22:10 boinc_task_state.xml
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas      1034 Jun  3 22:10 memory_monitor_summary.json
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas    288372 Jun  3 22:10 log.45006595._043057.job.log.tgz.1
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas        95 Jun  3 22:10 pilot_heartbeat.json
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas      7714 Jun  3 22:10 heartbeat.json
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 22:11 boinc_mmap_file
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas        27 Jun  3 22:11 wrapper_checkpoint.txt
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas      4425 Jun  3 22:11 pilotlog.txt
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas    353993 Jun  3 22:11 log.45006595._043057.job.log.1
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas       357 Jun  3 22:11 output.list
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas       620 Jun  3 22:11 runtime_log
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas    665600 Jun  3 22:11 result.tar.gz
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 22:11 runtime_log.err
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas       651 Jun  3 22:11 FJgNDmS6lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkplKDmTHILon.diag
[2025-06-03 22:11:12] -rw-r--r--. 1 boincer umatlas     21112 Jun  3 22:11 stderr.txt
[2025-06-03 22:11:12] HITS file was successfully produced:
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas 183658135 Jun  3 22:10 shared/HITS.pool.root.1
[2025-06-03 22:11:12]  *** Contents of shared directory: ***
[2025-06-03 22:11:12] total 388236
[2025-06-03 22:11:12] -rw-r--r--. 2 boincer umatlas 212691221 Jun  3 21:12 ATLAS.root_0
[2025-06-03 22:11:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:12 start_atlas.sh
[2025-06-03 22:11:12] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 21:12 input.tar.gz
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas 183658135 Jun  3 22:10 HITS.pool.root.1
[2025-06-03 22:11:12] -rw-------. 1 boincer umatlas    665600 Jun  3 22:11 result.tar.gz
22:11:14 (873932): run_atlas exited; CPU time 23099.625970
22:11:14 (873932): called boinc_finish(0)

</stderr_txt>
]]>

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