Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:49:20 (27728): wrapper (7.7.26015): starting
09:49:20 (27728): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:49:20] Arguments: --nthreads 8
[2025-06-04 09:49:20] Threads: 8
[2025-06-04 09:49:20] Checking for CVMFS
[2025-06-04 09:49:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:49:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:49:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:49:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:49:22] 2.11.2.0 7420 32917 95548 146772 0 103 17799856 25165824 2745 130560 0 16403601 99.790 19810719 2293 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 09:49:22] CVMFS is ok
[2025-06-04 09:49:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:49:22] Checking for apptainer binary...
[2025-06-04 09:49:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:49:22] Running /usr/bin/apptainer --version
[2025-06-04 09:49:22] apptainer version 1.3.2-1.el7
[2025-06-04 09:49:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:51:04] cg-vwn450.simple-grid.lan
[2025-06-04 09:51:04] apptainer works
[2025-06-04 09:51:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:51:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:51:04] Starting ATLAS job with PandaID=6678071151
[2025-06-04 09:51:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:37:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:37:28] 2025-06-04 11:46:27,893 | INFO     | monitor loop #1019: job 0:6678071151 is in state 'finished'
[2025-06-04 16:37:28] 2025-06-04 11:46:27,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:37:28] 2025-06-04 11:46:28,364 | INFO     | 13947s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 16:37:28] 2025-06-04 11:46:30,398 | INFO     | monitor loop #1020: job 0:6678071151 is in state 'finished'
[2025-06-04 16:37:28] 2025-06-04 11:46:30,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:37:28] 2025-06-04 11:46:32,906 | INFO     | monitor loop #1021: job 0:6678071151 is in state 'finished'
[2025-06-04 16:37:28] 2025-06-04 11:46:32,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:37:28] 2025-06-04 11:46:33,154 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 16:37:28] 2025-06-04 11:46:33,154 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6678071151/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:37:28] 2025-06-04 11:46:33,155 | INFO     | extracted standard info from prmon json
[2025-06-04 16:37:28] 2025-06-04 11:46:33,155 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:37:28] 2025-06-04 11:46:33,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:37:28] 2025-06-04 11:46:33,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:37:28] 2025-06-04 11:46:33,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:37:28] 2025-06-04 11:46:33,161 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:37:28] 2025-06-04 11:46:33,162 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,164 | INFO     | sum of deviations: 41817747758.5
[2025-06-04 16:37:28] 2025-06-04 11:46:33,164 | INFO     | mean x: 1749030789.5
[2025-06-04 16:37:28] 2025-06-04 11:46:33,164 | INFO     | mean y: 2443844.3863636362
[2025-06-04 16:37:28] 2025-06-04 11:46:33,164 | INFO     | -- intersect: -22149946736.837482
[2025-06-04 16:37:28] 2025-06-04 11:46:33,165 | INFO     | intersect: -22149946736.837482
[2025-06-04 16:37:28] 2025-06-04 11:46:33,165 | INFO     | chi2: 4.514381650598111
[2025-06-04 16:37:28] 2025-06-04 11:46:33,166 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,167 | INFO     | sum of deviations: 54983481306.0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,168 | INFO     | mean x: 1749030637.0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,168 | INFO     | mean y: 2452783.4837209303
[2025-06-04 16:37:28] 2025-06-04 11:46:33,168 | INFO     | -- intersect: -31204060138.63275
[2025-06-04 16:37:28] 2025-06-04 11:46:33,168 | INFO     | intersect: -31204060138.63275
[2025-06-04 16:37:28] 2025-06-04 11:46:33,168 | INFO     | chi2: 3.779508358621848
[2025-06-04 16:37:28] 2025-06-04 11:46:33,169 | INFO     | current chi2=3.779508358621848 (change=16.278492800423713 %)
[2025-06-04 16:37:28] 2025-06-04 11:46:33,169 | INFO     | right removable region: 214
[2025-06-04 16:37:28] 2025-06-04 11:46:33,169 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,171 | INFO     | sum of deviations: -20591624210.0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,171 | INFO     | mean x: 1749030942.0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,171 | INFO     | mean y: 2486898.0558139533
[2025-06-04 16:37:28] 2025-06-04 11:46:33,171 | INFO     | -- intersect: 11689504231.08567
[2025-06-04 16:37:28] 2025-06-04 11:46:33,171 | INFO     | intersect: 11689504231.08567
[2025-06-04 16:37:28] 2025-06-04 11:46:33,172 | INFO     | chi2: 0.9366223860019227
[2025-06-04 16:37:28] 2025-06-04 11:46:33,172 | INFO     | current chi2=0.9366223860019227 (change=79.25247667356992 %)
[2025-06-04 16:37:28] 2025-06-04 11:46:33,172 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 16:37:28] 2025-06-04 11:46:33,174 | INFO     | sum of deviations: -23073983067.5
[2025-06-04 16:37:28] 2025-06-04 11:46:33,174 | INFO     | mean x: 1749031094.5
[2025-06-04 16:37:28] 2025-06-04 11:46:33,174 | INFO     | mean y: 2488622.880952381
[2025-06-04 16:37:28] 2025-06-04 11:46:33,174 | INFO     | -- intersect: 14056284454.217081
[2025-06-04 16:37:28] 2025-06-04 11:46:33,175 | INFO     | intersect: 14056284454.217081
[2025-06-04 16:37:28] 2025-06-04 11:46:33,175 | INFO     | chi2: 0.8777086966860875
[2025-06-04 16:37:28] 2025-06-04 11:46:33,175 | INFO     | current chi2=0.8777086966860875 (change=6.2900150793229335 %)
[2025-06-04 16:37:28] 2025-06-04 11:46:33,175 | INFO     | left removable region: 20
[2025-06-04 16:37:28] 2025-06-04 11:46:33,176 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 16:37:28] 2025-06-04 11:46:33,177 | INFO     | sum of deviations: 5499497456.0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,178 | INFO     | mean x: 1749031216.5
[2025-06-04 16:37:28] 2025-06-04 11:46:33,178 | INFO     | mean y: 2486976.0103092785
[2025-06-04 16:37:28] 2025-06-04 11:46:33,178 | INFO     | -- intersect: -4246138921.2219615
[2025-06-04 16:37:28] 2025-06-04 11:46:33,178 | INFO     | intersect: -4246138921.2219615
[2025-06-04 16:37:28] 2025-06-04 11:46:33,178 | INFO     | chi2: 0.0005246934985238958
[2025-06-04 16:37:28] 2025-06-04 11:46:33,179 | INFO     | -- intersect: -4246138921.2219615
[2025-06-04 16:37:28] 2025-06-04 11:46:33,179 | INFO     | current memory leak: 2.43 B/s (using 194 data points, chi2=0.00)
[2025-06-04 16:37:28] 2025-06-04 11:46:33,180 | INFO     | ..............................
[2025-06-04 16:37:28] 2025-06-04 11:46:33,180 | INFO     | . Timing measurements:
[2025-06-04 16:37:28] 2025-06-04 11:46:33,180 | INFO     | . get job = 0 s
[2025-06-04 16:37:28] 2025-06-04 11:46:33,180 | INFO     | . initial setup = 3 s
[2025-06-04 16:37:28] 2025-06-04 11:46:33,180 | INFO     | . payload setup = 143 s
[2025-06-04 16:37:28] 2025-06-04 11:46:33,180 | INFO     | . stage-in = 0 s
[2025-06-04 16:37:28] 2025-06-04 11:46:33,180 | INFO     | . payload execution = 13524 s
[2025-06-04 16:37:28] 2025-06-04 11:46:33,180 | INFO     | . stage-out = 3 s
[2025-06-04 16:37:28] 2025-06-04 11:46:33,181 | INFO     | . log creation = 1 s
[2025-06-04 16:37:28] 2025-06-04 11:46:33,181 | INFO     | ..............................
[2025-06-04 16:37:28] 2025-06-04 11:46:33,351 | INFO     | 
[2025-06-04 16:37:28] 2025-06-04 11:46:33,351 | INFO     | job summary report
[2025-06-04 16:37:28] 2025-06-04 11:46:33,351 | INFO     | --------------------------------------------------
[2025-06-04 16:37:28] 2025-06-04 11:46:33,351 | INFO     | PanDA job id: 6678071151
[2025-06-04 16:37:28] 2025-06-04 11:46:33,351 | INFO     | task id: 45006595
[2025-06-04 16:37:28] 2025-06-04 11:46:33,351 | INFO     | errors: (none)
[2025-06-04 16:37:28] 2025-06-04 11:46:33,352 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:37:28] 2025-06-04 11:46:33,352 | INFO     | pilot state: finished 
[2025-06-04 16:37:28] 2025-06-04 11:46:33,352 | INFO     | transexitcode: 0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,352 | INFO     | exeerrorcode: 0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,352 | INFO     | exeerrordiag: 
[2025-06-04 16:37:28] 2025-06-04 11:46:33,352 | INFO     | exitcode: 0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,352 | INFO     | exitmsg: OK
[2025-06-04 16:37:28] 2025-06-04 11:46:33,352 | INFO     | cpuconsumptiontime: 50470 s
[2025-06-04 16:37:28] 2025-06-04 11:46:33,352 | INFO     | nevents: 400
[2025-06-04 16:37:28] 2025-06-04 11:46:33,353 | INFO     | neventsw: 0
[2025-06-04 16:37:28] 2025-06-04 11:46:33,353 | INFO     | pid: 10904
[2025-06-04 16:37:28] 2025-06-04 11:46:33,353 | INFO     | pgrp: 10904
[2025-06-04 16:37:28] 2025-06-04 11:46:33,353 | INFO     | corecount: 8
[2025-06-04 16:37:28] 2025-06-04 11:46:33,353 | INFO     | event service: False
[2025-06-04 16:37:28] 2025-06-04 11:46:33,353 | INFO     | sizes: {0: 2404356, 1: 2405042, 2: 2405241, 13: 2405241, 23: 2405297, 34: 2405325, 45: 2405481, 56: 2405509, 66: 2405537, 77: 2405565, 86: 2405827, 88: 2406135, 13
[2025-06-04 16:37:28] 2025-06-04 11:46:33,353 | INFO     | --------------------------------------------------
[2025-06-04 16:37:28] 2025-06-04 11:46:33,353 | INFO     | 
[2025-06-04 16:37:28] 2025-06-04 11:46:33,354 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-04 16:37:28] 2025-06-04 11:46:34,056 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,056 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,058 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:37:28] 2025-06-04 11:46:34,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:37:28] 2025-06-04 11:46:34,058 | INFO     | job 6678071151 has completed (purged errors)
[2025-06-04 16:37:28] 2025-06-04 11:46:34,059 | INFO     | overall cleanup function is called
[2025-06-04 16:37:28] 2025-06-04 11:46:35,068 | INFO     | --- collectZombieJob: --- 10, [10904]
[2025-06-04 16:37:28] 2025-06-04 11:46:35,068 | INFO     | zombie collector waiting for pid 10904
[2025-06-04 16:37:28] 2025-06-04 11:46:35,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:37:28] 2025-06-04 11:46:35,068 | INFO     | collected zombie processes
[2025-06-04 16:37:28] 2025-06-04 11:46:35,068 | INFO     | will attempt to kill all subprocesses of pid=10904
[2025-06-04 16:37:28] 2025-06-04 11:46:35,208 | INFO     | process IDs to be killed: [10904] (in reverse order)
[2025-06-04 16:37:28] 2025-06-04 11:46:35,994 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:37:28] 2025-06-04 11:46:35,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:37:28] 2025-06-04 11:46:35,998 | INFO     | did not find any defunct processes belonging to 10904
[2025-06-04 16:37:28] 2025-06-04 11:46:36,002 | INFO     | did not find any defunct processes belonging to 10904
[2025-06-04 16:37:28] 2025-06-04 11:46:36,002 | INFO     | ready for new job
[2025-06-04 16:37:28] 2025-06-04 11:46:36,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:37:28] 2025-06-04 11:46:36,005 | INFO     | **************************************
[2025-06-04 16:37:28] 2025-06-04 11:46:36,005 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:37:28] 2025-06-04 11:46:36,005 | INFO     | **************************************
[2025-06-04 16:37:28] 2025-06-04 11:46:36,005 | INFO     | 
[2025-06-04 16:37:28] 2025-06-04 11:46:36,006 | INFO     | pilot is running in a VM
[2025-06-04 16:37:28] 2025-06-04 11:46:36,006 | INFO     | architecture information:
[2025-06-04 16:37:28] 2025-06-04 11:46:36,008 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:37:28] 2025-06-04 11:46:36,115 | INFO     | cat /etc/os-release:
[2025-06-04 16:37:28] NAME="CentOS Linux"
[2025-06-04 16:37:28] VERSION="7 (Core)"
[2025-06-04 16:37:28] ID="centos"
[2025-06-04 16:37:28] ID_LIKE="rhel fedora"
[2025-06-04 16:37:28] VERSION_ID="7"
[2025-06-04 16:37:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:37:28] ANSI_COLOR="0;31"
[2025-06-04 16:37:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:37:28] HOME_URL="https://www.centos.org/"
[2025-06-04 16:37:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:37:28] 
[2025-06-04 16:37:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:37:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:37:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:37:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:37:28] 
[2025-06-04 16:37:28] 2025-06-04 11:46:36,116 | INFO     | **************************************
[2025-06-04 16:37:28] 2025-06-04 11:46:36,619 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-04 16:37:28] 2025-06-04 11:46:36,801 | INFO     | sufficient remaining disk space (497222156288 B)
[2025-06-04 16:37:28] 2025-06-04 11:46:36,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:37:28] 2025-06-04 11:46:36,802 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:37:28] 2025-06-04 11:46:36,802 | INFO     | update_server=False
[2025-06-04 16:37:28] 2025-06-04 11:46:36,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:37:28] 2025-06-04 11:46:36,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:37:28] 2025-06-04 11:46:36,804 | INFO     | aborting loop
[2025-06-04 16:37:28] 2025-06-04 11:46:37,403 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:37:28] 2025-06-04 11:46:37,403 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:37:28] 2025-06-04 11:46:37,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:37:28] 2025-06-04 11:46:37,419 | INFO     | all data control threads have been joined
[2025-06-04 16:37:28] 2025-06-04 11:46:37,553 | INFO     | all job control threads have been joined
[2025-06-04 16:37:28] 2025-06-04 11:46:37,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:37:28] 2025-06-04 11:46:37,808 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:37,810 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:37,987 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:38,036 | INFO     | all payload control threads have been joined
[2025-06-04 16:37:28] 2025-06-04 11:46:38,044 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:38,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:37:28] 2025-06-04 11:46:38,425 | INFO     | [data] control thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:38,465 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:38,559 | INFO     | [job] control thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:38,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:37:28] 2025-06-04 11:46:38,763 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:38,821 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:38,840 | INFO     | [job] validate thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:38,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:39,017 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:39,042 | INFO     | [payload] control thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:39,368 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:39,606 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:42,580 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:37:28] 2025-06-04 11:46:44,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843753129792)>', '<ExcThread(monitor, started 139843162060544)>']
[2025-06-04 16:37:28] 2025-06-04 11:46:44,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:37:28] 2025-06-04 11:46:44,442 | INFO     | [monitor] control thread has ended
[2025-06-04 16:37:28] 2025-06-04 11:46:49,070 | INFO     | all workflow threads have been joined
[2025-06-04 16:37:28] 2025-06-04 11:46:49,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:37:28] 2025-06-04 11:46:49,070 | INFO     | traces error code: 0
[2025-06-04 16:37:28] 2025-06-04 11:46:49,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:37:28] 2025-06-04 11:46:49,426 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:37:28] 2025-06-04 11:46:49,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:37:28] 2025-06-04 11:46:49,577 [wrapper] pilotpid: 1034
[2025-06-04 16:37:28] 2025-06-04 11:46:49,646 [wrapper] Pilot exit status: 0
[2025-06-04 16:37:28] 2025-06-04 11:46:50,139 [wrapper] pandaids: 6678071151
[2025-06-04 16:37:28] 2025-06-04 11:46:50,962 [wrapper] cleanup supervisor_pilot 10252 1035
[2025-06-04 16:37:28] 2025-06-04 11:46:51,078 [wrapper] Test setup, not cleaning
[2025-06-04 16:37:28] 2025-06-04 11:46:51,166 [wrapper] apfmon messages muted
[2025-06-04 16:37:28] 2025-06-04 11:46:51,262 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:37:28] 2025-06-04 11:46:51,320 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:37:28]  *** Error codes and diagnostics ***
[2025-06-04 16:37:28]     "exeErrorCode": 0,
[2025-06-04 16:37:28]     "exeErrorDiag": "",
[2025-06-04 16:37:28]     "pilotErrorCode": 0,
[2025-06-04 16:37:28]     "pilotErrorDiag": "",
[2025-06-04 16:37:28]  *** Listing of results directory ***
[2025-06-04 16:37:28] total 388704
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:36 pilot3.tar.gz
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:38 queuedata.json
[2025-06-04 16:37:28] -rwx------. 1 boinc boinc     37140 Jun  3 22:38 runpilot2-wrapper.sh
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc       100 Jun  4 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:37:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 09:49 run_atlas
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc       105 Jun  4 09:49 job.xml
[2025-06-04 16:37:28] -rw-r--r--. 2 boinc boinc 214686005 Jun  4 09:49 EVNT.45006593._001806.pool.root.1
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc      6393 Jun  4 09:49 init_data.xml
[2025-06-04 16:37:28] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:49 start_atlas.sh
[2025-06-04 16:37:28] drwxrwx--x. 2 boinc boinc        68 Jun  4 09:49 shared
[2025-06-04 16:37:28] -rw-r--r--. 2 boinc boinc    508883 Jun  4 09:49 input.tar.gz
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc         0 Jun  4 09:49 boinc_lockfile
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc      2525 Jun  4 09:51 pandaJob.out
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc    986745 Jun  4 09:54 agis_schedconf.cvmfs.json
[2025-06-04 16:37:28] drwx------. 4 boinc boinc      4096 Jun  4 09:54 pilot3
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc 176394095 Jun  4 13:43 HITS.45006595._045013.pool.root.1
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc       531 Jun  4 13:43 boinc_task_state.xml
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc      1017 Jun  4 13:44 memory_monitor_summary.json
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc   1598969 Jun  4 13:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc    373474 Jun  4 13:45 log.45006595._045013.job.log.tgz.1
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc        95 Jun  4 13:46 pilot_heartbeat.json
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc      7688 Jun  4 13:46 heartbeat.json
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc      4417 Jun  4 13:46 pilotlog.txt
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc   1195126 Jun  4 13:46 log.45006595._045013.job.log.1
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc       357 Jun  4 13:46 output.list
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:46 runtime_log
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc   1587200 Jun  4 13:46 result.tar.gz
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc       656 Jun  4 13:46 SmsKDmQang7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLuZKDmJsvBkn.diag
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc      8673 Jun  4 13:46 runtime_log.err
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc      8192 Jun  4 16:37 boinc_mmap_file
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc        28 Jun  4 16:37 wrapper_checkpoint.txt
[2025-06-04 16:37:28] -rw-r--r--. 1 boinc boinc     20787 Jun  4 16:37 stderr.txt
[2025-06-04 16:37:28] HITS file was successfully produced:
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc 176394095 Jun  4 13:43 shared/HITS.pool.root.1
[2025-06-04 16:37:28]  *** Contents of shared directory: ***
[2025-06-04 16:37:28] total 383984
[2025-06-04 16:37:28] -rw-r--r--. 2 boinc boinc 214686005 Jun  4 09:49 ATLAS.root_0
[2025-06-04 16:37:28] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:49 start_atlas.sh
[2025-06-04 16:37:28] -rw-r--r--. 2 boinc boinc    508883 Jun  4 09:49 input.tar.gz
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc 176394095 Jun  4 13:43 HITS.pool.root.1
[2025-06-04 16:37:28] -rw-------. 1 boinc boinc   1587200 Jun  4 13:46 result.tar.gz
16:37:30 (27728): run_atlas exited; CPU time 50661.705354
16:37:30 (27728): called boinc_finish(0)

</stderr_txt>
]]>

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