Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:27:03 (775989): wrapper (7.7.26015): starting
13:27:03 (775989): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 13:27:03] Arguments: --nthreads 3
[2025-06-04 13:27:03] Threads: 3
[2025-06-04 13:27:03] Checking for CVMFS
[2025-06-04 13:27:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:27:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:27:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:27:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:27:04] 2.9.2.0 749385 84 48840 146778 3 56 32970837 36864000 0 130560 0 66879 99.987 2674 18830 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 13:27:04] CVMFS is ok
[2025-06-04 13:27:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:27:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:27:04] Further information can be found at the LHC@home message board.
[2025-06-04 13:27:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:27:04] Checking for apptainer binary...
[2025-06-04 13:27:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:27:04] Running /usr/bin/apptainer --version
[2025-06-04 13:27:04] apptainer version 1.3.6-6.1
[2025-06-04 13:27:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:27:04] thA359
[2025-06-04 13:27:04] apptainer works
[2025-06-04 13:27:04] Set ATHENA_PROC_NUMBER=3
[2025-06-04 13:27:04] Set ATHENA_CORE_NUMBER=3
[2025-06-04 13:27:04] Starting ATLAS job with PandaID=6678071204
[2025-06-04 13:27:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:54:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:54:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:54:59]  replicas=None
[2025-06-04 14:54:59]  scope=mc23_13p6TeV
[2025-06-04 14:54:59]  status=None
[2025-06-04 14:54:59]  status_code=0
[2025-06-04 14:54:59]  storage_token=
[2025-06-04 14:54:59]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678071204/log.45006595._045066.job.log.tgz.1
[2025-06-04 14:54:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/83/log.45006595._045066.job.log.tgz.1
[2025-06-04 14:54:59]  workdir=None
[2025-06-04 14:54:59] ]
[2025-06-04 14:54:59] 2025-06-04 12:54:28,910 | INFO     | transferring file log.45006595._045066.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678071204/log.45006595._045066.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 14:54:59] 2025-06-04 12:54:28,910 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678071204/log.45006595._045066.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0450
[2025-06-04 14:54:59] 2025-06-04 12:54:28,923 | INFO     | adding to output.list: log.45006595._045066.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/83/log.45006595._045066.job.log.tg
[2025-06-04 14:54:59] 2025-06-04 12:54:28,923 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:54:59] 2025-06-04 12:54:28,923 | INFO     | summary of transferred files:
[2025-06-04 14:54:59] 2025-06-04 12:54:28,923 | INFO     |  -- lfn=log.45006595._045066.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:54:59] 2025-06-04 12:54:28,923 | INFO     | stage-out finished correctly
[2025-06-04 14:54:59] 2025-06-04 12:54:28,974 | INFO     | monitor loop #401: job 0:6678071204 is in state 'finished'
[2025-06-04 14:54:59] 2025-06-04 12:54:28,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:54:59] 2025-06-04 12:54:29,257 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:54:59] 2025-06-04 12:54:31,478 | INFO     | monitor loop #402: job 0:6678071204 is in state 'finished'
[2025-06-04 14:54:59] 2025-06-04 12:54:31,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:54:59] 2025-06-04 12:54:32,137 | INFO     | job 6678071204 has state=finished
[2025-06-04 14:54:59] 2025-06-04 12:54:32,138 | INFO     | preparing for final server update for job 6678071204 in state='finished'
[2025-06-04 14:54:59] 2025-06-04 12:54:32,139 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:54:59] 2025-06-04 12:54:32,139 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:54:59] 2025-06-04 12:54:32,139 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:54:59] 2025-06-04 12:54:32,140 | INFO     | job 6678071204 has finished - writing final server update
[2025-06-04 14:54:59] 2025-06-04 12:54:32,140 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:54:59] 2025-06-04 12:54:32,143 | INFO     | executing command: lscpu
[2025-06-04 14:54:59] 2025-06-04 12:54:32,156 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:54:59] 2025-06-04 12:54:33,981 | INFO     | monitor loop #403: job 0:6678071204 is in state 'finished'
[2025-06-04 14:54:59] 2025-06-04 12:54:33,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:54:59] 2025-06-04 12:54:36,485 | INFO     | monitor loop #404: job 0:6678071204 is in state 'finished'
[2025-06-04 14:54:59] 2025-06-04 12:54:36,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:54:59] 2025-06-04 12:54:38,988 | INFO     | monitor loop #405: job 0:6678071204 is in state 'finished'
[2025-06-04 14:54:59] 2025-06-04 12:54:38,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:54:59] 2025-06-04 12:54:39,628 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:54:59] 2025-06-04 12:54:39,628 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678071204/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:54:59] 2025-06-04 12:54:39,628 | INFO     | extracted standard info from prmon json
[2025-06-04 14:54:59] 2025-06-04 12:54:39,628 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:54:59] 2025-06-04 12:54:39,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:54:59] 2025-06-04 12:54:39,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:54:59] 2025-06-04 12:54:39,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:54:59] 2025-06-04 12:54:39,629 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | sum of square deviations: 152858680.0
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | sum of deviations: -8435034494.000001
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | mean x: 1749039143.0
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | mean y: 2395643.1265822784
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | -- intersect: 96517722758.08794
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | intersect: 96517722758.08794
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | chi2: 0.16630252479398558
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | -- intersect: 96517722758.08794
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | current memory leak: -55.18 B/s (using 79 data points, chi2=0.17)
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | ..............................
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | . Timing measurements:
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | . get job = 0 s
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | . initial setup = 1 s
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | . payload setup = 5 s
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | . stage-in = 0 s
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | . payload execution = 5208 s
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | . stage-out = 0 s
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | . log creation = 0 s
[2025-06-04 14:54:59] 2025-06-04 12:54:39,630 | INFO     | ..............................
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | 
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | job summary report
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | --------------------------------------------------
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | PanDA job id: 6678071204
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | task id: 45006595
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | errors: (none)
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | pilot state: finished 
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | transexitcode: 0
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | exeerrorcode: 0
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | exeerrordiag: 
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | exitcode: 0
[2025-06-04 14:54:59] 2025-06-04 12:54:39,663 | INFO     | exitmsg: OK
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | cpuconsumptiontime: 15015 s
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | nevents: 400
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | neventsw: 0
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | pid: 786148
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | pgrp: 786148
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | corecount: 3
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | event service: False
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | sizes: {0: 2405016, 1: 2405215, 6: 2405421, 11: 2405449, 5218: 2431907, 5219: 2441038, 5230: 2441152}
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | --------------------------------------------------
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | 
[2025-06-04 14:54:59] 2025-06-04 12:54:39,664 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:54:59] 2025-06-04 12:54:39,677 | INFO     | job 6678071204 has completed (purged errors)
[2025-06-04 14:54:59] 2025-06-04 12:54:39,677 | INFO     | overall cleanup function is called
[2025-06-04 14:54:59] 2025-06-04 12:54:39,925 | INFO     | PID=779639 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 14:54:59] 2025-06-04 12:54:40,683 | INFO     | --- collectZombieJob: --- 10, [786148]
[2025-06-04 14:54:59] 2025-06-04 12:54:40,683 | INFO     | zombie collector waiting for pid 786148
[2025-06-04 14:54:59] 2025-06-04 12:54:40,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:54:59] 2025-06-04 12:54:40,684 | INFO     | collected zombie processes
[2025-06-04 14:54:59] 2025-06-04 12:54:40,684 | INFO     | will attempt to kill all subprocesses of pid=786148
[2025-06-04 14:54:59] 2025-06-04 12:54:40,735 | INFO     | process IDs to be killed: [786148] (in reverse order)
[2025-06-04 14:54:59] 2025-06-04 12:54:40,765 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:54:59] 2025-06-04 12:54:40,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:54:59] 2025-06-04 12:54:40,767 | INFO     | did not find any defunct processes belonging to 786148
[2025-06-04 14:54:59] 2025-06-04 12:54:40,768 | INFO     | did not find any defunct processes belonging to 786148
[2025-06-04 14:54:59] 2025-06-04 12:54:40,768 | INFO     | ready for new job
[2025-06-04 14:54:59] 2025-06-04 12:54:40,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:54:59] 2025-06-04 12:54:40,769 | INFO     | **************************************
[2025-06-04 14:54:59] 2025-06-04 12:54:40,769 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:54:59] 2025-06-04 12:54:40,769 | INFO     | **************************************
[2025-06-04 14:54:59] 2025-06-04 12:54:40,769 | INFO     | 
[2025-06-04 14:54:59] 2025-06-04 12:54:40,769 | INFO     | architecture information:
[2025-06-04 14:54:59] 2025-06-04 12:54:40,770 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:54:59] 2025-06-04 12:54:40,779 | INFO     | cat /etc/os-release:
[2025-06-04 14:54:59] NAME="CentOS Linux"
[2025-06-04 14:54:59] VERSION="7 (Core)"
[2025-06-04 14:54:59] ID="centos"
[2025-06-04 14:54:59] ID_LIKE="rhel fedora"
[2025-06-04 14:54:59] VERSION_ID="7"
[2025-06-04 14:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:54:59] ANSI_COLOR="0;31"
[2025-06-04 14:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:54:59] HOME_URL="https://www.centos.org/"
[2025-06-04 14:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:54:59] 
[2025-06-04 14:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:54:59] 
[2025-06-04 14:54:59] 2025-06-04 12:54:40,780 | INFO     | **************************************
[2025-06-04 14:54:59] 2025-06-04 12:54:41,283 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 14:54:59] 2025-06-04 12:54:41,297 | INFO     | sufficient remaining disk space (824224776192 B)
[2025-06-04 14:54:59] 2025-06-04 12:54:41,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:54:59] 2025-06-04 12:54:41,297 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:54:59] 2025-06-04 12:54:41,297 | INFO     | update_server=False
[2025-06-04 14:54:59] 2025-06-04 12:54:41,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:54:59] 2025-06-04 12:54:41,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:54:59] 2025-06-04 12:54:41,330 | INFO     | all job control threads have been joined
[2025-06-04 14:54:59] 2025-06-04 12:54:41,371 | INFO     | all data control threads have been joined
[2025-06-04 14:54:59] 2025-06-04 12:54:41,492 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 14:54:59] 2025-06-04 12:54:41,493 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 14:54:59] 2025-06-04 12:54:41,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:54:59] 2025-06-04 12:54:41,494 | INFO     | will abort loop
[2025-06-04 14:54:59] 2025-06-04 12:54:41,836 | INFO     | all payload control threads have been joined
[2025-06-04 14:54:59] 2025-06-04 12:54:41,931 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:54:59] 2025-06-04 12:54:41,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:54:59] 2025-06-04 12:54:41,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:54:59] 2025-06-04 12:54:41,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:54:59] 2025-06-04 12:54:42,303 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:42,304 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:42,326 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:42,336 | INFO     | [job] control thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:42,360 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:42,377 | INFO     | [data] control thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:42,385 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:42,500 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:42,634 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:42,841 | INFO     | [payload] control thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:43,091 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:43,565 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:43,774 | INFO     | [job] validate thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:43,978 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:44,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:54:59] 2025-06-04 12:54:48,351 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:52,078 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:54:59] 2025-06-04 12:54:53,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:54:59] 2025-06-04 12:54:53,262 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573861586752)>', '<ExcThread(monitor, started 140572987741952)>']
[2025-06-04 14:54:59] 2025-06-04 12:54:53,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:54:59] 2025-06-04 12:54:53,995 | INFO     | [monitor] control thread has ended
[2025-06-04 14:54:59] 2025-06-04 12:54:58,283 | INFO     | all workflow threads have been joined
[2025-06-04 14:54:59] 2025-06-04 12:54:58,284 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:54:59] 2025-06-04 12:54:58,284 | INFO     | traces error code: 0
[2025-06-04 14:54:59] 2025-06-04 12:54:58,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:54:59] 2025-06-04 12:54:58,335 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:54:59] 2025-06-04 12:54:58,338 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:54:59] 2025-06-04 12:54:58,341 [wrapper] pilotpid: 779639
[2025-06-04 14:54:59] 2025-06-04 12:54:58,344 [wrapper] Pilot exit status: 0
[2025-06-04 14:54:59] 2025-06-04 12:54:58,352 [wrapper] pandaids: 6678071204
[2025-06-04 14:54:59] 2025-06-04 12:54:58,370 [wrapper] cleanup supervisor_pilot  803731 779640
[2025-06-04 14:54:59] 2025-06-04 12:54:58,373 [wrapper] Test setup, not cleaning
[2025-06-04 14:54:59] 2025-06-04 12:54:58,375 [wrapper] apfmon messages muted
[2025-06-04 14:54:59] 2025-06-04 12:54:58,378 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:54:59] 2025-06-04 12:54:58,380 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:54:59]  *** Error codes and diagnostics ***
[2025-06-04 14:54:59]     "exeErrorCode": 0,
[2025-06-04 14:54:59]     "exeErrorDiag": "",
[2025-06-04 14:54:59]     "pilotErrorCode": 0,
[2025-06-04 14:54:59]     "pilotErrorDiag": "",
[2025-06-04 14:54:59]  *** Listing of results directory ***
[2025-06-04 14:54:59] total 391824
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:36 pilot3.tar.gz
[2025-06-04 14:54:59] -rwx------ 1 boinc boinc     37140 Jun  3 22:39 runpilot2-wrapper.sh
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:40 queuedata.json
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:54:59] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:27 run_atlas
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:27 job.xml
[2025-06-04 14:54:59] -rw-r--r-- 2 boinc boinc 218264142 Jun  4 13:27 EVNT.45006593._001808.pool.root.1
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc      6679 Jun  4 13:27 init_data.xml
[2025-06-04 14:54:59] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:27 shared
[2025-06-04 14:54:59] -rw-r--r-- 2 boinc boinc    508880 Jun  4 13:27 input.tar.gz
[2025-06-04 14:54:59] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:27 start_atlas.sh
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:27 boinc_lockfile
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc      2525 Jun  4 13:27 pandaJob.out
[2025-06-04 14:54:59] -rw------- 1 boinc boinc    986812 Jun  4 13:27 agis_schedconf.cvmfs.json
[2025-06-04 14:54:59] -rw------- 1 boinc boinc   1603667 Jun  4 13:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:54:59] drwx------ 4 boinc boinc      4096 Jun  4 13:27 pilot3
[2025-06-04 14:54:59] -rw------- 1 boinc boinc        95 Jun  4 14:53 pilot_heartbeat.json
[2025-06-04 14:54:59] -rw------- 1 boinc boinc 177664737 Jun  4 14:54 HITS.45006595._045066.pool.root.1
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc       529 Jun  4 14:54 boinc_task_state.xml
[2025-06-04 14:54:59] -rw------- 1 boinc boinc      1021 Jun  4 14:54 memory_monitor_summary.json
[2025-06-04 14:54:59] -rw------- 1 boinc boinc    224409 Jun  4 14:54 log.45006595._045066.job.log.tgz.1
[2025-06-04 14:54:59] -rw------- 1 boinc boinc      7650 Jun  4 14:54 heartbeat.json
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc        27 Jun  4 14:54 wrapper_checkpoint.txt
[2025-06-04 14:54:59] -rw------- 1 boinc boinc      4615 Jun  4 14:54 pilotlog.txt
[2025-06-04 14:54:59] -rw------- 1 boinc boinc    504221 Jun  4 14:54 log.45006595._045066.job.log.1
[2025-06-04 14:54:59] -rw------- 1 boinc boinc       357 Jun  4 14:54 output.list
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc       620 Jun  4 14:54 runtime_log
[2025-06-04 14:54:59] -rw------- 1 boinc boinc    747520 Jun  4 14:54 result.tar.gz
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc      8192 Jun  4 14:54 boinc_mmap_file
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc      8733 Jun  4 14:54 runtime_log.err
[2025-06-04 14:54:59] -rw------- 1 boinc boinc       659 Jun  4 14:54 axIKDmPbng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmL5lKDmhu48Oo.diag
[2025-06-04 14:54:59] -rw-r--r-- 1 boinc boinc     21861 Jun  4 14:54 stderr.txt
[2025-06-04 14:54:59] HITS file was successfully produced:
[2025-06-04 14:54:59] -rw------- 1 boinc boinc 177664737 Jun  4 14:54 shared/HITS.pool.root.1
[2025-06-04 14:54:59]  *** Contents of shared directory: ***
[2025-06-04 14:54:59] total 387912
[2025-06-04 14:54:59] -rw-r--r-- 2 boinc boinc 218264142 Jun  4 13:27 ATLAS.root_0
[2025-06-04 14:54:59] -rw-r--r-- 2 boinc boinc    508880 Jun  4 13:27 input.tar.gz
[2025-06-04 14:54:59] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:27 start_atlas.sh
[2025-06-04 14:54:59] -rw------- 1 boinc boinc 177664737 Jun  4 14:54 HITS.pool.root.1
[2025-06-04 14:54:59] -rw------- 1 boinc boinc    747520 Jun  4 14:54 result.tar.gz
14:55:20 (775989): run_atlas exited; CPU time 15053.763522
14:55:20 (775989): called boinc_finish(0)

</stderr_txt>
]]>

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