Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:23:09 (2047276): wrapper (7.7.26015): starting
21:23:09 (2047276): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 21:23:09] Arguments: --nthreads 10
[2025-06-03 21:23:09] Threads: 10
[2025-06-03 21:23:09] Checking for CVMFS
[2025-06-03 21:23:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:23:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:23:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:23:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:23:09] 2.12.6.0 551375 178338 295924 146763 0 65 16899746 32935937 13846 130560 1 374485010 99.660 341385822 26780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 21:23:09] CVMFS is ok
[2025-06-03 21:23:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:23:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:23:09] Further information can be found at the LHC@home message board.
[2025-06-03 21:23:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:23:09] Checking for apptainer binary...
[2025-06-03 21:23:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:23:09] Running /usr/bin/apptainer --version
[2025-06-03 21:23:09] apptainer version 1.4.1-1.el9
[2025-06-03 21:23:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:23:09] c-4-40.aglt2.org
[2025-06-03 21:23:09] apptainer works
[2025-06-03 21:23:09] Set ATHENA_PROC_NUMBER=10
[2025-06-03 21:23:09] Set ATHENA_CORE_NUMBER=10
[2025-06-03 21:23:09] Starting ATLAS job with PandaID=6677975809
[2025-06-03 21:23:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:48:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:48:10]  is_altstaged=None
[2025-06-03 22:48:10]  is_tar=False
[2025-06-03 22:48:10]  lfn=log.45006595._042900.job.log.tgz.1
[2025-06-03 22:48:10]  mtime=0
[2025-06-03 22:48:10]  protocol_id=None
[2025-06-03 22:48:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 22:48:10]  replicas=None
[2025-06-03 22:48:10]  scope=mc23_13p6TeV
[2025-06-03 22:48:10]  status=None
[2025-06-03 22:48:10]  status_code=0
[2025-06-03 22:48:10]  storage_token=
[2025-06-03 22:48:10]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677975809/log.45006595._042900.job.log.tgz.1
[2025-06-03 22:48:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/47/log.45006595._042900.job.log.tgz.1
[2025-06-03 22:48:10]  workdir=None
[2025-06-03 22:48:10] ]
[2025-06-03 22:48:10] 2025-06-04 02:47:44,627 | INFO     | transferring file log.45006595._042900.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677975809/log.45006595._042900.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 22:48:10] 2025-06-04 02:47:44,628 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677975809/log.45006595._042900.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._042900.job
[2025-06-03 22:48:10] 2025-06-04 02:47:44,648 | INFO     | adding to output.list: log.45006595._042900.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/47/log.45006595._042900.job.log.tg
[2025-06-03 22:48:10] 2025-06-04 02:47:44,649 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 22:48:10] 2025-06-04 02:47:44,649 | INFO     | summary of transferred files:
[2025-06-03 22:48:10] 2025-06-04 02:47:44,649 | INFO     |  -- lfn=log.45006595._042900.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 22:48:10] 2025-06-04 02:47:44,649 | INFO     | stage-out finished correctly
[2025-06-03 22:48:10] 2025-06-04 02:47:45,973 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 22:48:10] 2025-06-04 02:47:46,098 | INFO     | monitor loop #372: job 0:6677975809 is in state 'finished'
[2025-06-03 22:48:10] 2025-06-04 02:47:46,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:48:10] 2025-06-04 02:47:47,525 | INFO     | job 6677975809 has state=finished
[2025-06-03 22:48:10] 2025-06-04 02:47:47,526 | INFO     | preparing for final server update for job 6677975809 in state='finished'
[2025-06-03 22:48:10] 2025-06-04 02:47:47,526 | INFO     | this job has now completed (state=finished)
[2025-06-03 22:48:10] 2025-06-04 02:47:47,526 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 22:48:10] 2025-06-04 02:47:47,527 | INFO     | log transfer has been attempted: DONE
[2025-06-03 22:48:10] 2025-06-04 02:47:47,527 | INFO     | job 6677975809 has finished - writing final server update
[2025-06-03 22:48:10] 2025-06-04 02:47:47,527 | INFO     | total number of processed events: 400 (read)
[2025-06-03 22:48:10] 2025-06-04 02:47:47,542 | INFO     | executing command: lscpu
[2025-06-03 22:48:10] 2025-06-04 02:47:47,608 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 22:48:10] 2025-06-04 02:47:48,601 | INFO     | monitor loop #373: job 0:6677975809 is in state 'finished'
[2025-06-03 22:48:10] 2025-06-04 02:47:48,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:48:10] 2025-06-04 02:47:51,105 | INFO     | monitor loop #374: job 0:6677975809 is in state 'finished'
[2025-06-03 22:48:10] 2025-06-04 02:47:51,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:48:10] 2025-06-04 02:47:51,338 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 22:48:10] 2025-06-04 02:47:51,339 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677975809/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:48:10] 2025-06-04 02:47:51,339 | INFO     | extracted standard info from prmon json
[2025-06-03 22:48:10] 2025-06-04 02:47:51,340 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:48:10] 2025-06-04 02:47:51,340 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:48:10] 2025-06-04 02:47:51,340 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:48:10] 2025-06-04 02:47:51,340 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:48:10] 2025-06-04 02:47:51,343 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:48:10] 2025-06-04 02:47:51,343 | INFO     | sum of square deviations: 136095575.0
[2025-06-03 22:48:10] 2025-06-04 02:47:51,344 | INFO     | sum of deviations: -425634209.9999981
[2025-06-03 22:48:10] 2025-06-04 02:47:51,344 | INFO     | mean x: 1749002820.5
[2025-06-03 22:48:10] 2025-06-04 02:47:51,344 | INFO     | mean y: 2424764.6578947366
[2025-06-03 22:48:10] 2025-06-04 02:47:51,344 | INFO     | -- intersect: 5472370674.297397
[2025-06-03 22:48:10] 2025-06-04 02:47:51,344 | INFO     | intersect: 5472370674.297397
[2025-06-03 22:48:10] 2025-06-04 02:47:51,345 | INFO     | chi2: 1.4486321518790133
[2025-06-03 22:48:10] 2025-06-04 02:47:51,345 | INFO     | -- intersect: 5472370674.297397
[2025-06-03 22:48:10] 2025-06-04 02:47:51,345 | INFO     | current memory leak: -3.13 B/s (using 76 data points, chi2=1.45)
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | ..............................
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | . Timing measurements:
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | . get job = 0 s
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | . initial setup = 2 s
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | . payload setup = 7 s
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | . stage-in = 0 s
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | . payload execution = 5035 s
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | . stage-out = 0 s
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | . log creation = 0 s
[2025-06-03 22:48:10] 2025-06-04 02:47:51,346 | INFO     | ..............................
[2025-06-03 22:48:10] 2025-06-04 02:47:51,458 | INFO     | 
[2025-06-03 22:48:10] 2025-06-04 02:47:51,458 | INFO     | job summary report
[2025-06-03 22:48:10] 2025-06-04 02:47:51,458 | INFO     | --------------------------------------------------
[2025-06-03 22:48:10] 2025-06-04 02:47:51,458 | INFO     | PanDA job id: 6677975809
[2025-06-03 22:48:10] 2025-06-04 02:47:51,458 | INFO     | task id: 45006595
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | errors: (none)
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | pilot state: finished 
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | transexitcode: 0
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | exeerrorcode: 0
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | exeerrordiag: 
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | exitcode: 0
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | exitmsg: OK
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | cpuconsumptiontime: 41966 s
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | nevents: 400
[2025-06-03 22:48:10] 2025-06-04 02:47:51,459 | INFO     | neventsw: 0
[2025-06-03 22:48:10] 2025-06-04 02:47:51,460 | INFO     | pid: 2057863
[2025-06-03 22:48:10] 2025-06-04 02:47:51,460 | INFO     | pgrp: 2057863
[2025-06-03 22:48:10] 2025-06-04 02:47:51,460 | INFO     | corecount: 10
[2025-06-03 22:48:10] 2025-06-04 02:47:51,460 | INFO     | event service: False
[2025-06-03 22:48:10] 2025-06-04 02:47:51,460 | INFO     | sizes: {0: 2405070, 1: 2405212, 5: 2405418, 11: 2405474, 5046: 2431558, 5047: 2431557, 5049: 2440682, 5050: 2440738, 5055: 2440908}
[2025-06-03 22:48:10] 2025-06-04 02:47:51,460 | INFO     | --------------------------------------------------
[2025-06-03 22:48:10] 2025-06-04 02:47:51,460 | INFO     | 
[2025-06-03 22:48:10] 2025-06-04 02:47:51,460 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 22:48:10] 2025-06-04 02:47:51,477 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:48:10] 2025-06-04 02:47:51,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:48:10] 2025-06-04 02:47:51,480 | INFO     | job 6677975809 has completed (purged errors)
[2025-06-03 22:48:10] 2025-06-04 02:47:51,480 | INFO     | overall cleanup function is called
[2025-06-03 22:48:10] 2025-06-04 02:47:52,488 | INFO     | --- collectZombieJob: --- 10, [2057863]
[2025-06-03 22:48:10] 2025-06-04 02:47:52,488 | INFO     | zombie collector waiting for pid 2057863
[2025-06-03 22:48:10] 2025-06-04 02:47:52,489 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:48:10] 2025-06-04 02:47:52,489 | INFO     | collected zombie processes
[2025-06-03 22:48:10] 2025-06-04 02:47:52,489 | INFO     | will attempt to kill all subprocesses of pid=2057863
[2025-06-03 22:48:10] 2025-06-04 02:47:52,828 | INFO     | process IDs to be killed: [2057863] (in reverse order)
[2025-06-03 22:48:10] 2025-06-04 02:47:52,922 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:48:10] 2025-06-04 02:47:52,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:48:10] 2025-06-04 02:47:52,935 | INFO     | did not find any defunct processes belonging to 2057863
[2025-06-03 22:48:10] 2025-06-04 02:47:52,947 | INFO     | did not find any defunct processes belonging to 2057863
[2025-06-03 22:48:10] 2025-06-04 02:47:52,948 | INFO     | ready for new job
[2025-06-03 22:48:10] 2025-06-04 02:47:52,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:48:10] 2025-06-04 02:47:52,950 | INFO     | **************************************
[2025-06-03 22:48:10] 2025-06-04 02:47:52,950 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:48:10] 2025-06-04 02:47:52,950 | INFO     | **************************************
[2025-06-03 22:48:10] 2025-06-04 02:47:52,950 | INFO     | 
[2025-06-03 22:48:10] 2025-06-04 02:47:52,964 | INFO     | architecture information:
[2025-06-03 22:48:10] 2025-06-04 02:47:52,964 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:48:10] 2025-06-04 02:47:52,980 | INFO     | cat /etc/os-release:
[2025-06-03 22:48:10] NAME="CentOS Linux"
[2025-06-03 22:48:10] VERSION="7 (Core)"
[2025-06-03 22:48:10] ID="centos"
[2025-06-03 22:48:10] ID_LIKE="rhel fedora"
[2025-06-03 22:48:10] VERSION_ID="7"
[2025-06-03 22:48:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:48:10] ANSI_COLOR="0;31"
[2025-06-03 22:48:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:48:10] HOME_URL="https://www.centos.org/"
[2025-06-03 22:48:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:48:10] 
[2025-06-03 22:48:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:48:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:48:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:48:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:48:10] 
[2025-06-03 22:48:10] 2025-06-04 02:47:52,980 | INFO     | **************************************
[2025-06-03 22:48:10] 2025-06-04 02:47:53,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 22:48:10] 2025-06-04 02:47:53,500 | INFO     | sufficient remaining disk space (76510396416 B)
[2025-06-03 22:48:10] 2025-06-04 02:47:53,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:48:10] 2025-06-04 02:47:53,500 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:48:10] 2025-06-04 02:47:53,500 | INFO     | update_server=False
[2025-06-03 22:48:10] 2025-06-04 02:47:53,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:48:10] 2025-06-04 02:47:53,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:48:10] 2025-06-04 02:47:53,606 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 22:48:10] 2025-06-04 02:47:53,606 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 22:48:10] 2025-06-04 02:47:53,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:48:10] 2025-06-04 02:47:53,607 | INFO     | will abort loop
[2025-06-03 22:48:10] 2025-06-04 02:47:53,720 | INFO     | all data control threads have been joined
[2025-06-03 22:48:10] 2025-06-04 02:47:53,998 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:48:10] 2025-06-04 02:47:53,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:48:10] 2025-06-04 02:47:53,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:48:10] 2025-06-04 02:47:54,492 | INFO     | all job control threads have been joined
[2025-06-03 22:48:10] 2025-06-04 02:47:54,506 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:54,509 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:54,541 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:54,610 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:54,681 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:54,721 | INFO     | [data] control thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:54,982 | INFO     | all payload control threads have been joined
[2025-06-03 22:48:10] 2025-06-04 02:47:55,323 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:55,404 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:55,497 | INFO     | [job] control thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:55,506 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:55,543 | INFO     | [job] validate thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:55,552 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:55,988 | INFO     | [payload] control thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:47:56,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:48:10] 2025-06-04 02:47:56,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:48:10] 2025-06-04 02:47:57,471 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:48:00,590 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:48:03,956 | INFO     | job.realtimelogging is not enabled
[2025-06-03 22:48:10] 2025-06-04 02:48:04,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:48:10] 2025-06-04 02:48:05,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037240371008)>', '<ExcThread(monitor, started 140036888565504)>']
[2025-06-03 22:48:10] 2025-06-04 02:48:06,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:48:10] 2025-06-04 02:48:06,055 | INFO     | [monitor] control thread has ended
[2025-06-03 22:48:10] 2025-06-04 02:48:10,176 | INFO     | all workflow threads have been joined
[2025-06-03 22:48:10] 2025-06-04 02:48:10,176 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:48:10] 2025-06-04 02:48:10,177 | INFO     | traces error code: 0
[2025-06-03 22:48:10] 2025-06-04 02:48:10,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:48:10] 2025-06-04 02:48:10,389 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:48:10] 2025-06-04 02:48:10,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:48:10] 2025-06-04 02:48:10,394 [wrapper] pilotpid: 2050864
[2025-06-03 22:48:10] 2025-06-04 02:48:10,397 [wrapper] Pilot exit status: 0
[2025-06-03 22:48:10] 2025-06-04 02:48:10,408 [wrapper] pandaids: 6677975809
[2025-06-03 22:48:10] 2025-06-04 02:48:10,480 [wrapper] cleanup supervisor_pilot 2258063 2050865
[2025-06-03 22:48:10] 2025-06-04 02:48:10,483 [wrapper] Test setup, not cleaning
[2025-06-03 22:48:10] 2025-06-04 02:48:10,485 [wrapper] apfmon messages muted
[2025-06-03 22:48:10] 2025-06-04 02:48:10,489 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:48:10] 2025-06-04 02:48:10,491 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:48:10]  *** Error codes and diagnostics ***
[2025-06-03 22:48:10]     "exeErrorCode": 0,
[2025-06-03 22:48:10]     "exeErrorDiag": "",
[2025-06-03 22:48:10]     "pilotErrorCode": 0,
[2025-06-03 22:48:10]     "pilotErrorDiag": "",
[2025-06-03 22:48:10]  *** Listing of results directory ***
[2025-06-03 22:48:10] total 393528
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 14:58 queuedata.json
[2025-06-03 22:48:10] -rwx------. 1 boincer umatlas     37140 Jun  3 15:00 runpilot2-wrapper.sh
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas       100 Jun  3 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:48:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 21:23 run_atlas
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas       105 Jun  3 21:23 job.xml
[2025-06-03 22:48:10] -rw-r--r--. 2 boincer umatlas 215930209 Jun  3 21:23 EVNT.45006593._001719.pool.root.1
[2025-06-03 22:48:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:23 start_atlas.sh
[2025-06-03 22:48:10] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 21:23 shared
[2025-06-03 22:48:10] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 21:23 input.tar.gz
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas         0 Jun  3 21:23 boinc_lockfile
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 21:23 pandaJob.out
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas    986077 Jun  3 21:23 agis_schedconf.cvmfs.json
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:23 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:48:10] drwx------. 4 boincer umatlas      4096 Jun  3 21:23 pilot3
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 22:36 init_data.xml
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas 181566634 Jun  3 22:47 HITS.45006595._042900.pool.root.1
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas       529 Jun  3 22:47 boinc_task_state.xml
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas        95 Jun  3 22:47 pilot_heartbeat.json
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas      1051 Jun  3 22:47 memory_monitor_summary.json
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas    329223 Jun  3 22:47 log.45006595._042900.job.log.tgz.1
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas      7713 Jun  3 22:47 heartbeat.json
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas        27 Jun  3 22:47 wrapper_checkpoint.txt
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 22:47 boinc_mmap_file
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas      4611 Jun  3 22:48 pilotlog.txt
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas    492472 Jun  3 22:48 log.45006595._042900.job.log.1
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas       357 Jun  3 22:48 output.list
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas       620 Jun  3 22:48 runtime_log
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas    839680 Jun  3 22:48 result.tar.gz
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas      8651 Jun  3 22:48 runtime_log.err
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas       651 Jun  3 22:48 74wKDmV3lg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmucZKDmufARin.diag
[2025-06-03 22:48:10] -rw-r--r--. 1 boincer umatlas     21403 Jun  3 22:48 stderr.txt
[2025-06-03 22:48:10] HITS file was successfully produced:
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas 181566634 Jun  3 22:47 shared/HITS.pool.root.1
[2025-06-03 22:48:10]  *** Contents of shared directory: ***
[2025-06-03 22:48:10] total 389524
[2025-06-03 22:48:10] -rw-r--r--. 2 boincer umatlas 215930209 Jun  3 21:23 ATLAS.root_0
[2025-06-03 22:48:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:23 start_atlas.sh
[2025-06-03 22:48:10] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 21:23 input.tar.gz
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas 181566634 Jun  3 22:47 HITS.pool.root.1
[2025-06-03 22:48:10] -rw-------. 1 boincer umatlas    839680 Jun  3 22:48 result.tar.gz
22:48:12 (2047276): run_atlas exited; CPU time 42067.924564
22:48:12 (2047276): called boinc_finish(0)

</stderr_txt>
]]>

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