Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:05:30 (2641306): wrapper (7.7.26015): starting
21:05:30 (2641306): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 21:05:30] Arguments: --nthreads 10
[2025-06-03 21:05:30] Threads: 10
[2025-06-03 21:05:30] Checking for CVMFS
[2025-06-03 21:05:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:05:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:05:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:05:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:05:31] 2.12.6.0 3466542 94078 314248 146762 2 120 27115474 32935936 16786 130560 2 357276715 99.614 372551604 25596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 21:05:31] CVMFS is ok
[2025-06-03 21:05:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:05:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:05:31] Further information can be found at the LHC@home message board.
[2025-06-03 21:05:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:05:31] Checking for apptainer binary...
[2025-06-03 21:05:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:05:31] Running /usr/bin/apptainer --version
[2025-06-03 21:05:31] apptainer version 1.4.1-1.el9
[2025-06-03 21:05:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:05:32] c-4-11.aglt2.org
[2025-06-03 21:05:32] apptainer works
[2025-06-03 21:05:32] Set ATHENA_PROC_NUMBER=10
[2025-06-03 21:05:32] Set ATHENA_CORE_NUMBER=10
[2025-06-03 21:05:32] Starting ATLAS job with PandaID=6678071258
[2025-06-03 21:05:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:38:17]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:38:17] 2025-06-04 03:37:56,900 | INFO     | chi2: 3.236722241336347
[2025-06-03 23:38:17] 2025-06-04 03:37:56,900 | INFO     | current chi2=3.236722241336347 (change=0.029710317893413215 %)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,900 | INFO     | right removable region: 143
[2025-06-03 23:38:17] 2025-06-04 03:37:56,900 | INFO     | sum of square deviations: 925993669.4375
[2025-06-03 23:38:17] 2025-06-04 03:37:56,901 | INFO     | sum of deviations: 7952499121.020828
[2025-06-03 23:38:17] 2025-06-04 03:37:56,901 | INFO     | mean x: 1749003845.8958333
[2025-06-03 23:38:17] 2025-06-04 03:37:56,902 | INFO     | mean y: 2458030.8680555555
[2025-06-03 23:38:17] 2025-06-04 03:37:56,902 | INFO     | -- intersect: -15018110690.295807
[2025-06-03 23:38:17] 2025-06-04 03:37:56,902 | INFO     | intersect: -15018110690.295807
[2025-06-03 23:38:17] 2025-06-04 03:37:56,902 | INFO     | chi2: 0.8250537178008186
[2025-06-03 23:38:17] 2025-06-04 03:37:56,903 | INFO     | current chi2=0.8250537178008186 (change=74.51716489030798 %)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,903 | INFO     | sum of square deviations: 832839653.625901
[2025-06-03 23:38:17] 2025-06-04 03:37:56,904 | INFO     | sum of deviations: -10318135445.11511
[2025-06-03 23:38:17] 2025-06-04 03:37:56,904 | INFO     | mean x: 1749003998.4100718
[2025-06-03 23:38:17] 2025-06-04 03:37:56,904 | INFO     | mean y: 2487748.510791367
[2025-06-03 23:38:17] 2025-06-04 03:37:56,904 | INFO     | -- intersect: 21671076739.290535
[2025-06-03 23:38:17] 2025-06-04 03:37:56,904 | INFO     | intersect: 21671076739.290535
[2025-06-03 23:38:17] 2025-06-04 03:37:56,904 | INFO     | chi2: 0.10699771640600836
[2025-06-03 23:38:17] 2025-06-04 03:37:56,905 | INFO     | current chi2=0.10699771640600836 (change=87.03142424577992 %)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,905 | INFO     | sum of square deviations: 746159232.0970151
[2025-06-03 23:38:17] 2025-06-04 03:37:56,906 | INFO     | sum of deviations: -13560628272.3582
[2025-06-03 23:38:17] 2025-06-04 03:37:56,906 | INFO     | mean x: 1749004150.9179103
[2025-06-03 23:38:17] 2025-06-04 03:37:56,906 | INFO     | mean y: 2493324.149253731
[2025-06-03 23:38:17] 2025-06-04 03:37:56,906 | INFO     | -- intersect: 31788731592.290813
[2025-06-03 23:38:17] 2025-06-04 03:37:56,906 | INFO     | intersect: 31788731592.290813
[2025-06-03 23:38:17] 2025-06-04 03:37:56,906 | INFO     | chi2: 0.042099167096243624
[2025-06-03 23:38:17] 2025-06-04 03:37:56,906 | INFO     | current chi2=0.042099167096243624 (change=60.654144302953014 %)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,907 | INFO     | sum of square deviations: 665703433.6899202
[2025-06-03 23:38:17] 2025-06-04 03:37:56,907 | INFO     | sum of deviations: -12707895875.069775
[2025-06-03 23:38:17] 2025-06-04 03:37:56,908 | INFO     | mean x: 1749004303.4341085
[2025-06-03 23:38:17] 2025-06-04 03:37:56,908 | INFO     | mean y: 2491703.697674419
[2025-06-03 23:38:17] 2025-06-04 03:37:56,908 | INFO     | -- intersect: 33389978455.707394
[2025-06-03 23:38:17] 2025-06-04 03:37:56,908 | INFO     | intersect: 33389978455.707394
[2025-06-03 23:38:17] 2025-06-04 03:37:56,908 | INFO     | chi2: 0.0410625959954577
[2025-06-03 23:38:17] 2025-06-04 03:37:56,908 | INFO     | current chi2=0.0410625959954577 (change=2.4622128471477795 %)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,908 | INFO     | left removable region: 40
[2025-06-03 23:38:17] 2025-06-04 03:37:56,909 | INFO     | sum of square deviations: 338865427.7281546
[2025-06-03 23:38:17] 2025-06-04 03:37:56,910 | INFO     | sum of deviations: -5354392681.038832
[2025-06-03 23:38:17] 2025-06-04 03:37:56,910 | INFO     | mean x: 1749004730.485437
[2025-06-03 23:38:17] 2025-06-04 03:37:56,910 | INFO     | sufficient remaining disk space (76590088192 B)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,910 | INFO     | mean y: 2477140.640776699
[2025-06-03 23:38:17] 2025-06-04 03:37:56,911 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,911 | INFO     | -- intersect: 27638397956.753704
[2025-06-03 23:38:17] 2025-06-04 03:37:56,911 | INFO     | intersect: 27638397956.753704
[2025-06-03 23:38:17] 2025-06-04 03:37:56,911 | INFO     | chi2: 0.03425244540650466
[2025-06-03 23:38:17] 2025-06-04 03:37:56,912 | INFO     | -- intersect: 27638397956.753704
[2025-06-03 23:38:17] 2025-06-04 03:37:56,912 | INFO     | current memory leak: -15.80 B/s (using 103 data points, chi2=0.03)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,913 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678071258: 3994598 B (within 2537553920 B limit)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,913 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678071258/HITS.45006595._045120.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,913 | INFO     | total size of present files: 0 B (workdir size: 3994598 B)
[2025-06-03 23:38:17] 2025-06-04 03:37:56,914 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678071258/HITS.45006595._045120.pool.root.1 since it does not exist
[2025-06-03 23:38:17] 2025-06-04 03:37:56,916 | INFO     | ..............................
[2025-06-03 23:38:17] 2025-06-04 03:37:56,917 | INFO     | . Timing measurements:
[2025-06-03 23:38:17] 2025-06-04 03:37:56,917 | INFO     | . get job = 0 s
[2025-06-03 23:38:17] 2025-06-04 03:37:56,917 | INFO     | . initial setup = 2 s
[2025-06-03 23:38:17] 2025-06-04 03:37:56,917 | INFO     | . payload setup = 9 s
[2025-06-03 23:38:17] 2025-06-04 03:37:56,917 | INFO     | . stage-in = 0 s
[2025-06-03 23:38:17] 2025-06-04 03:37:56,917 | INFO     | . payload execution = 9095 s
[2025-06-03 23:38:17] 2025-06-04 03:37:56,917 | INFO     | . stage-out = 0 s
[2025-06-03 23:38:17] 2025-06-04 03:37:56,917 | INFO     | . log creation = 0 s
[2025-06-03 23:38:17] 2025-06-04 03:37:56,917 | INFO     | ..............................
[2025-06-03 23:38:17] 2025-06-04 03:37:57,031 | INFO     | 
[2025-06-03 23:38:17] 2025-06-04 03:37:57,032 | INFO     | job summary report
[2025-06-03 23:38:17] 2025-06-04 03:37:57,032 | INFO     | --------------------------------------------------
[2025-06-03 23:38:17] 2025-06-04 03:37:57,032 | INFO     | PanDA job id: 6678071258
[2025-06-03 23:38:17] 2025-06-04 03:37:57,032 | INFO     | task id: 45006595
[2025-06-03 23:38:17] 2025-06-04 03:37:57,032 | INFO     | errors: (none)
[2025-06-03 23:38:17] 2025-06-04 03:37:57,032 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:38:17] 2025-06-04 03:37:57,032 | INFO     | pilot state: finished 
[2025-06-03 23:38:17] 2025-06-04 03:37:57,033 | INFO     | transexitcode: 0
[2025-06-03 23:38:17] 2025-06-04 03:37:57,033 | INFO     | exeerrorcode: 0
[2025-06-03 23:38:17] 2025-06-04 03:37:57,033 | INFO     | exeerrordiag: 
[2025-06-03 23:38:17] 2025-06-04 03:37:57,033 | INFO     | exitcode: 0
[2025-06-03 23:38:17] 2025-06-04 03:37:57,033 | INFO     | exitmsg: OK
[2025-06-03 23:38:17] 2025-06-04 03:37:57,033 | INFO     | cpuconsumptiontime: 44009 s
[2025-06-03 23:38:17] 2025-06-04 03:37:57,033 | INFO     | nevents: 400
[2025-06-03 23:38:17] 2025-06-04 03:37:57,033 | INFO     | neventsw: 0
[2025-06-03 23:38:17] 2025-06-04 03:37:57,033 | INFO     | pid: 2659104
[2025-06-03 23:38:17] 2025-06-04 03:37:57,034 | INFO     | pgrp: 2659104
[2025-06-03 23:38:17] 2025-06-04 03:37:57,034 | INFO     | corecount: 10
[2025-06-03 23:38:17] 2025-06-04 03:37:57,034 | INFO     | event service: False
[2025-06-03 23:38:17] 2025-06-04 03:37:57,034 | INFO     | sizes: {0: 2405184, 1: 2405184, 5: 2405418, 11: 2405474, 9108: 2433581, 9109: 2442706, 9115: 2442848}
[2025-06-03 23:38:17] 2025-06-04 03:37:57,034 | INFO     | --------------------------------------------------
[2025-06-03 23:38:17] 2025-06-04 03:37:57,034 | INFO     | 
[2025-06-03 23:38:17] 2025-06-04 03:37:57,034 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 23:38:17] 2025-06-04 03:37:57,055 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,056 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,059 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,059 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:38:17] 2025-06-04 03:37:57,059 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,059 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:38:17] 2025-06-04 03:37:57,060 | INFO     | job 6678071258 has completed (purged errors)
[2025-06-03 23:38:17] 2025-06-04 03:37:57,060 | INFO     | overall cleanup function is called
[2025-06-03 23:38:17] 2025-06-04 03:37:57,442 | INFO     | number of running child processes to parent process 2659104: 1
[2025-06-03 23:38:17] 2025-06-04 03:37:57,442 | INFO     | maximum number of monitored processes: 6
[2025-06-03 23:38:17] 2025-06-04 03:37:57,442 | INFO     | aborting job monitoring since job object (job id=6678071258) has expired
[2025-06-03 23:38:17] 2025-06-04 03:37:58,070 | INFO     | --- collectZombieJob: --- 10, [2659104]
[2025-06-03 23:38:17] 2025-06-04 03:37:58,070 | INFO     | zombie collector waiting for pid 2659104
[2025-06-03 23:38:17] 2025-06-04 03:37:58,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:38:17] 2025-06-04 03:37:58,071 | INFO     | collected zombie processes
[2025-06-03 23:38:17] 2025-06-04 03:37:58,071 | INFO     | will attempt to kill all subprocesses of pid=2659104
[2025-06-03 23:38:17] 2025-06-04 03:37:58,617 | INFO     | process IDs to be killed: [2659104] (in reverse order)
[2025-06-03 23:38:17] 2025-06-04 03:37:58,732 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:38:17] 2025-06-04 03:37:58,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:38:17] 2025-06-04 03:37:58,775 | INFO     | did not find any defunct processes belonging to 2659104
[2025-06-03 23:38:17] 2025-06-04 03:37:58,819 | INFO     | did not find any defunct processes belonging to 2659104
[2025-06-03 23:38:17] 2025-06-04 03:37:58,820 | INFO     | ready for new job
[2025-06-03 23:38:17] 2025-06-04 03:37:58,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:38:17] 2025-06-04 03:37:58,822 | INFO     | **************************************
[2025-06-03 23:38:17] 2025-06-04 03:37:58,822 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:38:17] 2025-06-04 03:37:58,822 | INFO     | **************************************
[2025-06-03 23:38:17] 2025-06-04 03:37:58,822 | INFO     | 
[2025-06-03 23:38:17] 2025-06-04 03:37:58,837 | INFO     | architecture information:
[2025-06-03 23:38:17] 2025-06-04 03:37:58,838 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:38:17] 2025-06-04 03:37:58,853 | INFO     | cat /etc/os-release:
[2025-06-03 23:38:17] NAME="CentOS Linux"
[2025-06-03 23:38:17] VERSION="7 (Core)"
[2025-06-03 23:38:17] ID="centos"
[2025-06-03 23:38:17] ID_LIKE="rhel fedora"
[2025-06-03 23:38:17] VERSION_ID="7"
[2025-06-03 23:38:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:38:17] ANSI_COLOR="0;31"
[2025-06-03 23:38:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:38:17] HOME_URL="https://www.centos.org/"
[2025-06-03 23:38:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:38:17] 
[2025-06-03 23:38:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:38:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:38:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:38:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:38:17] 
[2025-06-03 23:38:17] 2025-06-04 03:37:58,854 | INFO     | **************************************
[2025-06-03 23:38:17] 2025-06-04 03:37:59,046 | INFO     | PID=2645628 has CPU usage=15.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 23:38:17] 2025-06-04 03:37:59,046 | INFO     | .. there are 30 such processes running
[2025-06-03 23:38:17] 2025-06-04 03:37:59,357 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 23:38:17] 2025-06-04 03:37:59,375 | INFO     | sufficient remaining disk space (76594282496 B)
[2025-06-03 23:38:17] 2025-06-04 03:37:59,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:38:17] 2025-06-04 03:37:59,376 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:38:17] 2025-06-04 03:37:59,376 | INFO     | update_server=False
[2025-06-03 23:38:17] 2025-06-04 03:37:59,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:38:17] 2025-06-04 03:37:59,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:38:17] 2025-06-04 03:37:59,376 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 23:38:17] 2025-06-04 03:37:59,377 | INFO     | aborting loop
[2025-06-03 23:38:17] 2025-06-04 03:37:59,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:38:17] 2025-06-04 03:37:59,377 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:38:17] 2025-06-04 03:37:59,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:38:17] 2025-06-04 03:37:59,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:38:17] 2025-06-04 03:38:00,104 | INFO     | all data control threads have been joined
[2025-06-03 23:38:17] 2025-06-04 03:38:00,172 | INFO     | all payload control threads have been joined
[2025-06-03 23:38:17] 2025-06-04 03:38:00,382 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:00,382 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:00,458 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:00,465 | INFO     | [job] validate thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:00,496 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:00,717 | INFO     | all job control threads have been joined
[2025-06-03 23:38:17] 2025-06-04 03:38:01,110 | INFO     | [data] control thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:01,177 | INFO     | [payload] control thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:01,300 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:01,383 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:01,484 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:01,722 | INFO     | [job] control thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:01,726 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:01,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:38:17] 2025-06-04 03:38:01,949 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:02,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:38:17] 2025-06-04 03:38:03,044 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:05,820 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:10,146 | INFO     | job.realtimelogging is not enabled
[2025-06-03 23:38:17] 2025-06-04 03:38:11,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:38:17] 2025-06-04 03:38:11,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140432123909952)>', '<ExcThread(monitor, started 140431631296256)>']
[2025-06-03 23:38:17] 2025-06-04 03:38:12,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:38:17] 2025-06-04 03:38:12,442 | INFO     | [monitor] control thread has ended
[2025-06-03 23:38:17] 2025-06-04 03:38:16,753 | INFO     | all workflow threads have been joined
[2025-06-03 23:38:17] 2025-06-04 03:38:16,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:38:17] 2025-06-04 03:38:16,753 | INFO     | traces error code: 0
[2025-06-03 23:38:17] 2025-06-04 03:38:16,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:38:17] 2025-06-04 03:38:16,932 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:38:17] 2025-06-04 03:38:16,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:38:17] 2025-06-04 03:38:16,938 [wrapper] pilotpid: 2645628
[2025-06-03 23:38:17] 2025-06-04 03:38:16,941 [wrapper] Pilot exit status: 0
[2025-06-03 23:38:17] 2025-06-04 03:38:16,953 [wrapper] pandaids: 6678071258
[2025-06-03 23:38:17] 2025-06-04 03:38:17,035 [wrapper] cleanup supervisor_pilot 3325748 2645629
[2025-06-03 23:38:17] 2025-06-04 03:38:17,038 [wrapper] Test setup, not cleaning
[2025-06-03 23:38:17] 2025-06-04 03:38:17,041 [wrapper] apfmon messages muted
[2025-06-03 23:38:17] 2025-06-04 03:38:17,044 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:38:17] 2025-06-04 03:38:17,047 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:38:17]  *** Error codes and diagnostics ***
[2025-06-03 23:38:17]     "exeErrorCode": 0,
[2025-06-03 23:38:17]     "exeErrorDiag": "",
[2025-06-03 23:38:17]     "pilotErrorCode": 0,
[2025-06-03 23:38:17]     "pilotErrorDiag": "",
[2025-06-03 23:38:17]  *** Listing of results directory ***
[2025-06-03 23:38:17] total 391848
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 16:36 pilot3.tar.gz
[2025-06-03 23:38:17] -rwx------. 1 boincer umatlas     37140 Jun  3 16:43 runpilot2-wrapper.sh
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 16:43 queuedata.json
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas       100 Jun  3 21:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:38:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 21:05 run_atlas
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas       105 Jun  3 21:05 job.xml
[2025-06-03 23:38:17] -rw-r--r--. 2 boincer umatlas 215798872 Jun  3 21:05 EVNT.45006593._001810.pool.root.1
[2025-06-03 23:38:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:05 start_atlas.sh
[2025-06-03 23:38:17] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 21:05 shared
[2025-06-03 23:38:17] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 21:05 input.tar.gz
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas         0 Jun  3 21:05 boinc_lockfile
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 21:05 pandaJob.out
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas    986069 Jun  3 21:05 agis_schedconf.cvmfs.json
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:05 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:38:17] drwx------. 4 boincer umatlas      4096 Jun  3 21:05 pilot3
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 23:37 init_data.xml
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas 179262032 Jun  3 23:37 HITS.45006595._045120.pool.root.1
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas       530 Jun  3 23:37 boinc_task_state.xml
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas        95 Jun  3 23:37 pilot_heartbeat.json
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas      1045 Jun  3 23:37 memory_monitor_summary.json
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas    372069 Jun  3 23:37 log.45006595._045120.job.log.tgz.1
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas      7727 Jun  3 23:37 heartbeat.json
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 23:38 boinc_mmap_file
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas        27 Jun  3 23:38 wrapper_checkpoint.txt
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas      4944 Jun  3 23:38 pilotlog.txt
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas    805032 Jun  3 23:38 log.45006595._045120.job.log.1
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas       357 Jun  3 23:38 output.list
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas       620 Jun  3 23:38 runtime_log
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas   1198080 Jun  3 23:38 result.tar.gz
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas       653 Jun  3 23:38 sbHLDmzeng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm55lKDmpKTE7m.diag
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas      8651 Jun  3 23:38 runtime_log.err
[2025-06-03 23:38:17] -rw-r--r--. 1 boincer umatlas     21470 Jun  3 23:38 stderr.txt
[2025-06-03 23:38:17] HITS file was successfully produced:
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas 179262032 Jun  3 23:37 shared/HITS.pool.root.1
[2025-06-03 23:38:17]  *** Contents of shared directory: ***
[2025-06-03 23:38:17] total 387500
[2025-06-03 23:38:17] -rw-r--r--. 2 boincer umatlas 215798872 Jun  3 21:05 ATLAS.root_0
[2025-06-03 23:38:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:05 start_atlas.sh
[2025-06-03 23:38:17] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 21:05 input.tar.gz
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas 179262032 Jun  3 23:37 HITS.pool.root.1
[2025-06-03 23:38:17] -rw-------. 1 boincer umatlas   1198080 Jun  3 23:38 result.tar.gz
23:38:19 (2641306): run_atlas exited; CPU time 44295.077093
23:38:19 (2641306): called boinc_finish(0)

</stderr_txt>
]]>

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