Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:06:33 (797068): wrapper (7.7.26015): starting
21:06:33 (797068): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:06:33] Arguments: --nthreads 8
[2025-06-03 21:06:33] Threads: 8
[2025-06-03 21:06:33] Checking for CVMFS
[2025-06-03 21:06:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:06:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:06:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:06:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:06:33] 2.12.6.0 7692 36625 177940 146762 1 848 33666846 40960001 38834 16776704 1 457677719 99.768 270530318 34466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 21:06:33] CVMFS is ok
[2025-06-03 21:06:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:06:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:06:33] Further information can be found at the LHC@home message board.
[2025-06-03 21:06:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:06:33] Checking for apptainer binary...
[2025-06-03 21:06:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:06:33] Running /usr/bin/apptainer --version
[2025-06-03 21:06:33] apptainer version 1.4.1-1.el9
[2025-06-03 21:06:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:06:34] c8-7-4.aglt2.org
[2025-06-03 21:06:34] apptainer works
[2025-06-03 21:06:34] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:06:34] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:06:34] Starting ATLAS job with PandaID=6678071195
[2025-06-03 21:06:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:59:32]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:59:32]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 21:59:32]  is_altstaged=None
[2025-06-03 21:59:32]  is_tar=False
[2025-06-03 21:59:32]  lfn=log.45006595._045057.job.log.tgz.1
[2025-06-03 21:59:32]  mtime=0
[2025-06-03 21:59:32]  protocol_id=None
[2025-06-03 21:59:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 21:59:32]  replicas=None
[2025-06-03 21:59:32]  scope=mc23_13p6TeV
[2025-06-03 21:59:32]  status=None
[2025-06-03 21:59:32]  status_code=0
[2025-06-03 21:59:32]  storage_token=
[2025-06-03 21:59:32]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678071195/log.45006595._045057.job.log.tgz.1
[2025-06-03 21:59:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/34/log.45006595._045057.job.log.tgz.1
[2025-06-03 21:59:32]  workdir=None
[2025-06-03 21:59:32] ]
[2025-06-03 21:59:32] 2025-06-04 01:59:10,968 | INFO     | transferring file log.45006595._045057.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678071195/log.45006595._045057.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:59:32] 2025-06-04 01:59:10,968 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678071195/log.45006595._045057.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._045057.job
[2025-06-03 21:59:32] 2025-06-04 01:59:10,987 | INFO     | adding to output.list: log.45006595._045057.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/34/log.45006595._045057.job.log.tg
[2025-06-03 21:59:32] 2025-06-04 01:59:10,988 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:59:32] 2025-06-04 01:59:10,988 | INFO     | summary of transferred files:
[2025-06-03 21:59:32] 2025-06-04 01:59:10,988 | INFO     |  -- lfn=log.45006595._045057.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:59:32] 2025-06-04 01:59:10,988 | INFO     | stage-out finished correctly
[2025-06-03 21:59:32] 2025-06-04 01:59:12,456 | INFO     | monitor loop #228: job 0:6678071195 is in state 'finished'
[2025-06-03 21:59:32] 2025-06-04 01:59:12,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:59:32] 2025-06-04 01:59:13,370 | INFO     | PID=802828 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 21:59:32] 2025-06-04 01:59:13,371 | INFO     | .. there are 55 such processes running
[2025-06-03 21:59:32] 2025-06-04 01:59:13,798 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:59:32] 2025-06-04 01:59:14,243 | INFO     | job 6678071195 has state=finished
[2025-06-03 21:59:32] 2025-06-04 01:59:14,244 | INFO     | preparing for final server update for job 6678071195 in state='finished'
[2025-06-03 21:59:32] 2025-06-04 01:59:14,244 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:59:32] 2025-06-04 01:59:14,244 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:59:32] 2025-06-04 01:59:14,244 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:59:32] 2025-06-04 01:59:14,244 | INFO     | job 6678071195 has finished - writing final server update
[2025-06-03 21:59:32] 2025-06-04 01:59:14,244 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:59:32] 2025-06-04 01:59:14,262 | INFO     | executing command: lscpu
[2025-06-03 21:59:32] 2025-06-04 01:59:14,350 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:59:32] 2025-06-04 01:59:14,961 | INFO     | monitor loop #229: job 0:6678071195 is in state 'finished'
[2025-06-03 21:59:32] 2025-06-04 01:59:14,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:59:32] 2025-06-04 01:59:17,466 | INFO     | monitor loop #230: job 0:6678071195 is in state 'finished'
[2025-06-03 21:59:32] 2025-06-04 01:59:17,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:59:32] 2025-06-04 01:59:18,356 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 21:59:32] 2025-06-04 01:59:18,356 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678071195/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:59:32] 2025-06-04 01:59:18,357 | INFO     | extracted standard info from prmon json
[2025-06-03 21:59:32] 2025-06-04 01:59:18,357 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:59:32] 2025-06-04 01:59:18,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:59:32] 2025-06-04 01:59:18,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:59:32] 2025-06-04 01:59:18,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | sum of square deviations: 28242390.0
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | sum of deviations: 5126845406.0
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | mean x: 1749000876.0
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | mean y: 2405113.6666666665
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | -- intersect: -317493993251.0105
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | intersect: -317493993251.0105
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | chi2: 0.6812471141098597
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | -- intersect: -317493993251.0105
[2025-06-03 21:59:32] 2025-06-04 01:59:18,359 | INFO     | current memory leak: 181.53 B/s (using 45 data points, chi2=0.68)
[2025-06-03 21:59:32] 2025-06-04 01:59:18,360 | INFO     | ..............................
[2025-06-03 21:59:32] 2025-06-04 01:59:18,360 | INFO     | . Timing measurements:
[2025-06-03 21:59:32] 2025-06-04 01:59:18,360 | INFO     | . get job = 0 s
[2025-06-03 21:59:32] 2025-06-04 01:59:18,360 | INFO     | . initial setup = 2 s
[2025-06-03 21:59:32] 2025-06-04 01:59:18,360 | INFO     | . payload setup = 5 s
[2025-06-03 21:59:32] 2025-06-04 01:59:18,360 | INFO     | . stage-in = 0 s
[2025-06-03 21:59:32] 2025-06-04 01:59:18,360 | INFO     | . payload execution = 3124 s
[2025-06-03 21:59:32] 2025-06-04 01:59:18,361 | INFO     | . stage-out = 0 s
[2025-06-03 21:59:32] 2025-06-04 01:59:18,361 | INFO     | . log creation = 0 s
[2025-06-03 21:59:32] 2025-06-04 01:59:18,361 | INFO     | ..............................
[2025-06-03 21:59:32] 2025-06-04 01:59:18,417 | INFO     | 
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | job summary report
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | --------------------------------------------------
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | PanDA job id: 6678071195
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | task id: 45006595
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | errors: (none)
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | pilot state: finished 
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | transexitcode: 0
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | exeerrorcode: 0
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | exeerrordiag: 
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | exitcode: 0
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | exitmsg: OK
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | cpuconsumptiontime: 19981 s
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | nevents: 400
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | neventsw: 0
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | pid: 814115
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | pgrp: 814115
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | corecount: 8
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | event service: False
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 3130: 2430917, 3132: 2439858, 3135: 2439914, 3139: 2440212}
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | --------------------------------------------------
[2025-06-03 21:59:32] 2025-06-04 01:59:18,418 | INFO     | 
[2025-06-03 21:59:32] 2025-06-04 01:59:18,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 21:59:32] 2025-06-04 01:59:18,435 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,435 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,435 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | job 6678071195 has completed (purged errors)
[2025-06-03 21:59:32] 2025-06-04 01:59:18,436 | INFO     | overall cleanup function is called
[2025-06-03 21:59:32] 2025-06-04 01:59:19,443 | INFO     | --- collectZombieJob: --- 10, [814115]
[2025-06-03 21:59:32] 2025-06-04 01:59:19,443 | INFO     | zombie collector waiting for pid 814115
[2025-06-03 21:59:32] 2025-06-04 01:59:19,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:59:32] 2025-06-04 01:59:19,443 | INFO     | collected zombie processes
[2025-06-03 21:59:32] 2025-06-04 01:59:19,443 | INFO     | will attempt to kill all subprocesses of pid=814115
[2025-06-03 21:59:32] 2025-06-04 01:59:19,877 | INFO     | process IDs to be killed: [814115] (in reverse order)
[2025-06-03 21:59:32] 2025-06-04 01:59:20,041 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:59:32] 2025-06-04 01:59:20,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:59:32] 2025-06-04 01:59:20,066 | INFO     | did not find any defunct processes belonging to 814115
[2025-06-03 21:59:32] 2025-06-04 01:59:20,090 | INFO     | did not find any defunct processes belonging to 814115
[2025-06-03 21:59:32] 2025-06-04 01:59:20,091 | INFO     | ready for new job
[2025-06-03 21:59:32] 2025-06-04 01:59:20,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:59:32] 2025-06-04 01:59:20,092 | INFO     | **************************************
[2025-06-03 21:59:32] 2025-06-04 01:59:20,092 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:59:32] 2025-06-04 01:59:20,092 | INFO     | **************************************
[2025-06-03 21:59:32] 2025-06-04 01:59:20,092 | INFO     | 
[2025-06-03 21:59:32] 2025-06-04 01:59:20,110 | INFO     | architecture information:
[2025-06-03 21:59:32] 2025-06-04 01:59:20,110 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:59:32] 2025-06-04 01:59:20,123 | INFO     | cat /etc/os-release:
[2025-06-03 21:59:32] NAME="CentOS Linux"
[2025-06-03 21:59:32] VERSION="7 (Core)"
[2025-06-03 21:59:32] ID="centos"
[2025-06-03 21:59:32] ID_LIKE="rhel fedora"
[2025-06-03 21:59:32] VERSION_ID="7"
[2025-06-03 21:59:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:59:32] ANSI_COLOR="0;31"
[2025-06-03 21:59:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:59:32] HOME_URL="https://www.centos.org/"
[2025-06-03 21:59:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:59:32] 
[2025-06-03 21:59:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:59:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:59:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:59:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:59:32] 
[2025-06-03 21:59:32] 2025-06-04 01:59:20,123 | INFO     | **************************************
[2025-06-03 21:59:32] 2025-06-04 01:59:20,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 21:59:32] 2025-06-04 01:59:20,641 | INFO     | sufficient remaining disk space (171808129024 B)
[2025-06-03 21:59:32] 2025-06-04 01:59:20,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:59:32] 2025-06-04 01:59:20,642 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:59:32] 2025-06-04 01:59:20,642 | INFO     | update_server=False
[2025-06-03 21:59:32] 2025-06-04 01:59:20,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:59:32] 2025-06-04 01:59:20,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:59:32] 2025-06-04 01:59:20,856 | INFO     | all job control threads have been joined
[2025-06-03 21:59:32] 2025-06-04 01:59:20,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:59:32] 2025-06-04 01:59:20,974 | INFO     | aborting loop
[2025-06-03 21:59:32] 2025-06-04 01:59:21,101 | INFO     | all data control threads have been joined
[2025-06-03 21:59:32] 2025-06-04 01:59:21,355 | INFO     | all payload control threads have been joined
[2025-06-03 21:59:32] 2025-06-04 01:59:21,405 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:59:32] 2025-06-04 01:59:21,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:59:32] 2025-06-04 01:59:21,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:59:32] 2025-06-04 01:59:21,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:59:32] 2025-06-04 01:59:21,647 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:21,830 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:21,862 | INFO     | [job] control thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:21,924 | INFO     | [job] validate thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:21,980 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:22,095 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:22,106 | INFO     | [data] control thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:22,360 | INFO     | [payload] control thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:22,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:22,474 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:22,480 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:23,057 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:23,106 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:23,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:59:32] 2025-06-04 01:59:23,554 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:24,435 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:24,648 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:59:32] 2025-06-04 01:59:26,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136073238336)>', '<ExcThread(monitor, started 140135454734080)>']
[2025-06-03 21:59:32] 2025-06-04 01:59:27,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:59:32] 2025-06-04 01:59:27,438 | INFO     | [monitor] control thread has ended
[2025-06-03 21:59:32] 2025-06-04 01:59:31,659 | INFO     | all workflow threads have been joined
[2025-06-03 21:59:32] 2025-06-04 01:59:31,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:59:32] 2025-06-04 01:59:31,659 | INFO     | traces error code: 0
[2025-06-03 21:59:32] 2025-06-04 01:59:31,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:59:32] 2025-06-04 01:59:31,764 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:59:32] 2025-06-04 01:59:31,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:59:32] 2025-06-04 01:59:31,771 [wrapper] pilotpid: 802828
[2025-06-03 21:59:32] 2025-06-04 01:59:31,773 [wrapper] Pilot exit status: 0
[2025-06-03 21:59:32] 2025-06-04 01:59:31,796 [wrapper] pandaids: 6678071195
[2025-06-03 21:59:32] 2025-06-04 01:59:31,917 [wrapper] cleanup supervisor_pilot 1557021 802829
[2025-06-03 21:59:32] 2025-06-04 01:59:31,920 [wrapper] Test setup, not cleaning
[2025-06-03 21:59:32] 2025-06-04 01:59:31,923 [wrapper] apfmon messages muted
[2025-06-03 21:59:32] 2025-06-04 01:59:31,925 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:59:32] 2025-06-04 01:59:31,927 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:59:32]  *** Error codes and diagnostics ***
[2025-06-03 21:59:32]     "exeErrorCode": 0,
[2025-06-03 21:59:32]     "exeErrorDiag": "",
[2025-06-03 21:59:32]     "pilotErrorCode": 0,
[2025-06-03 21:59:32]     "pilotErrorDiag": "",
[2025-06-03 21:59:32]  *** Listing of results directory ***
[2025-06-03 21:59:32] total 386836
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 16:36 pilot3.tar.gz
[2025-06-03 21:59:32] -rwx------. 1 boincer umatlas     37140 Jun  3 16:39 runpilot2-wrapper.sh
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 16:40 queuedata.json
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas       100 Jun  3 21:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:59:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 21:06 run_atlas
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas       105 Jun  3 21:06 job.xml
[2025-06-03 21:59:32] -rw-r--r--. 2 boincer umatlas 215309956 Jun  3 21:06 EVNT.45006593._001807.pool.root.1
[2025-06-03 21:59:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:06 start_atlas.sh
[2025-06-03 21:59:32] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 21:06 shared
[2025-06-03 21:59:32] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 21:06 input.tar.gz
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas         0 Jun  3 21:06 boinc_lockfile
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 21:06 pandaJob.out
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas    986069 Jun  3 21:06 agis_schedconf.cvmfs.json
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:06 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:59:32] drwx------. 4 boincer umatlas      4096 Jun  3 21:06 pilot3
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas      7160 Jun  3 21:57 init_data.xml
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas        95 Jun  3 21:58 pilot_heartbeat.json
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas       529 Jun  3 21:58 boinc_task_state.xml
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas 175720662 Jun  3 21:58 HITS.45006595._045057.pool.root.1
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas      1042 Jun  3 21:59 memory_monitor_summary.json
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas    299606 Jun  3 21:59 log.45006595._045057.job.log.tgz.1
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas      7703 Jun  3 21:59 heartbeat.json
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:59 boinc_mmap_file
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas        27 Jun  3 21:59 wrapper_checkpoint.txt
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas      4354 Jun  3 21:59 pilotlog.txt
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas    324754 Jun  3 21:59 log.45006595._045057.job.log.1
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas       357 Jun  3 21:59 output.list
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:59 runtime_log
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas    645120 Jun  3 21:59 result.tar.gz
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 21:59 runtime_log.err
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas       653 Jun  3 21:59 QXJODmObng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD5lKDmhrxqBo.diag
[2025-06-03 21:59:32] -rw-r--r--. 1 boincer umatlas     21429 Jun  3 21:59 stderr.txt
[2025-06-03 21:59:32] HITS file was successfully produced:
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas 175720662 Jun  3 21:58 shared/HITS.pool.root.1
[2025-06-03 21:59:32]  *** Contents of shared directory: ***
[2025-06-03 21:59:32] total 383024
[2025-06-03 21:59:32] -rw-r--r--. 2 boincer umatlas 215309956 Jun  3 21:06 ATLAS.root_0
[2025-06-03 21:59:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:06 start_atlas.sh
[2025-06-03 21:59:32] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 21:06 input.tar.gz
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas 175720662 Jun  3 21:58 HITS.pool.root.1
[2025-06-03 21:59:32] -rw-------. 1 boincer umatlas    645120 Jun  3 21:59 result.tar.gz
21:59:33 (797068): run_atlas exited; CPU time 19990.991993
21:59:33 (797068): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN