Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:40:13 (1840585): wrapper (7.7.26015): starting
11:40:13 (1840585): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 11:40:13] Arguments: --nthreads 3
[2025-06-04 11:40:13] Threads: 3
[2025-06-04 11:40:13] Checking for CVMFS
[2025-06-04 11:40:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:40:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:40:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:40:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:40:13] 2.9.2.0 1053229 2314 82732 146775 0 56 31269502 36864000 0 130560 0 2133771 99.993 597121 40951 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 11:40:13] CVMFS is ok
[2025-06-04 11:40:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:40:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:40:13] Further information can be found at the LHC@home message board.
[2025-06-04 11:40:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:40:13] Checking for apptainer binary...
[2025-06-04 11:40:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:40:13] Running /usr/bin/apptainer --version
[2025-06-04 11:40:13] apptainer version 1.3.6-6.1
[2025-06-04 11:40:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:40:13] thA357
[2025-06-04 11:40:13] apptainer works
[2025-06-04 11:40:13] Set ATHENA_PROC_NUMBER=3
[2025-06-04 11:40:13] Set ATHENA_CORE_NUMBER=3
[2025-06-04 11:40:13] Starting ATLAS job with PandaID=6677976068
[2025-06-04 11:40:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:50:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:50:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:50:37]  is_altstaged=None
[2025-06-04 12:50:37]  is_tar=False
[2025-06-04 12:50:37]  lfn=log.45006595._043043.job.log.tgz.1
[2025-06-04 12:50:37]  mtime=0
[2025-06-04 12:50:37]  protocol_id=None
[2025-06-04 12:50:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:50:37]  replicas=None
[2025-06-04 12:50:37]  scope=mc23_13p6TeV
[2025-06-04 12:50:37]  status=None
[2025-06-04 12:50:37]  status_code=0
[2025-06-04 12:50:37]  storage_token=
[2025-06-04 12:50:37]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677976068/log.45006595._043043.job.log.tgz.1
[2025-06-04 12:50:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/ea/log.45006595._043043.job.log.tgz.1
[2025-06-04 12:50:37]  workdir=None
[2025-06-04 12:50:37] ]
[2025-06-04 12:50:37] 2025-06-04 10:50:10,268 | INFO     | transferring file log.45006595._043043.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677976068/log.45006595._043043.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 12:50:37] 2025-06-04 10:50:10,268 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677976068/log.45006595._043043.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0430
[2025-06-04 12:50:37] 2025-06-04 10:50:10,283 | INFO     | adding to output.list: log.45006595._043043.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/ea/log.45006595._043043.job.log.tg
[2025-06-04 12:50:37] 2025-06-04 10:50:10,283 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:50:37] 2025-06-04 10:50:10,283 | INFO     | summary of transferred files:
[2025-06-04 12:50:37] 2025-06-04 10:50:10,283 | INFO     |  -- lfn=log.45006595._043043.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:50:37] 2025-06-04 10:50:10,283 | INFO     | stage-out finished correctly
[2025-06-04 12:50:37] 2025-06-04 10:50:12,782 | WARNING  | process 1850716 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:50:37] 2025-06-04 10:50:12,782 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677976068/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:50:37] 2025-06-04 10:50:12,817 | INFO     | number of running child processes to parent process 1850716: 1
[2025-06-04 12:50:37] 2025-06-04 10:50:12,817 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:50:37] 2025-06-04 10:50:13,677 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:50:37] 2025-06-04 10:50:15,110 | INFO     | job 6677976068 has state=finished
[2025-06-04 12:50:37] 2025-06-04 10:50:15,110 | INFO     | preparing for final server update for job 6677976068 in state='finished'
[2025-06-04 12:50:37] 2025-06-04 10:50:15,111 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:50:37] 2025-06-04 10:50:15,111 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:50:37] 2025-06-04 10:50:15,111 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:50:37] 2025-06-04 10:50:15,111 | INFO     | job 6677976068 has finished - writing final server update
[2025-06-04 12:50:37] 2025-06-04 10:50:15,111 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:50:37] 2025-06-04 10:50:15,112 | INFO     | executing command: lscpu
[2025-06-04 12:50:37] 2025-06-04 10:50:15,129 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:50:37] 2025-06-04 10:50:15,320 | INFO     | monitor loop #324: job 0:6677976068 is in state 'finished'
[2025-06-04 12:50:37] 2025-06-04 10:50:15,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:50:37] 2025-06-04 10:50:17,529 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:50:37] 2025-06-04 10:50:17,529 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677976068/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:50:37] 2025-06-04 10:50:17,529 | INFO     | extracted standard info from prmon json
[2025-06-04 12:50:37] 2025-06-04 10:50:17,529 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:50:37] 2025-06-04 10:50:17,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:50:37] 2025-06-04 10:50:17,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:50:37] 2025-06-04 10:50:17,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:50:37] 2025-06-04 10:50:17,530 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:50:37] 2025-06-04 10:50:17,530 | INFO     | sum of square deviations: 73882315.5
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | sum of deviations: -6124782500.499999
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | mean x: 1749032204.5
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | mean y: 2518692.2419354836
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | -- intersect: 144995833620.66397
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | intersect: 144995833620.66397
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | chi2: 0.056307771509322715
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | -- intersect: 144995833620.66397
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | current memory leak: -82.90 B/s (using 62 data points, chi2=0.06)
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | ..............................
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | . Timing measurements:
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | . get job = 0 s
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | . initial setup = 1 s
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | . payload setup = 3 s
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | . stage-in = 0 s
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | . payload execution = 4169 s
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | . stage-out = 0 s
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | . log creation = 0 s
[2025-06-04 12:50:37] 2025-06-04 10:50:17,531 | INFO     | ..............................
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | 
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | job summary report
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | --------------------------------------------------
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | PanDA job id: 6677976068
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | task id: 45006595
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | errors: (none)
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | pilot state: finished 
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | transexitcode: 0
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | exeerrorcode: 0
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | exeerrordiag: 
[2025-06-04 12:50:37] 2025-06-04 10:50:17,828 | INFO     | exitcode: 0
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | exitmsg: OK
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | cpuconsumptiontime: 11934 s
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | nevents: 400
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | neventsw: 0
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | pid: 1850716
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | pgrp: 1850716
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | corecount: 3
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | event service: False
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | sizes: {0: 2405187, 2: 2405393, 10: 2405421, 4176: 2431468, 4178: 2440415, 4181: 2440471, 4185: 2440769}
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | --------------------------------------------------
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | 
[2025-06-04 12:50:37] 2025-06-04 10:50:17,829 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:50:37] 2025-06-04 10:50:17,846 | INFO     | job 6677976068 has completed (purged errors)
[2025-06-04 12:50:37] 2025-06-04 10:50:17,846 | INFO     | overall cleanup function is called
[2025-06-04 12:50:37] 2025-06-04 10:50:18,852 | INFO     | --- collectZombieJob: --- 10, [1850716]
[2025-06-04 12:50:37] 2025-06-04 10:50:18,853 | INFO     | zombie collector waiting for pid 1850716
[2025-06-04 12:50:37] 2025-06-04 10:50:18,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:50:37] 2025-06-04 10:50:18,853 | INFO     | collected zombie processes
[2025-06-04 12:50:37] 2025-06-04 10:50:18,853 | INFO     | will attempt to kill all subprocesses of pid=1850716
[2025-06-04 12:50:37] 2025-06-04 10:50:18,893 | INFO     | process IDs to be killed: [1850716] (in reverse order)
[2025-06-04 12:50:37] 2025-06-04 10:50:18,918 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:50:37] 2025-06-04 10:50:18,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:50:37] 2025-06-04 10:50:18,919 | INFO     | did not find any defunct processes belonging to 1850716
[2025-06-04 12:50:37] 2025-06-04 10:50:18,920 | INFO     | did not find any defunct processes belonging to 1850716
[2025-06-04 12:50:37] 2025-06-04 10:50:18,920 | INFO     | ready for new job
[2025-06-04 12:50:37] 2025-06-04 10:50:18,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:50:37] 2025-06-04 10:50:18,921 | INFO     | **************************************
[2025-06-04 12:50:37] 2025-06-04 10:50:18,921 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:50:37] 2025-06-04 10:50:18,921 | INFO     | **************************************
[2025-06-04 12:50:37] 2025-06-04 10:50:18,921 | INFO     | 
[2025-06-04 12:50:37] 2025-06-04 10:50:18,921 | INFO     | architecture information:
[2025-06-04 12:50:37] 2025-06-04 10:50:18,922 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:50:37] 2025-06-04 10:50:18,930 | INFO     | cat /etc/os-release:
[2025-06-04 12:50:37] NAME="CentOS Linux"
[2025-06-04 12:50:37] VERSION="7 (Core)"
[2025-06-04 12:50:37] ID="centos"
[2025-06-04 12:50:37] ID_LIKE="rhel fedora"
[2025-06-04 12:50:37] VERSION_ID="7"
[2025-06-04 12:50:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:50:37] ANSI_COLOR="0;31"
[2025-06-04 12:50:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:50:37] HOME_URL="https://www.centos.org/"
[2025-06-04 12:50:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:50:37] 
[2025-06-04 12:50:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:50:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:50:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:50:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:50:37] 
[2025-06-04 12:50:37] 2025-06-04 10:50:18,931 | INFO     | **************************************
[2025-06-04 12:50:37] 2025-06-04 10:50:19,433 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 12:50:37] 2025-06-04 10:50:19,444 | INFO     | sufficient remaining disk space (268733251584 B)
[2025-06-04 12:50:37] 2025-06-04 10:50:19,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:50:37] 2025-06-04 10:50:19,444 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:50:37] 2025-06-04 10:50:19,444 | INFO     | update_server=False
[2025-06-04 12:50:37] 2025-06-04 10:50:19,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:50:37] 2025-06-04 10:50:19,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:50:37] 2025-06-04 10:50:19,444 | INFO     | aborting loop
[2025-06-04 12:50:37] 2025-06-04 10:50:19,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:50:37] 2025-06-04 10:50:19,448 | INFO     | PID=1844218 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 12:50:37] 2025-06-04 10:50:19,448 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:50:37] 2025-06-04 10:50:19,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:50:37] 2025-06-04 10:50:19,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:50:37] 2025-06-04 10:50:19,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:50:37] 2025-06-04 10:50:19,841 | INFO     | all job control threads have been joined
[2025-06-04 12:50:37] 2025-06-04 10:50:20,309 | INFO     | all payload control threads have been joined
[2025-06-04 12:50:37] 2025-06-04 10:50:20,439 | INFO     | all data control threads have been joined
[2025-06-04 12:50:37] 2025-06-04 10:50:20,450 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:20,450 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:20,451 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:20,470 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:20,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:50:37] 2025-06-04 10:50:20,847 | INFO     | [job] control thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:21,011 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:21,315 | INFO     | [payload] control thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:21,442 | INFO     | [data] control thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:21,470 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:21,772 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:21,789 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:21,844 | INFO     | [job] validate thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:21,847 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:22,836 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:23,723 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:30,494 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:50:37] 2025-06-04 10:50:31,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:50:37] 2025-06-04 10:50:31,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139714384594752)>', '<ExcThread(monitor, started 139713004435200)>']
[2025-06-04 12:50:37] 2025-06-04 10:50:32,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:50:37] 2025-06-04 10:50:32,514 | INFO     | [monitor] control thread has ended
[2025-06-04 12:50:37] 2025-06-04 10:50:36,949 | INFO     | all workflow threads have been joined
[2025-06-04 12:50:37] 2025-06-04 10:50:36,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:50:37] 2025-06-04 10:50:36,950 | INFO     | traces error code: 0
[2025-06-04 12:50:37] 2025-06-04 10:50:36,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:50:37] 2025-06-04 10:50:37,000 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:50:37] 2025-06-04 10:50:37,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:50:37] 2025-06-04 10:50:37,005 [wrapper] pilotpid: 1844218
[2025-06-04 12:50:37] 2025-06-04 10:50:37,008 [wrapper] Pilot exit status: 0
[2025-06-04 12:50:37] 2025-06-04 10:50:37,016 [wrapper] pandaids: 6677976068
[2025-06-04 12:50:37] 2025-06-04 10:50:37,033 [wrapper] cleanup supervisor_pilot 1860045 1844219
[2025-06-04 12:50:37] 2025-06-04 10:50:37,035 [wrapper] Test setup, not cleaning
[2025-06-04 12:50:37] 2025-06-04 10:50:37,038 [wrapper] apfmon messages muted
[2025-06-04 12:50:37] 2025-06-04 10:50:37,040 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:50:37] 2025-06-04 10:50:37,043 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:50:37]  *** Error codes and diagnostics ***
[2025-06-04 12:50:37]     "exeErrorCode": 0,
[2025-06-04 12:50:37]     "exeErrorDiag": "",
[2025-06-04 12:50:37]     "pilotErrorCode": 0,
[2025-06-04 12:50:37]     "pilotErrorDiag": "",
[2025-06-04 12:50:37]  *** Listing of results directory ***
[2025-06-04 12:50:37] total 386804
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:02 queuedata.json
[2025-06-04 12:50:37] -rwx------ 1 boinc boinc     37140 Jun  3 21:03 runpilot2-wrapper.sh
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:50:37] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:40 run_atlas
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:40 job.xml
[2025-06-04 12:50:37] -rw-r--r-- 2 boinc boinc 215214179 Jun  4 11:40 EVNT.45006593._001725.pool.root.1
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc      6929 Jun  4 11:40 init_data.xml
[2025-06-04 12:50:37] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:40 shared
[2025-06-04 12:50:37] -rw-r--r-- 2 boinc boinc    508884 Jun  4 11:40 input.tar.gz
[2025-06-04 12:50:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:40 start_atlas.sh
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:40 boinc_lockfile
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc      2525 Jun  4 11:40 pandaJob.out
[2025-06-04 12:50:37] -rw------- 1 boinc boinc    986766 Jun  4 11:40 agis_schedconf.cvmfs.json
[2025-06-04 12:50:37] -rw------- 1 boinc boinc   1603667 Jun  4 11:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:50:37] drwx------ 4 boinc boinc      4096 Jun  4 11:40 pilot3
[2025-06-04 12:50:37] -rw------- 1 boinc boinc        95 Jun  4 12:49 pilot_heartbeat.json
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:49 boinc_task_state.xml
[2025-06-04 12:50:37] -rw------- 1 boinc boinc 175729449 Jun  4 12:49 HITS.45006595._043043.pool.root.1
[2025-06-04 12:50:37] -rw------- 1 boinc boinc      1017 Jun  4 12:50 memory_monitor_summary.json
[2025-06-04 12:50:37] -rw------- 1 boinc boinc    235566 Jun  4 12:50 log.45006595._043043.job.log.tgz.1
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:50 boinc_mmap_file
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:50 wrapper_checkpoint.txt
[2025-06-04 12:50:37] -rw------- 1 boinc boinc      7650 Jun  4 12:50 heartbeat.json
[2025-06-04 12:50:37] -rw------- 1 boinc boinc      4748 Jun  4 12:50 pilotlog.txt
[2025-06-04 12:50:37] -rw------- 1 boinc boinc    416607 Jun  4 12:50 log.45006595._043043.job.log.1
[2025-06-04 12:50:37] -rw------- 1 boinc boinc       357 Jun  4 12:50 output.list
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:50 runtime_log
[2025-06-04 12:50:37] -rw------- 1 boinc boinc    675840 Jun  4 12:50 result.tar.gz
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc      8733 Jun  4 12:50 runtime_log.err
[2025-06-04 12:50:37] -rw------- 1 boinc boinc       658 Jun  4 12:50 QoONDmS6lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXplKDmKL63Gm.diag
[2025-06-04 12:50:37] -rw-r--r-- 1 boinc boinc     21437 Jun  4 12:50 stderr.txt
[2025-06-04 12:50:37] HITS file was successfully produced:
[2025-06-04 12:50:37] -rw------- 1 boinc boinc 175729449 Jun  4 12:49 shared/HITS.pool.root.1
[2025-06-04 12:50:37]  *** Contents of shared directory: ***
[2025-06-04 12:50:37] total 382968
[2025-06-04 12:50:37] -rw-r--r-- 2 boinc boinc 215214179 Jun  4 11:40 ATLAS.root_0
[2025-06-04 12:50:37] -rw-r--r-- 2 boinc boinc    508884 Jun  4 11:40 input.tar.gz
[2025-06-04 12:50:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:40 start_atlas.sh
[2025-06-04 12:50:37] -rw------- 1 boinc boinc 175729449 Jun  4 12:49 HITS.pool.root.1
[2025-06-04 12:50:37] -rw------- 1 boinc boinc    675840 Jun  4 12:50 result.tar.gz
12:50:38 (1840585): run_atlas exited; CPU time 11944.142423
12:50:38 (1840585): called boinc_finish(0)

</stderr_txt>
]]>

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