Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:04:10 (22716): wrapper (7.7.26015): starting
11:04:10 (22716): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:04:10] Arguments: --nthreads 8
[2025-06-04 11:04:10] Threads: 8
[2025-06-04 11:04:10] Checking for CVMFS
[2025-06-04 11:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:04:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:04:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:04:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:04:12] 2.11.2.0 3740 33150 96540 146773 0 60 20045459 25165824 3522 130560 0 18143420 99.814 19037431 2211 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 11:04:12] CVMFS is ok
[2025-06-04 11:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:04:12] Checking for apptainer binary...
[2025-06-04 11:04:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:04:12] Running /usr/bin/apptainer --version
[2025-06-04 11:04:12] apptainer version 1.3.2-1.el7
[2025-06-04 11:04:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:04:22] cg-vwn234.simple-grid.lan
[2025-06-04 11:04:22] apptainer works
[2025-06-04 11:04:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:04:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:04:22] Starting ATLAS job with PandaID=6678071417
[2025-06-04 11:04:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:10:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:10:21] 2025-06-04 12:57:24,060 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:10:21] 2025-06-04 12:57:24,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:10:21] 2025-06-04 12:57:24,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:10:21] 2025-06-04 12:57:24,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:10:21] 2025-06-04 12:57:24,066 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:10:21] 2025-06-04 12:57:24,066 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,068 | INFO     | sum of deviations: 62304750807.5
[2025-06-04 15:10:21] 2025-06-04 12:57:24,068 | INFO     | mean x: 1749035128.5
[2025-06-04 15:10:21] 2025-06-04 12:57:24,069 | INFO     | mean y: 2446964.7453703703
[2025-06-04 15:10:21] 2025-06-04 12:57:24,069 | INFO     | -- intersect: -34870554387.53542
[2025-06-04 15:10:21] 2025-06-04 12:57:24,069 | INFO     | intersect: -34870554387.53542
[2025-06-04 15:10:21] 2025-06-04 12:57:24,069 | INFO     | chi2: 7.970476572895099
[2025-06-04 15:10:21] 2025-06-04 12:57:24,070 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,072 | INFO     | sum of deviations: 75899886290.9999
[2025-06-04 15:10:21] 2025-06-04 12:57:24,072 | INFO     | mean x: 1749034976.0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,072 | INFO     | mean y: 2456544.8388625593
[2025-06-04 15:10:21] 2025-06-04 12:57:24,072 | INFO     | -- intersect: -45572218906.03959
[2025-06-04 15:10:21] 2025-06-04 12:57:24,072 | INFO     | intersect: -45572218906.03959
[2025-06-04 15:10:21] 2025-06-04 12:57:24,073 | INFO     | chi2: 7.23101311218693
[2025-06-04 15:10:21] 2025-06-04 12:57:24,073 | INFO     | current chi2=7.23101311218693 (change=9.277531323821147 %)
[2025-06-04 15:10:21] 2025-06-04 12:57:24,073 | INFO     | right removable region: 210
[2025-06-04 15:10:21] 2025-06-04 12:57:24,073 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,075 | INFO     | sum of deviations: -13304211568.99999
[2025-06-04 15:10:21] 2025-06-04 12:57:24,075 | INFO     | mean x: 1749035281.0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,075 | INFO     | mean y: 2501308.18957346
[2025-06-04 15:10:21] 2025-06-04 12:57:24,075 | INFO     | -- intersect: 7991119733.731954
[2025-06-04 15:10:21] 2025-06-04 12:57:24,076 | INFO     | intersect: 7991119733.731954
[2025-06-04 15:10:21] 2025-06-04 12:57:24,076 | INFO     | chi2: 2.904889826815723
[2025-06-04 15:10:21] 2025-06-04 12:57:24,076 | INFO     | current chi2=2.904889826815723 (change=63.55437720381397 %)
[2025-06-04 15:10:21] 2025-06-04 12:57:24,076 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 15:10:21] 2025-06-04 12:57:24,084 | INFO     | sum of deviations: -57240480360.50001
[2025-06-04 15:10:21] 2025-06-04 12:57:24,085 | INFO     | mean x: 1749035433.5
[2025-06-04 15:10:21] 2025-06-04 12:57:24,085 | INFO     | mean y: 2534265.014563107
[2025-06-04 15:10:21] 2025-06-04 12:57:24,085 | INFO     | -- intersect: 36937017475.26671
[2025-06-04 15:10:21] 2025-06-04 12:57:24,085 | INFO     | intersect: 36937017475.26671
[2025-06-04 15:10:21] 2025-06-04 12:57:24,086 | INFO     | chi2: 1.0206065432302436
[2025-06-04 15:10:21] 2025-06-04 12:57:24,086 | INFO     | current chi2=1.0206065432302436 (change=64.86591216614194 %)
[2025-06-04 15:10:21] 2025-06-04 12:57:24,086 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,088 | INFO     | sum of deviations: -61181787930.00001
[2025-06-04 15:10:21] 2025-06-04 12:57:24,088 | INFO     | mean x: 1749035586.0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,088 | INFO     | mean y: 2537326.965174129
[2025-06-04 15:10:21] 2025-06-04 12:57:24,088 | INFO     | -- intersect: 42500192035.58987
[2025-06-04 15:10:21] 2025-06-04 12:57:24,088 | INFO     | intersect: 42500192035.58987
[2025-06-04 15:10:21] 2025-06-04 12:57:24,089 | INFO     | chi2: 0.9563227784176898
[2025-06-04 15:10:21] 2025-06-04 12:57:24,089 | INFO     | current chi2=0.9563227784176898 (change=6.298584428931271 %)
[2025-06-04 15:10:21] 2025-06-04 12:57:24,089 | INFO     | left removable region: 30
[2025-06-04 15:10:21] 2025-06-04 12:57:24,089 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,091 | INFO     | sum of deviations: -34962573767.0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,091 | INFO     | mean x: 1749035860.5
[2025-06-04 15:10:21] 2025-06-04 12:57:24,091 | INFO     | mean y: 2540370.8666666667
[2025-06-04 15:10:21] 2025-06-04 12:57:24,091 | INFO     | -- intersect: 33818333241.68144
[2025-06-04 15:10:21] 2025-06-04 12:57:24,091 | INFO     | intersect: 33818333241.68144
[2025-06-04 15:10:21] 2025-06-04 12:57:24,092 | INFO     | chi2: 0.10779546505019208
[2025-06-04 15:10:21] 2025-06-04 12:57:24,092 | INFO     | -- intersect: 33818333241.68144
[2025-06-04 15:10:21] 2025-06-04 12:57:24,092 | INFO     | current memory leak: -19.33 B/s (using 180 data points, chi2=0.11)
[2025-06-04 15:10:21] 2025-06-04 12:57:24,093 | INFO     | ..............................
[2025-06-04 15:10:21] 2025-06-04 12:57:24,093 | INFO     | . Timing measurements:
[2025-06-04 15:10:21] 2025-06-04 12:57:24,093 | INFO     | . get job = 0 s
[2025-06-04 15:10:21] 2025-06-04 12:57:24,093 | INFO     | . initial setup = 12 s
[2025-06-04 15:10:21] 2025-06-04 12:57:24,093 | INFO     | . payload setup = 166 s
[2025-06-04 15:10:21] 2025-06-04 12:57:24,093 | INFO     | . stage-in = 0 s
[2025-06-04 15:10:21] 2025-06-04 12:57:24,093 | INFO     | . payload execution = 13316 s
[2025-06-04 15:10:21] 2025-06-04 12:57:24,094 | INFO     | . stage-out = 3 s
[2025-06-04 15:10:21] 2025-06-04 12:57:24,094 | INFO     | . log creation = 1 s
[2025-06-04 15:10:21] 2025-06-04 12:57:24,094 | INFO     | ..............................
[2025-06-04 15:10:21] 2025-06-04 12:57:24,520 | INFO     | 
[2025-06-04 15:10:21] 2025-06-04 12:57:24,520 | INFO     | job summary report
[2025-06-04 15:10:21] 2025-06-04 12:57:24,520 | INFO     | --------------------------------------------------
[2025-06-04 15:10:21] 2025-06-04 12:57:24,520 | INFO     | PanDA job id: 6678071417
[2025-06-04 15:10:21] 2025-06-04 12:57:24,520 | INFO     | task id: 45006595
[2025-06-04 15:10:21] 2025-06-04 12:57:24,520 | INFO     | errors: (none)
[2025-06-04 15:10:21] 2025-06-04 12:57:24,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | pilot state: finished 
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | transexitcode: 0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | exeerrorcode: 0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | exeerrordiag: 
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | exitcode: 0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | exitmsg: OK
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | cpuconsumptiontime: 49304 s
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | nevents: 400
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | neventsw: 0
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | pid: 2588
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | pgrp: 2588
[2025-06-04 15:10:21] 2025-06-04 12:57:24,521 | INFO     | corecount: 8
[2025-06-04 15:10:21] 2025-06-04 12:57:24,522 | INFO     | event service: False
[2025-06-04 15:10:21] 2025-06-04 12:57:24,522 | INFO     | sizes: {0: 2404956, 1: 2405040, 2: 2405239, 12: 2405239, 23: 2405267, 34: 2405295, 45: 2405451, 55: 2405479, 66: 2405507, 77: 2405535, 88: 2406105, 99: 2406105, 13
[2025-06-04 15:10:21] 2025-06-04 12:57:24,522 | INFO     | --------------------------------------------------
[2025-06-04 15:10:21] 2025-06-04 12:57:24,522 | INFO     | 
[2025-06-04 15:10:21] 2025-06-04 12:57:24,522 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-04 15:10:21] 2025-06-04 12:57:24,540 | INFO     | PID=28075 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 15:10:21] 2025-06-04 12:57:24,540 | INFO     | .. there are 9 such processes running
[2025-06-04 15:10:21] 2025-06-04 12:57:24,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,877 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:10:21] 2025-06-04 12:57:24,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,877 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:10:21] 2025-06-04 12:57:24,877 | INFO     | job 6678071417 has completed (purged errors)
[2025-06-04 15:10:21] 2025-06-04 12:57:24,878 | INFO     | overall cleanup function is called
[2025-06-04 15:10:21] 2025-06-04 12:57:25,886 | INFO     | --- collectZombieJob: --- 10, [2588]
[2025-06-04 15:10:21] 2025-06-04 12:57:25,886 | INFO     | zombie collector waiting for pid 2588
[2025-06-04 15:10:21] 2025-06-04 12:57:25,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:10:21] 2025-06-04 12:57:25,886 | INFO     | collected zombie processes
[2025-06-04 15:10:21] 2025-06-04 12:57:25,886 | INFO     | will attempt to kill all subprocesses of pid=2588
[2025-06-04 15:10:21] 2025-06-04 12:57:26,052 | INFO     | process IDs to be killed: [2588] (in reverse order)
[2025-06-04 15:10:21] 2025-06-04 12:57:26,635 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:10:21] 2025-06-04 12:57:26,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:10:21] 2025-06-04 12:57:26,639 | INFO     | did not find any defunct processes belonging to 2588
[2025-06-04 15:10:21] 2025-06-04 12:57:26,642 | INFO     | did not find any defunct processes belonging to 2588
[2025-06-04 15:10:21] 2025-06-04 12:57:26,643 | INFO     | ready for new job
[2025-06-04 15:10:21] 2025-06-04 12:57:26,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:10:21] 2025-06-04 12:57:26,645 | INFO     | **************************************
[2025-06-04 15:10:21] 2025-06-04 12:57:26,645 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:10:21] 2025-06-04 12:57:26,645 | INFO     | **************************************
[2025-06-04 15:10:21] 2025-06-04 12:57:26,645 | INFO     | 
[2025-06-04 15:10:21] 2025-06-04 12:57:26,646 | INFO     | pilot is running in a VM
[2025-06-04 15:10:21] 2025-06-04 12:57:26,646 | INFO     | architecture information:
[2025-06-04 15:10:21] 2025-06-04 12:57:26,661 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:10:21] 2025-06-04 12:57:26,866 | INFO     | cat /etc/os-release:
[2025-06-04 15:10:21] NAME="CentOS Linux"
[2025-06-04 15:10:21] VERSION="7 (Core)"
[2025-06-04 15:10:21] ID="centos"
[2025-06-04 15:10:21] ID_LIKE="rhel fedora"
[2025-06-04 15:10:21] VERSION_ID="7"
[2025-06-04 15:10:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:10:21] ANSI_COLOR="0;31"
[2025-06-04 15:10:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:10:21] HOME_URL="https://www.centos.org/"
[2025-06-04 15:10:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:10:21] 
[2025-06-04 15:10:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:10:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:10:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:10:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:10:21] 
[2025-06-04 15:10:21] 2025-06-04 12:57:26,867 | INFO     | **************************************
[2025-06-04 15:10:21] 2025-06-04 12:57:27,370 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-04 15:10:21] 2025-06-04 12:57:27,668 | INFO     | sufficient remaining disk space (496805871616 B)
[2025-06-04 15:10:21] 2025-06-04 12:57:27,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:10:21] 2025-06-04 12:57:27,669 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:10:21] 2025-06-04 12:57:27,669 | INFO     | update_server=False
[2025-06-04 15:10:21] 2025-06-04 12:57:27,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:10:21] 2025-06-04 12:57:27,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:10:21] 2025-06-04 12:57:28,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:10:21] 2025-06-04 12:57:28,016 | INFO     | aborting loop
[2025-06-04 15:10:21] 2025-06-04 12:57:28,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:10:21] 2025-06-04 12:57:28,487 | INFO     | all payload control threads have been joined
[2025-06-04 15:10:21] 2025-06-04 12:57:28,499 | INFO     | all data control threads have been joined
[2025-06-04 15:10:21] 2025-06-04 12:57:28,558 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:10:21] 2025-06-04 12:57:28,558 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:10:21] 2025-06-04 12:57:28,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:10:21] 2025-06-04 12:57:28,676 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:28,913 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:28,956 | INFO     | all job control threads have been joined
[2025-06-04 15:10:21] 2025-06-04 12:57:29,012 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:29,022 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:29,309 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:10:21] 2025-06-04 12:57:29,404 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:29,493 | INFO     | [payload] control thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:29,505 | INFO     | [data] control thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:29,531 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:29,681 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:29,715 | INFO     | [job] validate thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:29,756 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:29,962 | INFO     | [job] control thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:30,238 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:30,238 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:30,315 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:32,060 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:10:21] 2025-06-04 12:57:33,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766640461632)>', '<ExcThread(monitor, started 139766196586240)>']
[2025-06-04 15:10:21] 2025-06-04 12:57:33,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:10:21] 2025-06-04 12:57:33,588 | INFO     | [monitor] control thread has ended
[2025-06-04 15:10:21] 2025-06-04 12:57:38,130 | INFO     | all workflow threads have been joined
[2025-06-04 15:10:21] 2025-06-04 12:57:38,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:10:21] 2025-06-04 12:57:38,130 | INFO     | traces error code: 0
[2025-06-04 15:10:21] 2025-06-04 12:57:38,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:10:21] 2025-06-04 12:57:38,507 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:10:21] 2025-06-04 12:57:38,580 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:10:21] 2025-06-04 12:57:38,641 [wrapper] pilotpid: 28075
[2025-06-04 15:10:21] 2025-06-04 12:57:38,732 [wrapper] Pilot exit status: 0
[2025-06-04 15:10:21] 2025-06-04 12:57:39,245 [wrapper] pandaids: 6678071417
[2025-06-04 15:10:21] 2025-06-04 12:57:40,006 [wrapper] cleanup supervisor_pilot 14534 28076
[2025-06-04 15:10:21] 2025-06-04 12:57:40,132 [wrapper] Test setup, not cleaning
[2025-06-04 15:10:21] 2025-06-04 12:57:40,235 [wrapper] apfmon messages muted
[2025-06-04 15:10:21] 2025-06-04 12:57:40,267 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:10:21] 2025-06-04 12:57:40,357 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:10:21]  *** Error codes and diagnostics ***
[2025-06-04 15:10:21]     "exeErrorCode": 0,
[2025-06-04 15:10:21]     "exeErrorDiag": "",
[2025-06-04 15:10:21]     "pilotErrorCode": 0,
[2025-06-04 15:10:21]     "pilotErrorDiag": "",
[2025-06-04 15:10:21]  *** Listing of results directory ***
[2025-06-04 15:10:21] total 386724
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:36 pilot3.tar.gz
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:46 queuedata.json
[2025-06-04 15:10:21] -rwx------. 1 boinc boinc     37140 Jun  3 22:46 runpilot2-wrapper.sh
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc       100 Jun  4 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:10:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 11:04 run_atlas
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc       105 Jun  4 11:04 job.xml
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc      6393 Jun  4 11:04 init_data.xml
[2025-06-04 15:10:21] -rw-r--r--. 2 boinc boinc 214068568 Jun  4 11:04 EVNT.45006593._001813.pool.root.1
[2025-06-04 15:10:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:04 start_atlas.sh
[2025-06-04 15:10:21] drwxrwx--x. 2 boinc boinc        68 Jun  4 11:04 shared
[2025-06-04 15:10:21] -rw-r--r--. 2 boinc boinc    508876 Jun  4 11:04 input.tar.gz
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc         0 Jun  4 11:04 boinc_lockfile
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc      2524 Jun  4 11:04 pandaJob.out
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc    986774 Jun  4 11:07 agis_schedconf.cvmfs.json
[2025-06-04 15:10:21] drwx------. 4 boinc boinc      4096 Jun  4 11:07 pilot3
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc 175030469 Jun  4 14:54 HITS.45006595._045186.pool.root.1
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:55 boinc_task_state.xml
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc      1014 Jun  4 14:55 memory_monitor_summary.json
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc   1598969 Jun  4 14:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc    367158 Jun  4 14:55 log.45006595._045186.job.log.tgz.1
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc        95 Jun  4 14:57 pilot_heartbeat.json
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc      7707 Jun  4 14:57 heartbeat.json
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc      4417 Jun  4 14:57 pilotlog.txt
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc   1175068 Jun  4 14:57 log.45006595._045186.job.log.1
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc       357 Jun  4 14:57 output.list
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:57 runtime_log
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc   1566720 Jun  4 14:57 result.tar.gz
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc       657 Jun  4 14:57 tcAMDmvhng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmk6lKDmQINNLn.diag
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc      8673 Jun  4 14:57 runtime_log.err
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc      8192 Jun  4 15:10 boinc_mmap_file
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc        28 Jun  4 15:10 wrapper_checkpoint.txt
[2025-06-04 15:10:21] -rw-r--r--. 1 boinc boinc     20570 Jun  4 15:10 stderr.txt
[2025-06-04 15:10:21] HITS file was successfully produced:
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc 175030469 Jun  4 14:54 shared/HITS.pool.root.1
[2025-06-04 15:10:21]  *** Contents of shared directory: ***
[2025-06-04 15:10:21] total 382032
[2025-06-04 15:10:21] -rw-r--r--. 2 boinc boinc 214068568 Jun  4 11:04 ATLAS.root_0
[2025-06-04 15:10:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:04 start_atlas.sh
[2025-06-04 15:10:21] -rw-r--r--. 2 boinc boinc    508876 Jun  4 11:04 input.tar.gz
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc 175030469 Jun  4 14:54 HITS.pool.root.1
[2025-06-04 15:10:21] -rw-------. 1 boinc boinc   1566720 Jun  4 14:57 result.tar.gz
15:10:22 (22716): run_atlas exited; CPU time 49495.576322
15:10:22 (22716): called boinc_finish(0)

</stderr_txt>
]]>

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