Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:27:15 (894604): wrapper (7.7.26015): starting
11:27:15 (894604): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 11:27:15] Arguments: --nthreads 3
[2025-06-04 11:27:15] Threads: 3
[2025-06-04 11:27:15] Checking for CVMFS
[2025-06-04 11:27:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:27:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:27:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:27:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:27:15] 2.9.2.0 532491 1044 76040 146775 1 55 31035971 36864000 0 130560 0 939091 99.992 302890 44614 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 11:27:15] CVMFS is ok
[2025-06-04 11:27:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:27:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:27:15] Further information can be found at the LHC@home message board.
[2025-06-04 11:27:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:27:15] Checking for apptainer binary...
[2025-06-04 11:27:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:27:15] Running /usr/bin/apptainer --version
[2025-06-04 11:27:15] apptainer version 1.3.6-6.1
[2025-06-04 11:27:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:27:15] atlasA228b
[2025-06-04 11:27:15] apptainer works
[2025-06-04 11:27:15] Set ATHENA_PROC_NUMBER=3
[2025-06-04 11:27:15] Set ATHENA_CORE_NUMBER=3
[2025-06-04 11:27:15] Starting ATLAS job with PandaID=6678071428
[2025-06-04 11:27:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:38:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:38:44]  guid=1a54049b-a7f7-427e-87a8-ea2a04e5df32
[2025-06-04 12:38:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:38:44]  is_altstaged=None
[2025-06-04 12:38:44]  is_tar=False
[2025-06-04 12:38:44]  lfn=log.45006595._045197.job.log.tgz.1
[2025-06-04 12:38:44]  mtime=0
[2025-06-04 12:38:44]  protocol_id=None
[2025-06-04 12:38:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:38:44]  replicas=None
[2025-06-04 12:38:44]  scope=mc23_13p6TeV
[2025-06-04 12:38:44]  status=None
[2025-06-04 12:38:44]  status_code=0
[2025-06-04 12:38:44]  storage_token=
[2025-06-04 12:38:44]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678071428/log.45006595._045197.job.log.tgz.1
[2025-06-04 12:38:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/7c/log.45006595._045197.job.log.tgz.1
[2025-06-04 12:38:44]  workdir=None
[2025-06-04 12:38:44] ]
[2025-06-04 12:38:44] 2025-06-04 10:38:26,878 | INFO     | transferring file log.45006595._045197.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678071428/log.45006595._045197.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 12:38:44] 2025-06-04 10:38:26,878 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678071428/log.45006595._045197.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0451
[2025-06-04 12:38:44] 2025-06-04 10:38:26,891 | INFO     | adding to output.list: log.45006595._045197.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/7c/log.45006595._045197.job.log.tg
[2025-06-04 12:38:44] 2025-06-04 10:38:26,892 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:38:44] 2025-06-04 10:38:26,892 | INFO     | summary of transferred files:
[2025-06-04 12:38:44] 2025-06-04 10:38:26,892 | INFO     |  -- lfn=log.45006595._045197.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:38:44] 2025-06-04 10:38:26,892 | INFO     | stage-out finished correctly
[2025-06-04 12:38:44] 2025-06-04 10:38:27,265 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:38:44] 2025-06-04 10:38:28,301 | INFO     | monitor loop #329: job 0:6678071428 is in state 'finished'
[2025-06-04 12:38:44] 2025-06-04 10:38:28,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:38:44] 2025-06-04 10:38:28,776 | INFO     | job 6678071428 has state=finished
[2025-06-04 12:38:44] 2025-06-04 10:38:28,777 | INFO     | preparing for final server update for job 6678071428 in state='finished'
[2025-06-04 12:38:44] 2025-06-04 10:38:28,777 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:38:44] 2025-06-04 10:38:28,777 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:38:44] 2025-06-04 10:38:28,777 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:38:44] 2025-06-04 10:38:28,777 | INFO     | job 6678071428 has finished - writing final server update
[2025-06-04 12:38:44] 2025-06-04 10:38:28,777 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:38:44] 2025-06-04 10:38:28,778 | INFO     | executing command: lscpu
[2025-06-04 12:38:44] 2025-06-04 10:38:28,793 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:38:44] 2025-06-04 10:38:29,082 | INFO     | PID=898339 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 12:38:44] 2025-06-04 10:38:30,803 | INFO     | monitor loop #330: job 0:6678071428 is in state 'finished'
[2025-06-04 12:38:44] 2025-06-04 10:38:30,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:38:44] 2025-06-04 10:38:31,207 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:38:44] 2025-06-04 10:38:31,207 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678071428/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:38:44] 2025-06-04 10:38:31,207 | INFO     | extracted standard info from prmon json
[2025-06-04 12:38:44] 2025-06-04 10:38:31,207 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:38:44] 2025-06-04 10:38:31,207 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:38:44] 2025-06-04 10:38:31,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:38:44] 2025-06-04 10:38:31,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | sum of square deviations: 77515872.0
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | sum of deviations: -6075365089.0
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | mean x: 1749031457.0
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | mean y: 2579214.301587302
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | -- intersect: 137084242353.18242
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | intersect: 137084242353.18242
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | chi2: 0.039224403837801125
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | -- intersect: 137084242353.18242
[2025-06-04 12:38:44] 2025-06-04 10:38:31,208 | INFO     | current memory leak: -78.38 B/s (using 63 data points, chi2=0.04)
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | ..............................
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | . Timing measurements:
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | . get job = 0 s
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | . initial setup = 1 s
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | . payload setup = 3 s
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | . stage-in = 0 s
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | . payload execution = 4244 s
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | . stage-out = 0 s
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | . log creation = 0 s
[2025-06-04 12:38:44] 2025-06-04 10:38:31,209 | INFO     | ..............................
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | 
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | job summary report
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | --------------------------------------------------
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | PanDA job id: 6678071428
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | task id: 45006595
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | errors: (none)
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | pilot state: finished 
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | transexitcode: 0
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | exeerrorcode: 0
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | exeerrordiag: 
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | exitcode: 0
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | exitmsg: OK
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | cpuconsumptiontime: 12101 s
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | nevents: 400
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | neventsw: 0
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | pid: 904853
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | pgrp: 904853
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | corecount: 3
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | event service: False
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | sizes: {0: 2405187, 2: 2405393, 10: 2405421, 4251: 2431471, 4253: 2440502, 4257: 2440616}
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | --------------------------------------------------
[2025-06-04 12:38:44] 2025-06-04 10:38:31,443 | INFO     | 
[2025-06-04 12:38:44] 2025-06-04 10:38:31,444 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | job 6678071428 has completed (purged errors)
[2025-06-04 12:38:44] 2025-06-04 10:38:31,457 | INFO     | overall cleanup function is called
[2025-06-04 12:38:44] 2025-06-04 10:38:32,463 | INFO     | --- collectZombieJob: --- 10, [904853]
[2025-06-04 12:38:44] 2025-06-04 10:38:32,463 | INFO     | zombie collector waiting for pid 904853
[2025-06-04 12:38:44] 2025-06-04 10:38:32,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:38:44] 2025-06-04 10:38:32,463 | INFO     | collected zombie processes
[2025-06-04 12:38:44] 2025-06-04 10:38:32,463 | INFO     | will attempt to kill all subprocesses of pid=904853
[2025-06-04 12:38:44] 2025-06-04 10:38:32,508 | INFO     | process IDs to be killed: [904853] (in reverse order)
[2025-06-04 12:38:44] 2025-06-04 10:38:32,535 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:38:44] 2025-06-04 10:38:32,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:38:44] 2025-06-04 10:38:32,536 | INFO     | did not find any defunct processes belonging to 904853
[2025-06-04 12:38:44] 2025-06-04 10:38:32,537 | INFO     | did not find any defunct processes belonging to 904853
[2025-06-04 12:38:44] 2025-06-04 10:38:32,537 | INFO     | ready for new job
[2025-06-04 12:38:44] 2025-06-04 10:38:32,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:38:44] 2025-06-04 10:38:32,538 | INFO     | **************************************
[2025-06-04 12:38:44] 2025-06-04 10:38:32,538 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:38:44] 2025-06-04 10:38:32,538 | INFO     | **************************************
[2025-06-04 12:38:44] 2025-06-04 10:38:32,538 | INFO     | 
[2025-06-04 12:38:44] 2025-06-04 10:38:32,539 | INFO     | architecture information:
[2025-06-04 12:38:44] 2025-06-04 10:38:32,539 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:38:44] 2025-06-04 10:38:32,548 | INFO     | cat /etc/os-release:
[2025-06-04 12:38:44] NAME="CentOS Linux"
[2025-06-04 12:38:44] VERSION="7 (Core)"
[2025-06-04 12:38:44] ID="centos"
[2025-06-04 12:38:44] ID_LIKE="rhel fedora"
[2025-06-04 12:38:44] VERSION_ID="7"
[2025-06-04 12:38:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:38:44] ANSI_COLOR="0;31"
[2025-06-04 12:38:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:38:44] HOME_URL="https://www.centos.org/"
[2025-06-04 12:38:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:38:44] 
[2025-06-04 12:38:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:38:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:38:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:38:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:38:44] 
[2025-06-04 12:38:44] 2025-06-04 10:38:32,548 | INFO     | **************************************
[2025-06-04 12:38:44] 2025-06-04 10:38:33,051 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 12:38:44] 2025-06-04 10:38:33,063 | INFO     | sufficient remaining disk space (268974424064 B)
[2025-06-04 12:38:44] 2025-06-04 10:38:33,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:38:44] 2025-06-04 10:38:33,063 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:38:44] 2025-06-04 10:38:33,063 | INFO     | update_server=False
[2025-06-04 12:38:44] 2025-06-04 10:38:33,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:38:44] 2025-06-04 10:38:33,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:38:44] 2025-06-04 10:38:33,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:38:44] 2025-06-04 10:38:33,093 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:38:44] 2025-06-04 10:38:33,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:38:44] 2025-06-04 10:38:33,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:38:44] 2025-06-04 10:38:33,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:38:44] 2025-06-04 10:38:33,306 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 12:38:44] 2025-06-04 10:38:33,306 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 12:38:44] 2025-06-04 10:38:33,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:38:44] 2025-06-04 10:38:33,306 | INFO     | will abort loop
[2025-06-04 12:38:44] 2025-06-04 10:38:33,580 | INFO     | all data control threads have been joined
[2025-06-04 12:38:44] 2025-06-04 10:38:33,885 | INFO     | all payload control threads have been joined
[2025-06-04 12:38:44] 2025-06-04 10:38:34,068 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:34,069 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:34,114 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:34,311 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:34,427 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:34,434 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:34,554 | INFO     | all job control threads have been joined
[2025-06-04 12:38:44] 2025-06-04 10:38:34,586 | INFO     | [data] control thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:34,890 | INFO     | [payload] control thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:35,069 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:35,146 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:35,400 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:35,433 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:35,446 | INFO     | [job] validate thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:35,553 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:35,559 | INFO     | [job] control thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:37,305 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:38:44] 2025-06-04 10:38:39,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519196104512)>', '<ExcThread(monitor, started 140518025582336)>']
[2025-06-04 12:38:44] 2025-06-04 10:38:40,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:38:44] 2025-06-04 10:38:40,127 | INFO     | [monitor] control thread has ended
[2025-06-04 12:38:44] 2025-06-04 10:38:44,344 | INFO     | all workflow threads have been joined
[2025-06-04 12:38:44] 2025-06-04 10:38:44,344 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:38:44] 2025-06-04 10:38:44,344 | INFO     | traces error code: 0
[2025-06-04 12:38:44] 2025-06-04 10:38:44,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:38:44] 2025-06-04 10:38:44,392 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:38:44] 2025-06-04 10:38:44,395 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:38:44] 2025-06-04 10:38:44,398 [wrapper] pilotpid: 898339
[2025-06-04 12:38:44] 2025-06-04 10:38:44,400 [wrapper] Pilot exit status: 0
[2025-06-04 12:38:44] 2025-06-04 10:38:44,408 [wrapper] pandaids: 6678071428
[2025-06-04 12:38:44] 2025-06-04 10:38:44,426 [wrapper] cleanup supervisor_pilot  924293 898340
[2025-06-04 12:38:44] 2025-06-04 10:38:44,429 [wrapper] Test setup, not cleaning
[2025-06-04 12:38:44] 2025-06-04 10:38:44,431 [wrapper] apfmon messages muted
[2025-06-04 12:38:44] 2025-06-04 10:38:44,434 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:38:44] 2025-06-04 10:38:44,436 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:38:44]  *** Error codes and diagnostics ***
[2025-06-04 12:38:44]     "exeErrorCode": 0,
[2025-06-04 12:38:44]     "exeErrorDiag": "",
[2025-06-04 12:38:44]     "pilotErrorCode": 0,
[2025-06-04 12:38:44]     "pilotErrorDiag": "",
[2025-06-04 12:38:44]  *** Listing of results directory ***
[2025-06-04 12:38:44] total 382876
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:36 pilot3.tar.gz
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:46 queuedata.json
[2025-06-04 12:38:44] -rwx------ 1 boinc boinc     37140 Jun  3 22:46 runpilot2-wrapper.sh
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:38:44] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:27 run_atlas
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:27 job.xml
[2025-06-04 12:38:44] -rw-r--r-- 2 boinc boinc 214068568 Jun  4 11:27 EVNT.45006593._001813.pool.root.1
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc      6932 Jun  4 11:27 init_data.xml
[2025-06-04 12:38:44] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:27 shared
[2025-06-04 12:38:44] -rw-r--r-- 2 boinc boinc    508880 Jun  4 11:27 input.tar.gz
[2025-06-04 12:38:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:27 start_atlas.sh
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:27 boinc_lockfile
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc      2525 Jun  4 11:27 pandaJob.out
[2025-06-04 12:38:44] -rw------- 1 boinc boinc    986766 Jun  4 11:27 agis_schedconf.cvmfs.json
[2025-06-04 12:38:44] -rw------- 1 boinc boinc   1603667 Jun  4 11:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:38:44] drwx------ 4 boinc boinc      4096 Jun  4 11:27 pilot3
[2025-06-04 12:38:44] -rw------- 1 boinc boinc        95 Jun  4 12:37 pilot_heartbeat.json
[2025-06-04 12:38:44] -rw------- 1 boinc boinc 172864908 Jun  4 12:38 HITS.45006595._045197.pool.root.1
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:38 boinc_task_state.xml
[2025-06-04 12:38:44] -rw------- 1 boinc boinc      1016 Jun  4 12:38 memory_monitor_summary.json
[2025-06-04 12:38:44] -rw------- 1 boinc boinc    223929 Jun  4 12:38 log.45006595._045197.job.log.tgz.1
[2025-06-04 12:38:44] -rw------- 1 boinc boinc      7652 Jun  4 12:38 heartbeat.json
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:38 boinc_mmap_file
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:38 wrapper_checkpoint.txt
[2025-06-04 12:38:44] -rw------- 1 boinc boinc      4543 Jun  4 12:38 pilotlog.txt
[2025-06-04 12:38:44] -rw------- 1 boinc boinc    421933 Jun  4 12:38 log.45006595._045197.job.log.1
[2025-06-04 12:38:44] -rw------- 1 boinc boinc       357 Jun  4 12:38 output.list
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:38 runtime_log
[2025-06-04 12:38:44] -rw------- 1 boinc boinc    665600 Jun  4 12:38 result.tar.gz
[2025-06-04 12:38:44] -rw------- 1 boinc boinc       662 Jun  4 12:38 zYVMDmvhng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv6lKDmMzDzHo.diag
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc      8753 Jun  4 12:38 runtime_log.err
[2025-06-04 12:38:44] -rw-r--r-- 1 boinc boinc     21341 Jun  4 12:38 stderr.txt
[2025-06-04 12:38:44] HITS file was successfully produced:
[2025-06-04 12:38:44] -rw------- 1 boinc boinc 172864908 Jun  4 12:38 shared/HITS.pool.root.1
[2025-06-04 12:38:44]  *** Contents of shared directory: ***
[2025-06-04 12:38:44] total 379044
[2025-06-04 12:38:44] -rw-r--r-- 2 boinc boinc 214068568 Jun  4 11:27 ATLAS.root_0
[2025-06-04 12:38:44] -rw-r--r-- 2 boinc boinc    508880 Jun  4 11:27 input.tar.gz
[2025-06-04 12:38:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:27 start_atlas.sh
[2025-06-04 12:38:44] -rw------- 1 boinc boinc 172864908 Jun  4 12:38 HITS.pool.root.1
[2025-06-04 12:38:44] -rw------- 1 boinc boinc    665600 Jun  4 12:38 result.tar.gz
12:38:45 (894604): run_atlas exited; CPU time 12113.968650
12:38:45 (894604): called boinc_finish(0)

</stderr_txt>
]]>

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