Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:03:56 (12628): wrapper (7.7.26015): starting
21:03:56 (12628): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 21:03:56] Arguments: --nthreads 12
[2025-06-03 21:03:56] Threads: 12
[2025-06-03 21:03:56] Checking for CVMFS
[2025-06-03 21:03:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:03:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:03:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:03:56] 2.11.2.0 2925 34997 84704 146762 3 58 13989864 20275201 1 130560 0 15016621 99.985 6030267 7264 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 21:03:56] CVMFS is ok
[2025-06-03 21:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:03:56] Further information can be found at the LHC@home message board.
[2025-06-03 21:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:03:56] Checking for apptainer binary...
[2025-06-03 21:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:03:56] Running /usr/bin/apptainer --version
[2025-06-03 21:03:56] apptainer version 1.3.2-1.el7
[2025-06-03 21:03:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:03:57] c-205-10.aglt2.org
[2025-06-03 21:03:57] apptainer works
[2025-06-03 21:03:57] Set ATHENA_PROC_NUMBER=12
[2025-06-03 21:03:57] Set ATHENA_CORE_NUMBER=12
[2025-06-03 21:03:57] Starting ATLAS job with PandaID=6678071099
[2025-06-03 21:03:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:09:41]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:09:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 22:09:41]  is_altstaged=None
[2025-06-03 22:09:41]  is_tar=False
[2025-06-03 22:09:41]  lfn=log.45006595._044961.job.log.tgz.1
[2025-06-03 22:09:41]  mtime=0
[2025-06-03 22:09:41]  protocol_id=None
[2025-06-03 22:09:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 22:09:41]  replicas=None
[2025-06-03 22:09:41]  scope=mc23_13p6TeV
[2025-06-03 22:09:41]  status=None
[2025-06-03 22:09:41]  status_code=0
[2025-06-03 22:09:41]  storage_token=
[2025-06-03 22:09:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678071099/log.45006595._044961.job.log.tgz.1
[2025-06-03 22:09:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/9c/log.45006595._044961.job.log.tgz.1
[2025-06-03 22:09:41]  workdir=None
[2025-06-03 22:09:41] ]
[2025-06-03 22:09:41] 2025-06-04 02:09:12,754 | INFO     | transferring file log.45006595._044961.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678071099/log.45006595._044961.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 22:09:41] 2025-06-04 02:09:12,754 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678071099/log.45006595._044961.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._044961.job
[2025-06-03 22:09:41] 2025-06-04 02:09:12,777 | INFO     | adding to output.list: log.45006595._044961.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/9c/log.45006595._044961.job.log.tg
[2025-06-03 22:09:41] 2025-06-04 02:09:12,778 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 22:09:41] 2025-06-04 02:09:12,778 | INFO     | summary of transferred files:
[2025-06-03 22:09:41] 2025-06-04 02:09:12,778 | INFO     |  -- lfn=log.45006595._044961.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 22:09:41] 2025-06-04 02:09:12,778 | INFO     | stage-out finished correctly
[2025-06-03 22:09:41] 2025-06-04 02:09:13,725 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 22:09:41] 2025-06-04 02:09:14,140 | INFO     | monitor loop #292: job 0:6678071099 is in state 'finished'
[2025-06-03 22:09:41] 2025-06-04 02:09:14,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:09:41] 2025-06-04 02:09:15,658 | INFO     | job 6678071099 has state=finished
[2025-06-03 22:09:41] 2025-06-04 02:09:15,658 | INFO     | preparing for final server update for job 6678071099 in state='finished'
[2025-06-03 22:09:41] 2025-06-04 02:09:15,659 | INFO     | this job has now completed (state=finished)
[2025-06-03 22:09:41] 2025-06-04 02:09:15,659 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 22:09:41] 2025-06-04 02:09:15,659 | INFO     | log transfer has been attempted: DONE
[2025-06-03 22:09:41] 2025-06-04 02:09:15,659 | INFO     | job 6678071099 has finished - writing final server update
[2025-06-03 22:09:41] 2025-06-04 02:09:15,659 | INFO     | total number of processed events: 400 (read)
[2025-06-03 22:09:41] 2025-06-04 02:09:15,661 | INFO     | executing command: lscpu
[2025-06-03 22:09:41] 2025-06-04 02:09:15,691 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 22:09:41] 2025-06-04 02:09:16,644 | INFO     | monitor loop #293: job 0:6678071099 is in state 'finished'
[2025-06-03 22:09:41] 2025-06-04 02:09:16,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:09:41] 2025-06-04 02:09:19,147 | INFO     | monitor loop #294: job 0:6678071099 is in state 'finished'
[2025-06-03 22:09:41] 2025-06-04 02:09:19,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:09:41] 2025-06-04 02:09:20,459 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 22:09:41] 2025-06-04 02:09:20,460 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678071099/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:09:41] 2025-06-04 02:09:20,461 | INFO     | extracted standard info from prmon json
[2025-06-03 22:09:41] 2025-06-04 02:09:20,461 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:09:41] 2025-06-04 02:09:20,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:09:41] 2025-06-04 02:09:20,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:09:41] 2025-06-04 02:09:20,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:09:41] 2025-06-04 02:09:20,464 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:09:41] 2025-06-04 02:09:20,464 | INFO     | sum of square deviations: 57407588.0
[2025-06-03 22:09:41] 2025-06-04 02:09:20,465 | INFO     | sum of deviations: -84029451.99999994
[2025-06-03 22:09:41] 2025-06-04 02:09:20,465 | INFO     | mean x: 1749001095.0
[2025-06-03 22:09:41] 2025-06-04 02:09:20,465 | INFO     | mean y: 2662998.736842105
[2025-06-03 22:09:41] 2025-06-04 02:09:20,466 | INFO     | -- intersect: 2562735781.4541693
[2025-06-03 22:09:41] 2025-06-04 02:09:20,466 | INFO     | intersect: 2562735781.4541693
[2025-06-03 22:09:41] 2025-06-04 02:09:20,466 | INFO     | chi2: 0.048975190319546204
[2025-06-03 22:09:41] 2025-06-04 02:09:20,466 | INFO     | -- intersect: 2562735781.4541693
[2025-06-03 22:09:41] 2025-06-04 02:09:20,466 | INFO     | current memory leak: -1.46 B/s (using 57 data points, chi2=0.05)
[2025-06-03 22:09:41] 2025-06-04 02:09:20,467 | INFO     | ..............................
[2025-06-03 22:09:41] 2025-06-04 02:09:20,467 | INFO     | . Timing measurements:
[2025-06-03 22:09:41] 2025-06-04 02:09:20,467 | INFO     | . get job = 0 s
[2025-06-03 22:09:41] 2025-06-04 02:09:20,467 | INFO     | . initial setup = 2 s
[2025-06-03 22:09:41] 2025-06-04 02:09:20,467 | INFO     | . payload setup = 9 s
[2025-06-03 22:09:41] 2025-06-04 02:09:20,467 | INFO     | . stage-in = 0 s
[2025-06-03 22:09:41] 2025-06-04 02:09:20,467 | INFO     | . payload execution = 3870 s
[2025-06-03 22:09:41] 2025-06-04 02:09:20,468 | INFO     | . stage-out = 0 s
[2025-06-03 22:09:41] 2025-06-04 02:09:20,468 | INFO     | . log creation = 0 s
[2025-06-03 22:09:41] 2025-06-04 02:09:20,468 | INFO     | ..............................
[2025-06-03 22:09:41] 2025-06-04 02:09:21,004 | INFO     | 
[2025-06-03 22:09:41] 2025-06-04 02:09:21,005 | INFO     | job summary report
[2025-06-03 22:09:41] 2025-06-04 02:09:21,008 | INFO     | --------------------------------------------------
[2025-06-03 22:09:41] 2025-06-04 02:09:21,009 | INFO     | PanDA job id: 6678071099
[2025-06-03 22:09:41] 2025-06-04 02:09:21,009 | INFO     | task id: 45006595
[2025-06-03 22:09:41] 2025-06-04 02:09:21,009 | INFO     | errors: (none)
[2025-06-03 22:09:41] 2025-06-04 02:09:21,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:09:41] 2025-06-04 02:09:21,009 | INFO     | pilot state: finished 
[2025-06-03 22:09:41] 2025-06-04 02:09:21,009 | INFO     | transexitcode: 0
[2025-06-03 22:09:41] 2025-06-04 02:09:21,010 | INFO     | exeerrorcode: 0
[2025-06-03 22:09:41] 2025-06-04 02:09:21,010 | INFO     | exeerrordiag: 
[2025-06-03 22:09:41] 2025-06-04 02:09:21,010 | INFO     | exitcode: 0
[2025-06-03 22:09:41] 2025-06-04 02:09:21,010 | INFO     | exitmsg: OK
[2025-06-03 22:09:41] 2025-06-04 02:09:21,010 | INFO     | cpuconsumptiontime: 40886 s
[2025-06-03 22:09:41] 2025-06-04 02:09:21,010 | INFO     | nevents: 400
[2025-06-03 22:09:41] 2025-06-04 02:09:21,011 | INFO     | neventsw: 0
[2025-06-03 22:09:41] 2025-06-04 02:09:21,011 | INFO     | pid: 23651
[2025-06-03 22:09:41] 2025-06-04 02:09:21,011 | INFO     | pgrp: 23651
[2025-06-03 22:09:41] 2025-06-04 02:09:21,011 | INFO     | corecount: 12
[2025-06-03 22:09:41] 2025-06-04 02:09:21,011 | INFO     | event service: False
[2025-06-03 22:09:41] 2025-06-04 02:09:21,011 | INFO     | sizes: {0: 2405011, 1: 2405210, 5: 2405416, 11: 2405472, 3884: 2431123, 3886: 2440064, 3887: 2440248, 3894: 2440418}
[2025-06-03 22:09:41] 2025-06-04 02:09:21,012 | INFO     | --------------------------------------------------
[2025-06-03 22:09:41] 2025-06-04 02:09:21,012 | INFO     | 
[2025-06-03 22:09:41] 2025-06-04 02:09:21,012 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 22:09:41] 2025-06-04 02:09:21,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:09:41] 2025-06-04 02:09:21,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:09:41] 2025-06-04 02:09:21,039 | INFO     | job 6678071099 has completed (purged errors)
[2025-06-03 22:09:41] 2025-06-04 02:09:21,040 | INFO     | overall cleanup function is called
[2025-06-03 22:09:41] 2025-06-04 02:09:22,047 | INFO     | --- collectZombieJob: --- 10, [23651]
[2025-06-03 22:09:41] 2025-06-04 02:09:22,048 | INFO     | zombie collector waiting for pid 23651
[2025-06-03 22:09:41] 2025-06-04 02:09:22,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:09:41] 2025-06-04 02:09:22,048 | INFO     | collected zombie processes
[2025-06-03 22:09:41] 2025-06-04 02:09:22,048 | INFO     | will attempt to kill all subprocesses of pid=23651
[2025-06-03 22:09:41] 2025-06-04 02:09:22,140 | INFO     | process IDs to be killed: [23651] (in reverse order)
[2025-06-03 22:09:41] 2025-06-04 02:09:22,193 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:09:41] 2025-06-04 02:09:22,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:09:41] 2025-06-04 02:09:22,197 | INFO     | did not find any defunct processes belonging to 23651
[2025-06-03 22:09:41] 2025-06-04 02:09:22,200 | INFO     | did not find any defunct processes belonging to 23651
[2025-06-03 22:09:41] 2025-06-04 02:09:22,200 | INFO     | ready for new job
[2025-06-03 22:09:41] 2025-06-04 02:09:22,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:09:41] 2025-06-04 02:09:22,201 | INFO     | **************************************
[2025-06-03 22:09:41] 2025-06-04 02:09:22,202 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:09:41] 2025-06-04 02:09:22,202 | INFO     | **************************************
[2025-06-03 22:09:41] 2025-06-04 02:09:22,202 | INFO     | 
[2025-06-03 22:09:41] 2025-06-04 02:09:22,202 | INFO     | architecture information:
[2025-06-03 22:09:41] 2025-06-04 02:09:22,203 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:09:41] 2025-06-04 02:09:22,217 | INFO     | cat /etc/os-release:
[2025-06-03 22:09:41] NAME="CentOS Linux"
[2025-06-03 22:09:41] VERSION="7 (Core)"
[2025-06-03 22:09:41] ID="centos"
[2025-06-03 22:09:41] ID_LIKE="rhel fedora"
[2025-06-03 22:09:41] VERSION_ID="7"
[2025-06-03 22:09:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:09:41] ANSI_COLOR="0;31"
[2025-06-03 22:09:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:09:41] HOME_URL="https://www.centos.org/"
[2025-06-03 22:09:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:09:41] 
[2025-06-03 22:09:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:09:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:09:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:09:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:09:41] 
[2025-06-03 22:09:41] 2025-06-04 02:09:22,217 | INFO     | **************************************
[2025-06-03 22:09:41] 2025-06-04 02:09:22,720 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 22:09:41] 2025-06-04 02:09:22,775 | INFO     | sufficient remaining disk space (29423042560 B)
[2025-06-03 22:09:41] 2025-06-04 02:09:22,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:09:41] 2025-06-04 02:09:22,775 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:09:41] 2025-06-04 02:09:22,775 | INFO     | update_server=False
[2025-06-03 22:09:41] 2025-06-04 02:09:22,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:09:41] 2025-06-04 02:09:22,776 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 22:09:41] 2025-06-04 02:09:22,776 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:09:41] 2025-06-04 02:09:22,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:09:41] 2025-06-04 02:09:22,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:09:41] 2025-06-04 02:09:22,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:09:41] 2025-06-04 02:09:22,777 | INFO     | aborting loop
[2025-06-03 22:09:41] 2025-06-04 02:09:23,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:09:41] 2025-06-04 02:09:23,597 | INFO     | all data control threads have been joined
[2025-06-03 22:09:41] 2025-06-04 02:09:23,757 | INFO     | all job control threads have been joined
[2025-06-03 22:09:41] 2025-06-04 02:09:23,779 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:23,781 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:23,783 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:23,909 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:23,929 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:24,259 | INFO     | all payload control threads have been joined
[2025-06-03 22:09:41] 2025-06-04 02:09:24,300 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:24,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:09:41] 2025-06-04 02:09:24,599 | INFO     | [data] control thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:24,646 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:24,761 | INFO     | [job] control thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:25,051 | INFO     | [job] validate thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:25,264 | INFO     | [payload] control thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:25,265 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:25,384 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:25,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:09:41] 2025-06-04 02:09:26,569 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:28,325 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:32,787 | INFO     | job.realtimelogging is not enabled
[2025-06-03 22:09:41] 2025-06-04 02:09:33,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:09:41] 2025-06-04 02:09:35,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015077762880)>', '<ExcThread(monitor, started 140014499383040)>']
[2025-06-03 22:09:41] 2025-06-04 02:09:36,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:09:41] 2025-06-04 02:09:36,845 | INFO     | [monitor] control thread has ended
[2025-06-03 22:09:41] 2025-06-04 02:09:40,918 | INFO     | all workflow threads have been joined
[2025-06-03 22:09:41] 2025-06-04 02:09:40,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:09:41] 2025-06-04 02:09:40,919 | INFO     | traces error code: 0
[2025-06-03 22:09:41] 2025-06-04 02:09:40,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:09:41] 2025-06-04 02:09:41,012 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:09:41] 2025-06-04 02:09:41,016 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:09:41] 2025-06-04 02:09:41,020 [wrapper] pilotpid: 16564
[2025-06-03 22:09:41] 2025-06-04 02:09:41,023 [wrapper] Pilot exit status: 0
[2025-06-03 22:09:41] 2025-06-04 02:09:41,039 [wrapper] pandaids: 6678071099
[2025-06-03 22:09:41] 2025-06-04 02:09:41,079 [wrapper] cleanup supervisor_pilot 29756 16565
[2025-06-03 22:09:41] 2025-06-04 02:09:41,083 [wrapper] Test setup, not cleaning
[2025-06-03 22:09:41] 2025-06-04 02:09:41,087 [wrapper] apfmon messages muted
[2025-06-03 22:09:41] 2025-06-04 02:09:41,091 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:09:41] 2025-06-04 02:09:41,095 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:09:41]  *** Error codes and diagnostics ***
[2025-06-03 22:09:41]     "exeErrorCode": 0,
[2025-06-03 22:09:41]     "exeErrorDiag": "",
[2025-06-03 22:09:41]     "pilotErrorCode": 0,
[2025-06-03 22:09:41]     "pilotErrorDiag": "",
[2025-06-03 22:09:41]  *** Listing of results directory ***
[2025-06-03 22:09:41] total 388948
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 16:35 queuedata.json
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 16:36 pilot3.tar.gz
[2025-06-03 22:09:41] -rwx------ 1 boincer umatlas     37140 Jun  3 16:37 runpilot2-wrapper.sh
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas       100 Jun  3 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:09:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 21:03 run_atlas
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas       105 Jun  3 21:03 job.xml
[2025-06-03 22:09:41] -rw-r--r-- 2 boincer umatlas 214991441 Jun  3 21:03 EVNT.45006593._001804.pool.root.1
[2025-06-03 22:09:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 21:03 start_atlas.sh
[2025-06-03 22:09:41] drwxrwx--x 2 boincer umatlas      4096 Jun  3 21:03 shared
[2025-06-03 22:09:41] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 21:03 input.tar.gz
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas         0 Jun  3 21:03 boinc_lockfile
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 21:03 pandaJob.out
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas    986069 Jun  3 21:04 agis_schedconf.cvmfs.json
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas   1603667 Jun  3 21:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:09:41] drwx------ 4 boincer umatlas      4096 Jun  3 21:04 pilot3
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas      5868 Jun  3 22:00 init_data.xml
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas 178001277 Jun  3 22:08 HITS.45006595._044961.pool.root.1
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas        95 Jun  3 22:08 pilot_heartbeat.json
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas       529 Jun  3 22:09 boinc_task_state.xml
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas      1048 Jun  3 22:09 memory_monitor_summary.json
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas    344013 Jun  3 22:09 log.45006595._044961.job.log.tgz.1
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas      7742 Jun  3 22:09 heartbeat.json
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 22:09 boinc_mmap_file
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas        27 Jun  3 22:09 wrapper_checkpoint.txt
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas      4548 Jun  3 22:09 pilotlog.txt
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas    382566 Jun  3 22:09 log.45006595._044961.job.log.1
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas       357 Jun  3 22:09 output.list
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas       620 Jun  3 22:09 runtime_log
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas    747520 Jun  3 22:09 result.tar.gz
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 22:09 runtime_log.err
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas       659 Jun  3 22:09 G1pMDmRZng7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1tZKDmsYhLTn.diag
[2025-06-03 22:09:41] -rw-r--r-- 1 boincer umatlas     21346 Jun  3 22:09 stderr.txt
[2025-06-03 22:09:41] HITS file was successfully produced:
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas 178001277 Jun  3 22:08 shared/HITS.pool.root.1
[2025-06-03 22:09:41]  *** Contents of shared directory: ***
[2025-06-03 22:09:41] total 385040
[2025-06-03 22:09:41] -rw-r--r-- 2 boincer umatlas 214991441 Jun  3 21:03 ATLAS.root_0
[2025-06-03 22:09:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 21:03 start_atlas.sh
[2025-06-03 22:09:41] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 21:03 input.tar.gz
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas 178001277 Jun  3 22:08 HITS.pool.root.1
[2025-06-03 22:09:41] -rw------- 1 boincer umatlas    747520 Jun  3 22:09 result.tar.gz
22:09:42 (12628): run_atlas exited; CPU time 40812.042679
22:09:42 (12628): called boinc_finish(0)

</stderr_txt>
]]>

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