Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:18:08 (22395): wrapper (7.7.26015): starting
14:18:08 (22395): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:18:08] Arguments: --nthreads 8
[2025-06-04 14:18:08] Threads: 8
[2025-06-04 14:18:08] Checking for CVMFS
[2025-06-04 14:18:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:18:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:18:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:18:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:18:09] 2.11.2.0 13438 33192 89256 146780 0 159 20552534 25165825 3632 130560 0 18202252 99.814 19894570 2213 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 14:18:09] CVMFS is ok
[2025-06-04 14:18:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:18:09] Checking for apptainer binary...
[2025-06-04 14:18:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:18:09] Running /usr/bin/apptainer --version
[2025-06-04 14:18:09] apptainer version 1.3.2-1.el7
[2025-06-04 14:18:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:18:11] cg-vwn257.simple-grid.lan
[2025-06-04 14:18:11] apptainer works
[2025-06-04 14:18:11] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:18:11] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:18:11] Starting ATLAS job with PandaID=6678074207
[2025-06-04 14:18:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:05:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:05:52] 2025-06-04 16:04:30,634 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:05:52] 2025-06-04 16:04:30,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:05:52] 2025-06-04 16:04:30,634 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:05:52] 2025-06-04 16:04:30,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:05:52] 2025-06-04 16:04:30,639 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:05:52] 2025-06-04 16:04:30,640 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,642 | INFO     | sum of deviations: -38709124959.000015
[2025-06-04 18:05:52] 2025-06-04 16:04:30,642 | INFO     | mean x: 1749046267.5
[2025-06-04 18:05:52] 2025-06-04 16:04:30,642 | INFO     | mean y: 2534002.9545454546
[2025-06-04 18:05:52] 2025-06-04 16:04:30,642 | INFO     | -- intersect: 20508354845.363457
[2025-06-04 18:05:52] 2025-06-04 16:04:30,642 | INFO     | intersect: 20508354845.363457
[2025-06-04 18:05:52] 2025-06-04 16:04:30,643 | INFO     | chi2: 2.8147301447141873
[2025-06-04 18:05:52] 2025-06-04 16:04:30,643 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,645 | INFO     | sum of deviations: -22660889878.00001
[2025-06-04 18:05:52] 2025-06-04 16:04:30,646 | INFO     | mean x: 1749046115.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,646 | INFO     | mean y: 2544940.28372093
[2025-06-04 18:05:52] 2025-06-04 16:04:30,646 | INFO     | -- intersect: 12864109796.9625
[2025-06-04 18:05:52] 2025-06-04 16:04:30,646 | INFO     | intersect: 12864109796.9625
[2025-06-04 18:05:52] 2025-06-04 16:04:30,646 | INFO     | chi2: 2.055958739087668
[2025-06-04 18:05:52] 2025-06-04 16:04:30,647 | INFO     | current chi2=2.055958739087668 (change=26.957163444297656 %)
[2025-06-04 18:05:52] 2025-06-04 16:04:30,647 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 18:05:52] 2025-06-04 16:04:30,649 | INFO     | sum of deviations: -21350770552.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,649 | INFO     | mean x: 1749045962.5
[2025-06-04 18:05:52] 2025-06-04 16:04:30,649 | INFO     | mean y: 2545891.742857143
[2025-06-04 18:05:52] 2025-06-04 16:04:30,649 | INFO     | -- intersect: 13006885888.801811
[2025-06-04 18:05:52] 2025-06-04 16:04:30,649 | INFO     | intersect: 13006885888.801811
[2025-06-04 18:05:52] 2025-06-04 16:04:30,650 | INFO     | chi2: 2.0554084443982585
[2025-06-04 18:05:52] 2025-06-04 16:04:30,650 | INFO     | current chi2=2.0554084443982585 (change=0.026765843056440086 %)
[2025-06-04 18:05:52] 2025-06-04 16:04:30,650 | INFO     | right removable region: 209
[2025-06-04 18:05:52] 2025-06-04 16:04:30,651 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,652 | INFO     | sum of deviations: -80119700431.99997
[2025-06-04 18:05:52] 2025-06-04 16:04:30,653 | INFO     | mean x: 1749046420.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,653 | INFO     | mean y: 2562475.8
[2025-06-04 18:05:52] 2025-06-04 16:04:30,653 | INFO     | -- intersect: 45475838620.0648
[2025-06-04 18:05:52] 2025-06-04 16:04:30,653 | INFO     | intersect: 45475838620.0648
[2025-06-04 18:05:52] 2025-06-04 16:04:30,653 | INFO     | chi2: 1.0168514358614387
[2025-06-04 18:05:52] 2025-06-04 16:04:30,653 | INFO     | current chi2=1.0168514358614387 (change=63.873928100319134 %)
[2025-06-04 18:05:52] 2025-06-04 16:04:30,654 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 18:05:52] 2025-06-04 16:04:30,656 | INFO     | sum of deviations: -82919261028.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,656 | INFO     | mean x: 1749046572.5
[2025-06-04 18:05:52] 2025-06-04 16:04:30,656 | INFO     | mean y: 2564484.219047619
[2025-06-04 18:05:52] 2025-06-04 16:04:30,656 | INFO     | -- intersect: 50507094808.30862
[2025-06-04 18:05:52] 2025-06-04 16:04:30,656 | INFO     | intersect: 50507094808.30862
[2025-06-04 18:05:52] 2025-06-04 16:04:30,657 | INFO     | chi2: 0.9701689704756313
[2025-06-04 18:05:52] 2025-06-04 16:04:30,657 | INFO     | current chi2=0.9701689704756313 (change=4.590883558743239 %)
[2025-06-04 18:05:52] 2025-06-04 16:04:30,657 | INFO     | left removable region: 20
[2025-06-04 18:05:52] 2025-06-04 16:04:30,657 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,659 | INFO     | sum of deviations: -54550236248.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,659 | INFO     | mean x: 1749046542.0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,659 | INFO     | mean y: 2570666.8835978834
[2025-06-04 18:05:52] 2025-06-04 16:04:30,659 | INFO     | -- intersect: 45579632399.461494
[2025-06-04 18:05:52] 2025-06-04 16:04:30,659 | INFO     | intersect: 45579632399.461494
[2025-06-04 18:05:52] 2025-06-04 16:04:30,660 | INFO     | chi2: 0.17419264028557008
[2025-06-04 18:05:52] 2025-06-04 16:04:30,660 | INFO     | -- intersect: 45579632399.461494
[2025-06-04 18:05:52] 2025-06-04 16:04:30,660 | INFO     | current memory leak: -26.06 B/s (using 189 data points, chi2=0.17)
[2025-06-04 18:05:52] 2025-06-04 16:04:30,661 | INFO     | ..............................
[2025-06-04 18:05:52] 2025-06-04 16:04:30,661 | INFO     | . Timing measurements:
[2025-06-04 18:05:52] 2025-06-04 16:04:30,661 | INFO     | . get job = 0 s
[2025-06-04 18:05:52] 2025-06-04 16:04:30,661 | INFO     | . initial setup = 3 s
[2025-06-04 18:05:52] 2025-06-04 16:04:30,661 | INFO     | . payload setup = 14 s
[2025-06-04 18:05:52] 2025-06-04 16:04:30,661 | INFO     | . stage-in = 0 s
[2025-06-04 18:05:52] 2025-06-04 16:04:30,661 | INFO     | . payload execution = 13409 s
[2025-06-04 18:05:52] 2025-06-04 16:04:30,661 | INFO     | . stage-out = 3 s
[2025-06-04 18:05:52] 2025-06-04 16:04:30,662 | INFO     | . log creation = 1 s
[2025-06-04 18:05:52] 2025-06-04 16:04:30,662 | INFO     | ..............................
[2025-06-04 18:05:52] 2025-06-04 16:04:30,794 | INFO     | 
[2025-06-04 18:05:52] 2025-06-04 16:04:30,794 | INFO     | job summary report
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | --------------------------------------------------
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | PanDA job id: 6678074207
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | task id: 45006595
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | errors: (none)
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | pilot state: finished 
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | transexitcode: 0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | exeerrorcode: 0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | exeerrordiag: 
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | exitcode: 0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,795 | INFO     | exitmsg: OK
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | cpuconsumptiontime: 50177 s
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | nevents: 400
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | neventsw: 0
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | pid: 5185
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | pgrp: 5185
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | corecount: 8
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | event service: False
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | sizes: {0: 2396514, 1: 2397370, 2: 2397370, 12: 2397398, 15: 2397632, 23: 2397660, 13428: 2427378, 13432: 2436319, 13433: 2436375, 13520: 2436545}
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | --------------------------------------------------
[2025-06-04 18:05:52] 2025-06-04 16:04:30,796 | INFO     | 
[2025-06-04 18:05:52] 2025-06-04 16:04:30,797 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 18:05:52] 2025-06-04 16:04:31,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,377 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:05:52] 2025-06-04 16:04:31,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,377 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:05:52] 2025-06-04 16:04:31,377 | INFO     | job 6678074207 has completed (purged errors)
[2025-06-04 18:05:52] 2025-06-04 16:04:31,377 | INFO     | overall cleanup function is called
[2025-06-04 18:05:52] 2025-06-04 16:04:32,388 | INFO     | --- collectZombieJob: --- 10, [5185]
[2025-06-04 18:05:52] 2025-06-04 16:04:32,388 | INFO     | zombie collector waiting for pid 5185
[2025-06-04 18:05:52] 2025-06-04 16:04:32,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:05:52] 2025-06-04 16:04:32,388 | INFO     | collected zombie processes
[2025-06-04 18:05:52] 2025-06-04 16:04:32,388 | INFO     | will attempt to kill all subprocesses of pid=5185
[2025-06-04 18:05:52] 2025-06-04 16:04:32,549 | INFO     | process IDs to be killed: [5185] (in reverse order)
[2025-06-04 18:05:52] 2025-06-04 16:04:33,311 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:05:52] 2025-06-04 16:04:33,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:05:52] 2025-06-04 16:04:33,315 | INFO     | did not find any defunct processes belonging to 5185
[2025-06-04 18:05:52] 2025-06-04 16:04:33,318 | INFO     | did not find any defunct processes belonging to 5185
[2025-06-04 18:05:52] 2025-06-04 16:04:33,318 | INFO     | ready for new job
[2025-06-04 18:05:52] 2025-06-04 16:04:33,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:05:52] 2025-06-04 16:04:33,320 | INFO     | **************************************
[2025-06-04 18:05:52] 2025-06-04 16:04:33,320 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:05:52] 2025-06-04 16:04:33,320 | INFO     | **************************************
[2025-06-04 18:05:52] 2025-06-04 16:04:33,320 | INFO     | 
[2025-06-04 18:05:52] 2025-06-04 16:04:33,321 | INFO     | pilot is running in a VM
[2025-06-04 18:05:52] 2025-06-04 16:04:33,321 | INFO     | architecture information:
[2025-06-04 18:05:52] 2025-06-04 16:04:33,335 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:05:52] 2025-06-04 16:04:33,525 | INFO     | cat /etc/os-release:
[2025-06-04 18:05:52] NAME="CentOS Linux"
[2025-06-04 18:05:52] VERSION="7 (Core)"
[2025-06-04 18:05:52] ID="centos"
[2025-06-04 18:05:52] ID_LIKE="rhel fedora"
[2025-06-04 18:05:52] VERSION_ID="7"
[2025-06-04 18:05:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:05:52] ANSI_COLOR="0;31"
[2025-06-04 18:05:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:05:52] HOME_URL="https://www.centos.org/"
[2025-06-04 18:05:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:05:52] 
[2025-06-04 18:05:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:05:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:05:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:05:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:05:52] 
[2025-06-04 18:05:52] 2025-06-04 16:04:33,526 | INFO     | **************************************
[2025-06-04 18:05:52] 2025-06-04 16:04:34,030 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 18:05:52] 2025-06-04 16:04:34,252 | INFO     | sufficient remaining disk space (496701014016 B)
[2025-06-04 18:05:52] 2025-06-04 16:04:34,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:05:52] 2025-06-04 16:04:34,253 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:05:52] 2025-06-04 16:04:34,253 | INFO     | update_server=False
[2025-06-04 18:05:52] 2025-06-04 16:04:34,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:05:52] 2025-06-04 16:04:34,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:05:52] 2025-06-04 16:04:34,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:05:52] 2025-06-04 16:04:34,254 | INFO     | aborting loop
[2025-06-04 18:05:52] 2025-06-04 16:04:34,405 | INFO     | all job control threads have been joined
[2025-06-04 18:05:52] 2025-06-04 16:04:34,735 | INFO     | PID=29060 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 18:05:52] 2025-06-04 16:04:34,735 | INFO     | .. there are 9 such processes running
[2025-06-04 18:05:52] 2025-06-04 16:04:34,735 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:05:52] 2025-06-04 16:04:34,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:05:52] 2025-06-04 16:04:34,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:05:52] 2025-06-04 16:04:34,743 | INFO     | all payload control threads have been joined
[2025-06-04 18:05:52] 2025-06-04 16:04:35,259 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:35,260 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:35,310 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:35,337 | INFO     | all data control threads have been joined
[2025-06-04 18:05:52] 2025-06-04 16:04:35,411 | INFO     | [job] control thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:35,749 | INFO     | [payload] control thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:35,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:05:52] 2025-06-04 16:04:35,960 | INFO     | [job] validate thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:35,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:05:52] 2025-06-04 16:04:36,031 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:36,261 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:36,343 | INFO     | [data] control thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:36,519 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:36,596 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:36,606 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:36,744 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:36,798 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:36,819 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:39,983 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:05:52] 2025-06-04 16:04:40,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140469626754880)>', '<ExcThread(monitor, started 140469019326208)>']
[2025-06-04 18:05:52] 2025-06-04 16:04:40,772 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:05:52] 2025-06-04 16:04:40,772 | INFO     | [monitor] control thread has ended
[2025-06-04 18:05:52] 2025-06-04 16:04:45,545 | INFO     | all workflow threads have been joined
[2025-06-04 18:05:52] 2025-06-04 16:04:45,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:05:52] 2025-06-04 16:04:45,545 | INFO     | traces error code: 0
[2025-06-04 18:05:52] 2025-06-04 16:04:45,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:05:52] 2025-06-04 16:04:45,885 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:05:52] 2025-06-04 16:04:45,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:05:52] 2025-06-04 16:04:46,054 [wrapper] pilotpid: 29060
[2025-06-04 18:05:52] 2025-06-04 16:04:46,148 [wrapper] Pilot exit status: 0
[2025-06-04 18:05:52] 2025-06-04 16:04:46,613 [wrapper] pandaids: 6678074207
[2025-06-04 18:05:52] 2025-06-04 16:04:47,679 [wrapper] cleanup supervisor_pilot 17757 29061
[2025-06-04 18:05:52] 2025-06-04 16:04:47,803 [wrapper] Test setup, not cleaning
[2025-06-04 18:05:52] 2025-06-04 16:04:47,888 [wrapper] apfmon messages muted
[2025-06-04 18:05:52] 2025-06-04 16:04:48,002 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:05:52] 2025-06-04 16:04:48,051 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:05:52]  *** Error codes and diagnostics ***
[2025-06-04 18:05:52]     "exeErrorCode": 0,
[2025-06-04 18:05:52]     "exeErrorDiag": "",
[2025-06-04 18:05:52]     "pilotErrorCode": 0,
[2025-06-04 18:05:52]     "pilotErrorDiag": "",
[2025-06-04 18:05:52]  *** Listing of results directory ***
[2025-06-04 18:05:52] total 390828
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-04 18:05:52] -rwx------. 1 boinc boinc     37140 Jun  3 23:03 runpilot2-wrapper.sh
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc      5111 Jun  3 23:03 queuedata.json
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:05:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:18 run_atlas
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:18 job.xml
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc      6389 Jun  4 14:18 init_data.xml
[2025-06-04 18:05:52] -rw-r--r--. 2 boinc boinc 217286040 Jun  4 14:18 EVNT.45006593._001834.pool.root.1
[2025-06-04 18:05:52] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:18 start_atlas.sh
[2025-06-04 18:05:52] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:18 shared
[2025-06-04 18:05:52] -rw-r--r--. 2 boinc boinc    508882 Jun  4 14:18 input.tar.gz
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:18 boinc_lockfile
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc      2525 Jun  4 14:18 pandaJob.out
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc    986811 Jun  4 14:18 agis_schedconf.cvmfs.json
[2025-06-04 18:05:52] drwx------. 4 boinc boinc      4096 Jun  4 14:18 pilot3
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc 175992845 Jun  4 18:01 HITS.45006595._045720.pool.root.1
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:01 boinc_task_state.xml
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc      1030 Jun  4 18:02 memory_monitor_summary.json
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc   1598969 Jun  4 18:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc    377448 Jun  4 18:03 log.45006595._045720.job.log.tgz.1
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc        95 Jun  4 18:04 pilot_heartbeat.json
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc      7690 Jun  4 18:04 heartbeat.json
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc      4808 Jun  4 18:04 pilotlog.txt
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc   1175368 Jun  4 18:04 log.45006595._045720.job.log.1
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc       357 Jun  4 18:04 output.list
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:04 runtime_log
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc   1576960 Jun  4 18:04 result.tar.gz
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc      8659 Jun  4 18:04 runtime_log.err
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc       657 Jun  4 18:04 IDgKDmOyng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMCmKDm0s7Pvm.diag
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:05 boinc_mmap_file
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:05 wrapper_checkpoint.txt
[2025-06-04 18:05:52] -rw-r--r--. 1 boinc boinc     20550 Jun  4 18:05 stderr.txt
[2025-06-04 18:05:52] HITS file was successfully produced:
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc 175992845 Jun  4 18:01 shared/HITS.pool.root.1
[2025-06-04 18:05:52]  *** Contents of shared directory: ***
[2025-06-04 18:05:52] total 386124
[2025-06-04 18:05:52] -rw-r--r--. 2 boinc boinc 217286040 Jun  4 14:18 ATLAS.root_0
[2025-06-04 18:05:52] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:18 start_atlas.sh
[2025-06-04 18:05:52] -rw-r--r--. 2 boinc boinc    508882 Jun  4 14:18 input.tar.gz
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc 175992845 Jun  4 18:01 HITS.pool.root.1
[2025-06-04 18:05:52] -rw-------. 1 boinc boinc   1576960 Jun  4 18:04 result.tar.gz
18:05:54 (22395): run_atlas exited; CPU time 50358.427920
18:05:54 (22395): called boinc_finish(0)

</stderr_txt>
]]>

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