Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:41:52 (10986): wrapper (7.7.26015): starting
10:41:52 (10986): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:41:52] Arguments: --nthreads 8
[2025-06-04 10:41:52] Threads: 8
[2025-06-04 10:41:52] Checking for CVMFS
[2025-06-04 10:41:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:41:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:41:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:41:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:41:54] 2.11.2.0 9777 33004 90536 146773 2 59 17546972 25165825 3136 130560 0 17814962 99.871 18009898 1959 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:41:54] CVMFS is ok
[2025-06-04 10:41:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:41:54] Checking for apptainer binary...
[2025-06-04 10:41:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:41:54] Running /usr/bin/apptainer --version
[2025-06-04 10:41:54] apptainer version 1.3.2-1.el7
[2025-06-04 10:41:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:12:19] cg-vwn477.simple-grid.lan
[2025-06-04 11:12:19] apptainer works
[2025-06-04 11:12:19] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:12:19] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:12:19] Starting ATLAS job with PandaID=6678155108
[2025-06-04 11:12:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:59:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:59:05] 2025-06-04 12:58:40,414 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6678155108/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:59:05] 2025-06-04 12:58:40,415 | INFO     | extracted standard info from prmon json
[2025-06-04 14:59:05] 2025-06-04 12:58:40,415 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:59:05] 2025-06-04 12:58:40,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:59:05] 2025-06-04 12:58:40,416 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:59:05] 2025-06-04 12:58:40,416 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:59:05] 2025-06-04 12:58:40,420 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:59:05] 2025-06-04 12:58:40,423 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,424 | INFO     | sum of deviations: 63437900807.00009
[2025-06-04 14:59:05] 2025-06-04 12:58:40,424 | INFO     | mean x: 1749035412.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,424 | INFO     | mean y: 2442126.4019138757
[2025-06-04 14:59:05] 2025-06-04 12:58:40,425 | INFO     | -- intersect: -39193406005.71552
[2025-06-04 14:59:05] 2025-06-04 12:58:40,425 | INFO     | intersect: -39193406005.71552
[2025-06-04 14:59:05] 2025-06-04 12:58:40,425 | INFO     | chi2: 9.151789293937325
[2025-06-04 14:59:05] 2025-06-04 12:58:40,425 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,427 | INFO     | sum of deviations: 76757974236.5
[2025-06-04 14:59:05] 2025-06-04 12:58:40,427 | INFO     | mean x: 1749035259.5
[2025-06-04 14:59:05] 2025-06-04 12:58:40,427 | INFO     | mean y: 2452151.2107843137
[2025-06-04 14:59:05] 2025-06-04 12:58:40,427 | INFO     | -- intersect: -50996773123.6193
[2025-06-04 14:59:05] 2025-06-04 12:58:40,427 | INFO     | intersect: -50996773123.6193
[2025-06-04 14:59:05] 2025-06-04 12:58:40,428 | INFO     | chi2: 8.400674378180776
[2025-06-04 14:59:05] 2025-06-04 12:58:40,428 | INFO     | current chi2=8.400674378180776 (change=8.207301235116187 %)
[2025-06-04 14:59:05] 2025-06-04 12:58:40,428 | INFO     | right removable region: 203
[2025-06-04 14:59:05] 2025-06-04 12:58:40,428 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,430 | INFO     | sum of deviations: -11237872925.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,430 | INFO     | mean x: 1749035564.5
[2025-06-04 14:59:05] 2025-06-04 12:58:40,430 | INFO     | mean y: 2499514.3039215687
[2025-06-04 14:59:05] 2025-06-04 12:58:40,430 | INFO     | -- intersect: 7469123256.72249
[2025-06-04 14:59:05] 2025-06-04 12:58:40,430 | INFO     | intersect: 7469123256.72249
[2025-06-04 14:59:05] 2025-06-04 12:58:40,430 | INFO     | chi2: 3.7075594062502364
[2025-06-04 14:59:05] 2025-06-04 12:58:40,430 | INFO     | current chi2=3.7075594062502364 (change=59.488147211755205 %)
[2025-06-04 14:59:05] 2025-06-04 12:58:40,431 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,432 | INFO     | sum of deviations: -62447751551.99999
[2025-06-04 14:59:05] 2025-06-04 12:58:40,432 | INFO     | mean x: 1749035717.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,432 | INFO     | mean y: 2540755.2412060304
[2025-06-04 14:59:05] 2025-06-04 12:58:40,432 | INFO     | -- intersect: 44700613510.0269
[2025-06-04 14:59:05] 2025-06-04 12:58:40,433 | INFO     | intersect: 44700613510.0269
[2025-06-04 14:59:05] 2025-06-04 12:58:40,433 | INFO     | chi2: 1.229864850832754
[2025-06-04 14:59:05] 2025-06-04 12:58:40,458 | INFO     | current chi2=1.229864850832754 (change=66.82818220634746 %)
[2025-06-04 14:59:05] 2025-06-04 12:58:40,459 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 14:59:05] 2025-06-04 12:58:40,460 | INFO     | sum of deviations: -70311734912.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,460 | INFO     | mean x: 1749035869.5
[2025-06-04 14:59:05] 2025-06-04 12:58:40,460 | INFO     | mean y: 2547376.1958762887
[2025-06-04 14:59:05] 2025-06-04 12:58:40,460 | INFO     | -- intersect: 54321883812.33638
[2025-06-04 14:59:05] 2025-06-04 12:58:40,460 | INFO     | intersect: 54321883812.33638
[2025-06-04 14:59:05] 2025-06-04 12:58:40,461 | INFO     | chi2: 1.0947216397760942
[2025-06-04 14:59:05] 2025-06-04 12:58:40,461 | INFO     | current chi2=1.0947216397760942 (change=10.988460314574654 %)
[2025-06-04 14:59:05] 2025-06-04 12:58:40,461 | INFO     | left removable region: 30
[2025-06-04 14:59:05] 2025-06-04 12:58:40,461 | INFO     | sum of square deviations: 1605470102.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,462 | INFO     | sum of deviations: -40275968274.99999
[2025-06-04 14:59:05] 2025-06-04 12:58:40,462 | INFO     | mean x: 1749036144.0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,463 | INFO     | mean y: 2546832.8786127167
[2025-06-04 14:59:05] 2025-06-04 12:58:40,463 | INFO     | -- intersect: 43880115253.378746
[2025-06-04 14:59:05] 2025-06-04 12:58:40,463 | INFO     | intersect: 43880115253.378746
[2025-06-04 14:59:05] 2025-06-04 12:58:40,463 | INFO     | chi2: 0.1873824454857966
[2025-06-04 14:59:05] 2025-06-04 12:58:40,463 | INFO     | -- intersect: 43880115253.378746
[2025-06-04 14:59:05] 2025-06-04 12:58:40,463 | INFO     | current memory leak: -25.09 B/s (using 173 data points, chi2=0.19)
[2025-06-04 14:59:05] 2025-06-04 12:58:40,464 | INFO     | ..............................
[2025-06-04 14:59:05] 2025-06-04 12:58:40,464 | INFO     | . Timing measurements:
[2025-06-04 14:59:05] 2025-06-04 12:58:40,464 | INFO     | . get job = 0 s
[2025-06-04 14:59:05] 2025-06-04 12:58:40,464 | INFO     | . initial setup = 9 s
[2025-06-04 14:59:05] 2025-06-04 12:58:40,464 | INFO     | . payload setup = 187 s
[2025-06-04 14:59:05] 2025-06-04 12:58:40,464 | INFO     | . stage-in = 0 s
[2025-06-04 14:59:05] 2025-06-04 12:58:40,465 | INFO     | . payload execution = 12906 s
[2025-06-04 14:59:05] 2025-06-04 12:58:40,465 | INFO     | . stage-out = 3 s
[2025-06-04 14:59:05] 2025-06-04 12:58:40,465 | INFO     | . log creation = 1 s
[2025-06-04 14:59:05] 2025-06-04 12:58:40,465 | INFO     | ..............................
[2025-06-04 14:59:05] 2025-06-04 12:58:40,637 | INFO     | 
[2025-06-04 14:59:05] 2025-06-04 12:58:40,637 | INFO     | job summary report
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | --------------------------------------------------
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | PanDA job id: 6678155108
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | task id: 45006595
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | errors: (none)
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | pilot state: finished 
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | transexitcode: 0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | exeerrorcode: 0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | exeerrordiag: 
[2025-06-04 14:59:05] 2025-06-04 12:58:40,638 | INFO     | exitcode: 0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | exitmsg: OK
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | cpuconsumptiontime: 46979 s
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | nevents: 400
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | neventsw: 0
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | pid: 10074
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | pgrp: 10074
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | corecount: 8
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | event service: False
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405212, 12: 2405240, 23: 2405268, 34: 2405296, 45: 2405452, 55: 2405480, 66: 2405508, 77: 2405536, 87: 2405592, 95: 2406106, 98
[2025-06-04 14:59:05] 2025-06-04 12:58:40,639 | INFO     | --------------------------------------------------
[2025-06-04 14:59:05] 2025-06-04 12:58:40,640 | INFO     | 
[2025-06-04 14:59:05] 2025-06-04 12:58:40,640 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-04 14:59:05] 2025-06-04 12:58:41,244 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,244 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,244 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,244 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,244 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,244 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,245 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:59:05] 2025-06-04 12:58:41,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,246 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:59:05] 2025-06-04 12:58:41,246 | INFO     | job 6678155108 has completed (purged errors)
[2025-06-04 14:59:05] 2025-06-04 12:58:41,246 | INFO     | overall cleanup function is called
[2025-06-04 14:59:05] 2025-06-04 12:58:42,255 | INFO     | --- collectZombieJob: --- 10, [10074]
[2025-06-04 14:59:05] 2025-06-04 12:58:42,255 | INFO     | zombie collector waiting for pid 10074
[2025-06-04 14:59:05] 2025-06-04 12:58:42,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:59:05] 2025-06-04 12:58:42,256 | INFO     | collected zombie processes
[2025-06-04 14:59:05] 2025-06-04 12:58:42,256 | INFO     | will attempt to kill all subprocesses of pid=10074
[2025-06-04 14:59:05] 2025-06-04 12:58:42,370 | INFO     | process IDs to be killed: [10074] (in reverse order)
[2025-06-04 14:59:05] 2025-06-04 12:58:43,090 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:59:05] 2025-06-04 12:58:43,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:59:05] 2025-06-04 12:58:43,093 | INFO     | did not find any defunct processes belonging to 10074
[2025-06-04 14:59:05] 2025-06-04 12:58:43,096 | INFO     | did not find any defunct processes belonging to 10074
[2025-06-04 14:59:05] 2025-06-04 12:58:43,096 | INFO     | ready for new job
[2025-06-04 14:59:05] 2025-06-04 12:58:43,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:59:05] 2025-06-04 12:58:43,098 | INFO     | **************************************
[2025-06-04 14:59:05] 2025-06-04 12:58:43,098 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:59:05] 2025-06-04 12:58:43,099 | INFO     | **************************************
[2025-06-04 14:59:05] 2025-06-04 12:58:43,099 | INFO     | 
[2025-06-04 14:59:05] 2025-06-04 12:58:43,099 | INFO     | pilot is running in a VM
[2025-06-04 14:59:05] 2025-06-04 12:58:43,099 | INFO     | architecture information:
[2025-06-04 14:59:05] 2025-06-04 12:58:43,100 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:59:05] 2025-06-04 12:58:43,279 | INFO     | cat /etc/os-release:
[2025-06-04 14:59:05] NAME="CentOS Linux"
[2025-06-04 14:59:05] VERSION="7 (Core)"
[2025-06-04 14:59:05] ID="centos"
[2025-06-04 14:59:05] ID_LIKE="rhel fedora"
[2025-06-04 14:59:05] VERSION_ID="7"
[2025-06-04 14:59:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:59:05] ANSI_COLOR="0;31"
[2025-06-04 14:59:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:59:05] HOME_URL="https://www.centos.org/"
[2025-06-04 14:59:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:59:05] 
[2025-06-04 14:59:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:59:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:59:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:59:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:59:05] 
[2025-06-04 14:59:05] 2025-06-04 12:58:43,279 | INFO     | **************************************
[2025-06-04 14:59:05] 2025-06-04 12:58:43,781 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-04 14:59:05] 2025-06-04 12:58:44,033 | INFO     | sufficient remaining disk space (496809017344 B)
[2025-06-04 14:59:05] 2025-06-04 12:58:44,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:59:05] 2025-06-04 12:58:44,033 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:59:05] 2025-06-04 12:58:44,033 | INFO     | update_server=False
[2025-06-04 14:59:05] 2025-06-04 12:58:44,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:59:05] 2025-06-04 12:58:44,035 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:59:05] 2025-06-04 12:58:44,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:59:05] 2025-06-04 12:58:44,111 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:59:05] 2025-06-04 12:58:44,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:59:05] 2025-06-04 12:58:44,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:59:05] 2025-06-04 12:58:44,456 | INFO     | all data control threads have been joined
[2025-06-04 14:59:05] 2025-06-04 12:58:44,459 | INFO     | all payload control threads have been joined
[2025-06-04 14:59:05] 2025-06-04 12:58:44,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:59:05] 2025-06-04 12:58:44,674 | INFO     | aborting loop
[2025-06-04 14:59:05] 2025-06-04 12:58:45,026 | INFO     | all job control threads have been joined
[2025-06-04 14:59:05] 2025-06-04 12:58:45,039 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:45,373 | INFO     | [job] validate thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:45,461 | INFO     | [data] control thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:45,464 | INFO     | [payload] control thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:45,579 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:45,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:59:05] 2025-06-04 12:58:45,680 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:45,836 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:45,969 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:46,032 | INFO     | [job] control thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:46,047 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:46,230 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:46,274 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:46,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:46,448 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:46,657 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:48,044 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:59:05] 2025-06-04 12:58:49,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127632189248)>', '<ExcThread(monitor, started 140127066126080)>']
[2025-06-04 14:59:05] 2025-06-04 12:58:50,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:59:05] 2025-06-04 12:58:50,146 | INFO     | [monitor] control thread has ended
[2025-06-04 14:59:05] 2025-06-04 12:58:54,801 | INFO     | all workflow threads have been joined
[2025-06-04 14:59:05] 2025-06-04 12:58:54,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:59:05] 2025-06-04 12:58:54,802 | INFO     | traces error code: 0
[2025-06-04 14:59:05] 2025-06-04 12:58:54,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:59:05] 2025-06-04 12:58:55,102 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:59:05] 2025-06-04 12:58:55,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:59:05] 2025-06-04 12:58:55,287 [wrapper] pilotpid: 1494
[2025-06-04 14:59:05] 2025-06-04 12:58:55,337 [wrapper] Pilot exit status: 0
[2025-06-04 14:59:05] 2025-06-04 12:58:55,436 [wrapper] pandaids: 6678155108
[2025-06-04 14:59:05] 2025-06-04 12:58:55,474 [wrapper] cleanup supervisor_pilot  5797 1495
[2025-06-04 14:59:05] 2025-06-04 12:58:55,493 [wrapper] Test setup, not cleaning
[2025-06-04 14:59:05] 2025-06-04 12:58:55,528 [wrapper] apfmon messages muted
[2025-06-04 14:59:05] 2025-06-04 12:58:55,562 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:59:05] 2025-06-04 12:58:55,707 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:59:05]  *** Error codes and diagnostics ***
[2025-06-04 14:59:05]     "exeErrorCode": 0,
[2025-06-04 14:59:05]     "exeErrorDiag": "",
[2025-06-04 14:59:05]     "pilotErrorCode": 0,
[2025-06-04 14:59:05]     "pilotErrorDiag": "",
[2025-06-04 14:59:05]  *** Listing of results directory ***
[2025-06-04 14:59:05] total 395976
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-04 14:59:05] -rwx------. 1 boinc boinc     37140 Jun  4 00:56 runpilot2-wrapper.sh
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:56 queuedata.json
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:59:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:41 run_atlas
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:41 job.xml
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc      6392 Jun  4 10:41 init_data.xml
[2025-06-04 14:59:05] -rw-r--r--. 2 boinc boinc 215961505 Jun  4 10:41 EVNT.45006593._001918.pool.root.1
[2025-06-04 14:59:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:41 start_atlas.sh
[2025-06-04 14:59:05] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:41 shared
[2025-06-04 14:59:05] -rw-r--r--. 2 boinc boinc    508875 Jun  4 10:41 input.tar.gz
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:41 boinc_lockfile
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc      2525 Jun  4 11:12 pandaJob.out
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc    986774 Jun  4 11:15 agis_schedconf.cvmfs.json
[2025-06-04 14:59:05] drwx------. 4 boinc boinc      4096 Jun  4 11:15 pilot3
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc 182648147 Jun  4 14:55 HITS.45006595._047776.pool.root.1
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:55 boinc_task_state.xml
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc      1014 Jun  4 14:56 memory_monitor_summary.json
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc   1598969 Jun  4 14:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc    381315 Jun  4 14:57 log.45006595._047776.job.log.tgz.1
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc        95 Jun  4 14:57 pilot_heartbeat.json
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc      7688 Jun  4 14:58 heartbeat.json
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc      4416 Jun  4 14:58 pilotlog.txt
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc   1143891 Jun  4 14:58 log.45006595._047776.job.log.1
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc       357 Jun  4 14:58 output.list
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:58 runtime_log
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc   1546240 Jun  4 14:58 result.tar.gz
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc      8659 Jun  4 14:58 runtime_log.err
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc       657 Jun  4 14:58 nDXLDm2jpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIDaKDmQes3im.diag
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:59 boinc_mmap_file
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:59 wrapper_checkpoint.txt
[2025-06-04 14:59:05] -rw-r--r--. 1 boinc boinc     20514 Jun  4 14:59 stderr.txt
[2025-06-04 14:59:05] HITS file was successfully produced:
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc 182648147 Jun  4 14:55 shared/HITS.pool.root.1
[2025-06-04 14:59:05]  *** Contents of shared directory: ***
[2025-06-04 14:59:05] total 391296
[2025-06-04 14:59:05] -rw-r--r--. 2 boinc boinc 215961505 Jun  4 10:41 ATLAS.root_0
[2025-06-04 14:59:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:41 start_atlas.sh
[2025-06-04 14:59:05] -rw-r--r--. 2 boinc boinc    508875 Jun  4 10:41 input.tar.gz
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc 182648147 Jun  4 14:55 HITS.pool.root.1
[2025-06-04 14:59:05] -rw-------. 1 boinc boinc   1546240 Jun  4 14:58 result.tar.gz
14:59:07 (10986): run_atlas exited; CPU time 47147.724764
14:59:07 (10986): called boinc_finish(0)

</stderr_txt>
]]>

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