Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 20:52:12 (23508): Detected: vboxwrapper 26206
2025-06-03 20:52:12 (23508): Detected: BOINC client v8.0.2
2025-06-03 20:52:14 (23508): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-06-03 20:52:14 (23508): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 20:52:15 (23508): Create VM. (boinc_4761cdd412f261dd, slot#0)
2025-06-03 20:52:15 (23508): Setting Memory Size for VM. (4400MB)
2025-06-03 20:52:15 (23508): Setting CPU Count for VM. (4)
2025-06-03 20:52:16 (23508): Setting Chipset Options for VM.
2025-06-03 20:52:16 (23508): Setting Graphics Controller Options for VM.
2025-06-03 20:52:16 (23508): Setting Boot Options for VM.
2025-06-03 20:52:16 (23508): Setting Network Configuration for NAT.
2025-06-03 20:52:17 (23508): Enabling VM Network Access.
2025-06-03 20:52:17 (23508): Disabling USB Support for VM.
2025-06-03 20:52:17 (23508): Disabling COM Port Support for VM.
2025-06-03 20:52:18 (23508): Disabling LPT Port Support for VM.
2025-06-03 20:52:18 (23508): Disabling Audio Support for VM.
2025-06-03 20:52:18 (23508): Disabling Clipboard Support for VM.
2025-06-03 20:52:18 (23508): Disabling Drag and Drop Support for VM.
2025-06-03 20:52:19 (23508): Adding storage controller(s) to VM.
2025-06-03 20:52:19 (23508): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 20:52:22 (23508): Adding VirtualBox Guest Additions to VM.
2025-06-03 20:52:22 (23508): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 20:52:22 (23508): forwarding host port 53670 to guest port 80
2025-06-03 20:52:23 (23508): Enabling remote desktop for VM.
2025-06-03 20:52:23 (23508): Required extension pack not installed, remote desktop not enabled.
2025-06-03 20:52:23 (23508): Enabling shared directory for VM.
2025-06-03 20:52:23 (23508): Starting VM using VBoxManage interface. (boinc_4761cdd412f261dd, slot#0)
2025-06-03 20:52:30 (23508): Successfully started VM. (PID = '21184')
2025-06-03 20:52:30 (23508): Reporting VM Process ID to BOINC.
2025-06-03 20:52:30 (23508): Guest Log: BIOS: VirtualBox 7.1.4
2025-06-03 20:52:30 (23508): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 20:52:30 (23508): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 20:52:30 (23508): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 20:52:30 (23508): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 20:52:30 (23508): Detected: Web Application Enabled (http://localhost:53670)
2025-06-03 20:52:30 (23508): Preference change detected
2025-06-03 20:52:30 (23508): Setting CPU throttle for VM. (90%)
2025-06-03 20:52:30 (23508): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 20:52:32 (23508): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 20:52:32 (23508): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 20:52:35 (23508): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 20:52:35 (23508): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 20:52:35 (23508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 20:52:41 (23508): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 20:52:41 (23508): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 20:52:45 (23508): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 20:52:45 (23508): Guest Log: 00:00:00.000072 main     Log opened 2025-06-03T20:52:43.069180000Z
2025-06-03 20:52:45 (23508): Guest Log: 00:00:00.000139 main     OS Product: Linux
2025-06-03 20:52:45 (23508): Guest Log: 00:00:00.000164 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 20:52:45 (23508): Guest Log: 00:00:00.000185 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 20:52:45 (23508): Guest Log: 00:00:00.000206 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 20:52:45 (23508): Guest Log: 00:00:00.000206 main     Process ID: 1309
2025-06-03 20:52:45 (23508): Guest Log: 00:00:00.000207 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 20:52:45 (23508): Guest Log: 00:00:00.001038 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 20:52:45 (23508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 20:52:45 (23508): Guest Log: [INFO] Mounting shared directory
2025-06-03 20:52:45 (23508): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 20:52:49 (23508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 20:52:49 (23508): Guest Log: [INFO] Detected branch: prod
2025-06-03 20:52:50 (23508): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 20:52:50 (23508): Guest Log: Copying input files
2025-06-03 20:52:50 (23508): Guest Log: Copied input files into RunAtlas.
2025-06-03 20:52:51 (23508): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-03 20:52:51 (23508): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-03 20:52:51 (23508): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-03 20:52:51 (23508): Guest Log: Further information can be found at the LHC@home message board.
2025-06-03 20:52:55 (23508): Guest Log: 00:00:10.077318 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 569 903 000ns (GuestNow=1 748 998 374 641 152 000 ns GuestLast=1 748 983 963 071 249 000 ns fSetTimeLastLoop=true )
2025-06-03 20:52:58 (23508): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 20:52:58 (23508): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 20:52:58 (23508): Guest Log: 2.6.3.0 1588 0 32184 146762 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-03 20:52:59 (23508): Guest Log: copied the webapp to /var/www
2025-06-03 20:52:59 (23508): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-03 20:52:59 (23508): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-03 20:52:59 (23508): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 20:52:59 (23508): Guest Log:  *** Starting ATLAS job. (PandaID=6678071114 taskID=45006595) ***
2025-06-03 20:53:23 (23508): VM state change detected. (old = 'running', new = 'paused')
2025-06-03 20:53:43 (23508): VM state change detected. (old = 'paused', new = 'running')
2025-06-03 20:58:53 (23508): VM state change detected. (old = 'running', new = 'paused')
2025-06-03 20:59:14 (23508): VM state change detected. (old = 'paused', new = 'running')
2025-06-03 21:58:58 (23508): VM state change detected. (old = 'running', new = 'paused')
2025-06-03 21:59:18 (23508): VM state change detected. (old = 'paused', new = 'running')
2025-06-03 22:15:22 (23508): Guest Log:  *** Job finished ***
2025-06-03 22:15:22 (23508): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:11,506 | INFO     | [data] queue_monitor thread has finished
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:14,936 | INFO     | job.realtimelogging is not enabled
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:15,938 | INFO     | [payload] run_realtimelog thread has finished
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:16,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135106791232)>', '<ExcThread(monitor, started 140134355814144)>']
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:16,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:16,704 | INFO     | [monitor] control thread has ended
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,546 | INFO     | all workflow threads have been joined
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,547 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,547 | INFO     | traces error code: 0
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,599 [wrapper] ==== pilot stdout END ====
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,601 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,604 [wrapper] pilotpid: 5902
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,606 [wrapper] Pilot exit status: 0
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,765 [wrapper] pandaids: 6678071114
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,781 [wrapper] cleanup supervisor_pilot  1732 5903
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,785 [wrapper] Test setup, not cleaning
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,787 [wrapper] apfmon messages muted
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,790 [wrapper] ==== wrapper stdout END ====
2025-06-03 22:15:22 (23508): Guest Log: 2025-06-04 02:14:21,792 [wrapper] ==== wrapper stderr END ====
2025-06-03 22:15:22 (23508): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 22:15:22 (23508): Guest Log:     "exeErrorCode": 0,
2025-06-03 22:15:22 (23508): Guest Log:     "exeErrorDiag": "",
2025-06-03 22:15:22 (23508): Guest Log:     "pilotErrorCode": 0,
2025-06-03 22:15:22 (23508): Guest Log:     "pilotErrorDiag": "",
2025-06-03 22:15:22 (23508): Guest Log:  *** Listing of results directory ***
2025-06-03 22:15:22 (23508): Guest Log: total 180284
2025-06-03 22:15:22 (23508): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 20:36 pilot3.tar.gz
2025-06-03 22:15:22 (23508): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 20:38 runpilot2-wrapper.sh
2025-06-03 22:15:22 (23508): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 20:38 queuedata.json
2025-06-03 22:15:22 (23508): Guest Log: -rwxr-xr-x. 1 atlas atlas     12241 Jun  4 00:52 init_data.xml
2025-06-03 22:15:22 (23508): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Jun  4 00:52 input.tar.gz
2025-06-03 22:15:22 (23508): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 00:52 start_atlas.sh
2025-06-03 22:15:22 (23508): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 00:52 EVNT.45006593._001804.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 22:15:22 (23508): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 00:52 pandaJob.out
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas    986069 Jun  4 00:53 agis_schedconf.cvmfs.json
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  4 00:53 agis_ddmendpoints.agis.ALL.json
2025-06-03 22:15:22 (23508): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 00:53 pilot3
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 02:13 pilot_heartbeat.json
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas 179506297 Jun  4 02:13 HITS.45006595._044976.pool.root.1
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas      1029 Jun  4 02:13 memory_monitor_summary.json
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas    243422 Jun  4 02:13 log.45006595._044976.job.log.tgz.1
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas      7679 Jun  4 02:14 heartbeat.json
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas      4485 Jun  4 02:14 pilotlog.txt
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas    428299 Jun  4 02:14 log.45006595._044976.job.log.1
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 02:14 output.list
2025-06-03 22:15:22 (23508): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 02:14 runtime_log
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas    686080 Jun  4 02:14 result.tar.gz
2025-06-03 22:15:22 (23508): Guest Log: -rw-r--r--. 1 atlas atlas      8591 Jun  4 02:14 runtime_log.err
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas       655 Jun  4 02:14 A5JODm5Zng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmM4lKDm4MLfMn.diag
2025-06-03 22:15:22 (23508): Guest Log: Looking for outputfile HITS.45006595._044976.pool.root.1
2025-06-03 22:15:22 (23508): Guest Log: HITS file was successfully produced
2025-06-03 22:15:22 (23508): Guest Log: -rw-------. 1 atlas atlas 179506297 Jun  4 02:13 /home/atlas/RunAtlas/HITS.45006595._044976.pool.root.1
2025-06-03 22:15:22 (23508): Guest Log: Successfully finished the ATLAS job!
2025-06-03 22:15:22 (23508): Guest Log: Copying the results back to the shared directory!
2025-06-03 22:15:23 (23508): Guest Log:  *** Contents of shared directory: ***
2025-06-03 22:15:23 (23508): Guest Log: total 386456
2025-06-03 22:15:23 (23508): Guest Log: -rwxrwxrwx. 1 root root 214991441 Jun  4 00:52 ATLAS.root_0
2025-06-03 22:15:23 (23508): Guest Log: -rwxrwxrwx. 1 root root 179506297 Jun  4  2025 HITS.pool.root.1
2025-06-03 22:15:23 (23508): Guest Log: -rwxrwxrwx. 1 root root     12241 Jun  4 00:52 init_data.xml
2025-06-03 22:15:23 (23508): Guest Log: -rwxrwxrwx. 1 root root    508880 Jun  4 00:51 input.tar.gz
2025-06-03 22:15:23 (23508): Guest Log: -rwxrwxrwx. 1 root root    686080 Jun  4  2025 result.tar.gz
2025-06-03 22:15:23 (23508): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 00:51 start_atlas.sh
2025-06-03 22:15:23 (23508): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 22:15:23 (23508): VM Completion File Detected.
2025-06-03 22:15:23 (23508): Powering off VM.
2025-06-03 22:15:23 (23508): Successfully stopped VM.
2025-06-03 22:15:23 (23508): Deregistering VM. (boinc_4761cdd412f261dd, slot#0)
2025-06-03 22:15:24 (23508): Removing network bandwidth throttle group from VM.
2025-06-03 22:15:24 (23508): Removing VM from VirtualBox.
22:15:29 (23508): called boinc_finish(0)

</stderr_txt>
]]>

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