Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:38:55 (917): wrapper (7.7.26015): starting
20:38:55 (917): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 20:38:55] Arguments: --nthreads 8
[2025-06-03 20:38:55] Threads: 8
[2025-06-03 20:38:55] Checking for CVMFS
[2025-06-03 20:38:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:38:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:38:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:38:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:38:56] 2.11.2.0 2952 34973 93276 146762 3 57 14605732 20275201 1 130560 0 11924658 99.960 7098681 8417 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 20:38:56] CVMFS is ok
[2025-06-03 20:38:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:38:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:38:56] Further information can be found at the LHC@home message board.
[2025-06-03 20:38:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:38:56] Checking for apptainer binary...
[2025-06-03 20:38:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:38:56] Running /usr/bin/apptainer --version
[2025-06-03 20:38:56] apptainer version 1.3.2-1.el7
[2025-06-03 20:38:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:38:57] c-204-35.aglt2.org
[2025-06-03 20:38:57] apptainer works
[2025-06-03 20:38:57] Set ATHENA_PROC_NUMBER=8
[2025-06-03 20:38:57] Set ATHENA_CORE_NUMBER=8
[2025-06-03 20:38:57] Starting ATLAS job with PandaID=6678071463
[2025-06-03 20:38:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:28:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:28:40] 2025-06-04 02:28:21,988 | INFO     | total number of processed events: 400 (read)
[2025-06-03 22:28:40] 2025-06-04 02:28:21,990 | INFO     | executing command: lscpu
[2025-06-03 22:28:40] 2025-06-04 02:28:22,022 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 22:28:40] 2025-06-04 02:28:23,466 | INFO     | monitor loop #486: job 0:6678071463 is in state 'finished'
[2025-06-03 22:28:40] 2025-06-04 02:28:23,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:28:40] 2025-06-04 02:28:25,970 | INFO     | monitor loop #487: job 0:6678071463 is in state 'finished'
[2025-06-03 22:28:40] 2025-06-04 02:28:25,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:28:40] 2025-06-04 02:28:27,773 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 22:28:40] 2025-06-04 02:28:27,774 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678071463/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:28:40] 2025-06-04 02:28:27,775 | INFO     | extracted standard info from prmon json
[2025-06-03 22:28:40] 2025-06-04 02:28:27,775 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:28:40] 2025-06-04 02:28:27,775 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:28:40] 2025-06-04 02:28:27,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:28:40] 2025-06-04 02:28:27,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:28:40] 2025-06-04 02:28:27,779 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:28:40] 2025-06-04 02:28:27,780 | INFO     | sum of square deviations: 379832238.0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,780 | INFO     | sum of deviations: 2053387489.999996
[2025-06-03 22:28:40] 2025-06-04 02:28:27,781 | INFO     | mean x: 1749000820.0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,781 | INFO     | mean y: 2509752.971962617
[2025-06-03 22:28:40] 2025-06-04 02:28:27,781 | INFO     | -- intersect: -9452655039.511332
[2025-06-03 22:28:40] 2025-06-04 02:28:27,781 | INFO     | intersect: -9452655039.511332
[2025-06-03 22:28:40] 2025-06-04 02:28:27,781 | INFO     | chi2: 1.6504081588164268
[2025-06-03 22:28:40] 2025-06-04 02:28:27,782 | INFO     | sum of square deviations: 329031285.5
[2025-06-03 22:28:40] 2025-06-04 02:28:27,782 | INFO     | sum of deviations: 2246861281.499998
[2025-06-03 22:28:40] 2025-06-04 02:28:27,783 | INFO     | mean x: 1749000667.5
[2025-06-03 22:28:40] 2025-06-04 02:28:27,783 | INFO     | mean y: 2510334.2843137253
[2025-06-03 22:28:40] 2025-06-04 02:28:27,783 | INFO     | -- intersect: -11940918920.935863
[2025-06-03 22:28:40] 2025-06-04 02:28:27,783 | INFO     | intersect: -11940918920.935863
[2025-06-03 22:28:40] 2025-06-04 02:28:27,783 | INFO     | chi2: 1.65300494978186
[2025-06-03 22:28:40] 2025-06-04 02:28:27,784 | INFO     | current chi2=1.65300494978186 (change=-0.15734234901598254 %)
[2025-06-03 22:28:40] 2025-06-04 02:28:27,784 | INFO     | right removable region: 101
[2025-06-03 22:28:40] 2025-06-04 02:28:27,784 | INFO     | sum of square deviations: 329031285.5
[2025-06-03 22:28:40] 2025-06-04 02:28:27,785 | INFO     | sum of deviations: -13960803430.0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,785 | INFO     | mean x: 1749000972.5
[2025-06-03 22:28:40] 2025-06-04 02:28:27,785 | INFO     | mean y: 2556779.1764705884
[2025-06-03 22:28:40] 2025-06-04 02:28:27,785 | INFO     | -- intersect: 74212699862.82356
[2025-06-03 22:28:40] 2025-06-04 02:28:27,785 | INFO     | intersect: 74212699862.82356
[2025-06-03 22:28:40] 2025-06-04 02:28:27,786 | INFO     | chi2: 0.13402177867604373
[2025-06-03 22:28:40] 2025-06-04 02:28:27,786 | INFO     | current chi2=0.13402177867604373 (change=91.87947672458453 %)
[2025-06-03 22:28:40] 2025-06-04 02:28:27,786 | INFO     | sum of square deviations: 282974608.0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,787 | INFO     | sum of deviations: -14352182236.000002
[2025-06-03 22:28:40] 2025-06-04 02:28:27,787 | INFO     | mean x: 1749001125.0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,787 | INFO     | mean y: 2557902.1649484537
[2025-06-03 22:28:40] 2025-06-04 02:28:27,787 | INFO     | -- intersect: 88710103269.51826
[2025-06-03 22:28:40] 2025-06-04 02:28:27,787 | INFO     | intersect: 88710103269.51826
[2025-06-03 22:28:40] 2025-06-04 02:28:27,788 | INFO     | chi2: 0.10141561365330617
[2025-06-03 22:28:40] 2025-06-04 02:28:27,788 | INFO     | current chi2=0.10141561365330617 (change=24.32900484148393 %)
[2025-06-03 22:28:40] 2025-06-04 02:28:27,788 | INFO     | left removable region: 20
[2025-06-03 22:28:40] 2025-06-04 02:28:27,788 | INFO     | sum of square deviations: 164765880.0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,788 | INFO     | sum of deviations: -7954796377.999997
[2025-06-03 22:28:40] 2025-06-04 02:28:27,789 | INFO     | mean x: 1749001247.0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,789 | INFO     | mean y: 2538105.6049382715
[2025-06-03 22:28:40] 2025-06-04 02:28:27,789 | INFO     | -- intersect: 84443253530.13991
[2025-06-03 22:28:40] 2025-06-04 02:28:27,789 | INFO     | intersect: 84443253530.13991
[2025-06-03 22:28:40] 2025-06-04 02:28:27,789 | INFO     | chi2: 0.08707197572967659
[2025-06-03 22:28:40] 2025-06-04 02:28:27,789 | INFO     | -- intersect: 84443253530.13991
[2025-06-03 22:28:40] 2025-06-04 02:28:27,789 | INFO     | current memory leak: -48.28 B/s (using 81 data points, chi2=0.09)
[2025-06-03 22:28:40] 2025-06-04 02:28:27,790 | INFO     | ..............................
[2025-06-03 22:28:40] 2025-06-04 02:28:27,790 | INFO     | . Timing measurements:
[2025-06-03 22:28:40] 2025-06-04 02:28:27,790 | INFO     | . get job = 0 s
[2025-06-03 22:28:40] 2025-06-04 02:28:27,790 | INFO     | . initial setup = 2 s
[2025-06-03 22:28:40] 2025-06-04 02:28:27,790 | INFO     | . payload setup = 11 s
[2025-06-03 22:28:40] 2025-06-04 02:28:27,790 | INFO     | . stage-in = 0 s
[2025-06-03 22:28:40] 2025-06-04 02:28:27,791 | INFO     | . payload execution = 6509 s
[2025-06-03 22:28:40] 2025-06-04 02:28:27,791 | INFO     | . stage-out = 1 s
[2025-06-03 22:28:40] 2025-06-04 02:28:27,791 | INFO     | . log creation = 0 s
[2025-06-03 22:28:40] 2025-06-04 02:28:27,791 | INFO     | ..............................
[2025-06-03 22:28:40] 2025-06-04 02:28:27,884 | INFO     | 
[2025-06-03 22:28:40] 2025-06-04 02:28:27,884 | INFO     | job summary report
[2025-06-03 22:28:40] 2025-06-04 02:28:27,884 | INFO     | --------------------------------------------------
[2025-06-03 22:28:40] 2025-06-04 02:28:27,885 | INFO     | PanDA job id: 6678071463
[2025-06-03 22:28:40] 2025-06-04 02:28:27,885 | INFO     | task id: 45006595
[2025-06-03 22:28:40] 2025-06-04 02:28:27,885 | INFO     | errors: (none)
[2025-06-03 22:28:40] 2025-06-04 02:28:27,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:28:40] 2025-06-04 02:28:27,885 | INFO     | pilot state: finished 
[2025-06-03 22:28:40] 2025-06-04 02:28:27,886 | INFO     | transexitcode: 0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,886 | INFO     | exeerrorcode: 0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,886 | INFO     | exeerrordiag: 
[2025-06-03 22:28:40] 2025-06-04 02:28:27,886 | INFO     | exitcode: 0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,886 | INFO     | exitmsg: OK
[2025-06-03 22:28:40] 2025-06-04 02:28:27,886 | INFO     | cpuconsumptiontime: 47835 s
[2025-06-03 22:28:40] 2025-06-04 02:28:27,886 | INFO     | nevents: 400
[2025-06-03 22:28:40] 2025-06-04 02:28:27,887 | INFO     | neventsw: 0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,887 | INFO     | pid: 11221
[2025-06-03 22:28:40] 2025-06-04 02:28:27,887 | INFO     | pgrp: 11221
[2025-06-03 22:28:40] 2025-06-04 02:28:27,887 | INFO     | corecount: 8
[2025-06-03 22:28:40] 2025-06-04 02:28:27,887 | INFO     | event service: False
[2025-06-03 22:28:40] 2025-06-04 02:28:27,887 | INFO     | sizes: {0: 2404356, 1: 2405212, 7: 2405418, 12: 2405446, 6524: 2432315, 6527: 2441284, 6530: 2441468, 6538: 2441638}
[2025-06-03 22:28:40] 2025-06-04 02:28:27,887 | INFO     | --------------------------------------------------
[2025-06-03 22:28:40] 2025-06-04 02:28:27,887 | INFO     | 
[2025-06-03 22:28:40] 2025-06-04 02:28:27,888 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 22:28:40] 2025-06-04 02:28:27,916 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,919 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:28:40] 2025-06-04 02:28:27,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:28:40] 2025-06-04 02:28:27,920 | INFO     | job 6678071463 has completed (purged errors)
[2025-06-03 22:28:40] 2025-06-04 02:28:27,920 | INFO     | overall cleanup function is called
[2025-06-03 22:28:40] 2025-06-04 02:28:28,928 | INFO     | --- collectZombieJob: --- 10, [11221]
[2025-06-03 22:28:40] 2025-06-04 02:28:28,928 | INFO     | zombie collector waiting for pid 11221
[2025-06-03 22:28:40] 2025-06-04 02:28:28,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:28:40] 2025-06-04 02:28:28,929 | INFO     | collected zombie processes
[2025-06-03 22:28:40] 2025-06-04 02:28:28,929 | INFO     | will attempt to kill all subprocesses of pid=11221
[2025-06-03 22:28:40] 2025-06-04 02:28:29,019 | INFO     | process IDs to be killed: [11221] (in reverse order)
[2025-06-03 22:28:40] 2025-06-04 02:28:29,076 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:28:40] 2025-06-04 02:28:29,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:28:40] 2025-06-04 02:28:29,079 | INFO     | did not find any defunct processes belonging to 11221
[2025-06-03 22:28:40] 2025-06-04 02:28:29,082 | INFO     | did not find any defunct processes belonging to 11221
[2025-06-03 22:28:40] 2025-06-04 02:28:29,082 | INFO     | ready for new job
[2025-06-03 22:28:40] 2025-06-04 02:28:29,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:28:40] 2025-06-04 02:28:29,084 | INFO     | **************************************
[2025-06-03 22:28:40] 2025-06-04 02:28:29,084 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:28:40] 2025-06-04 02:28:29,084 | INFO     | **************************************
[2025-06-03 22:28:40] 2025-06-04 02:28:29,084 | INFO     | 
[2025-06-03 22:28:40] 2025-06-04 02:28:29,085 | INFO     | architecture information:
[2025-06-03 22:28:40] 2025-06-04 02:28:29,085 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:28:40] 2025-06-04 02:28:29,103 | INFO     | cat /etc/os-release:
[2025-06-03 22:28:40] NAME="CentOS Linux"
[2025-06-03 22:28:40] VERSION="7 (Core)"
[2025-06-03 22:28:40] ID="centos"
[2025-06-03 22:28:40] ID_LIKE="rhel fedora"
[2025-06-03 22:28:40] VERSION_ID="7"
[2025-06-03 22:28:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:28:40] ANSI_COLOR="0;31"
[2025-06-03 22:28:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:28:40] HOME_URL="https://www.centos.org/"
[2025-06-03 22:28:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:28:40] 
[2025-06-03 22:28:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:28:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:28:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:28:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:28:40] 
[2025-06-03 22:28:40] 2025-06-04 02:28:29,104 | INFO     | **************************************
[2025-06-03 22:28:40] 2025-06-04 02:28:29,607 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 22:28:40] 2025-06-04 02:28:29,627 | INFO     | sufficient remaining disk space (18605932544 B)
[2025-06-03 22:28:40] 2025-06-04 02:28:29,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:28:40] 2025-06-04 02:28:29,628 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:28:40] 2025-06-04 02:28:29,628 | INFO     | update_server=False
[2025-06-03 22:28:40] 2025-06-04 02:28:29,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:28:40] 2025-06-04 02:28:29,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:28:40] 2025-06-04 02:28:29,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:28:40] 2025-06-04 02:28:29,629 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 22:28:40] 2025-06-04 02:28:29,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:28:40] 2025-06-04 02:28:29,630 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:28:40] 2025-06-04 02:28:29,631 | INFO     | aborting loop
[2025-06-03 22:28:40] 2025-06-04 02:28:29,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:28:40] 2025-06-04 02:28:29,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:28:40] 2025-06-04 02:28:29,936 | INFO     | all job control threads have been joined
[2025-06-03 22:28:40] 2025-06-04 02:28:30,130 | INFO     | all payload control threads have been joined
[2025-06-03 22:28:40] 2025-06-04 02:28:30,149 | INFO     | all data control threads have been joined
[2025-06-03 22:28:40] 2025-06-04 02:28:30,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:28:40] 2025-06-04 02:28:30,634 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:30,634 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:30,635 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:30,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:30,942 | INFO     | [job] control thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:31,135 | INFO     | [payload] control thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:31,155 | INFO     | [data] control thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:31,285 | INFO     | [job] validate thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:31,293 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:31,455 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:31,502 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:31,634 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:31,654 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:31,763 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:32,181 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:34,476 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:28:40] 2025-06-04 02:28:34,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616359167808)>', '<ExcThread(monitor, started 140615467652864)>']
[2025-06-03 22:28:40] 2025-06-04 02:28:35,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:28:40] 2025-06-04 02:28:35,663 | INFO     | [monitor] control thread has ended
[2025-06-03 22:28:40] 2025-06-04 02:28:39,981 | INFO     | all workflow threads have been joined
[2025-06-03 22:28:40] 2025-06-04 02:28:39,981 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:28:40] 2025-06-04 02:28:39,981 | INFO     | traces error code: 0
[2025-06-03 22:28:40] 2025-06-04 02:28:39,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:28:40] 2025-06-04 02:28:40,087 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:28:40] 2025-06-04 02:28:40,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:28:40] 2025-06-04 02:28:40,096 [wrapper] pilotpid: 4722
[2025-06-03 22:28:40] 2025-06-04 02:28:40,100 [wrapper] Pilot exit status: 0
[2025-06-03 22:28:40] 2025-06-04 02:28:40,119 [wrapper] pandaids: 6678071463
[2025-06-03 22:28:40] 2025-06-04 02:28:40,161 [wrapper] cleanup supervisor_pilot 25691 4723
[2025-06-03 22:28:40] 2025-06-04 02:28:40,166 [wrapper] Test setup, not cleaning
[2025-06-03 22:28:40] 2025-06-04 02:28:40,171 [wrapper] apfmon messages muted
[2025-06-03 22:28:40] 2025-06-04 02:28:40,175 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:28:40] 2025-06-04 02:28:40,180 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:28:40]  *** Error codes and diagnostics ***
[2025-06-03 22:28:40]     "exeErrorCode": 0,
[2025-06-03 22:28:40]     "exeErrorDiag": "",
[2025-06-03 22:28:40]     "pilotErrorCode": 0,
[2025-06-03 22:28:40]     "pilotErrorDiag": "",
[2025-06-03 22:28:40]  *** Listing of results directory ***
[2025-06-03 22:28:40] total 388760
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 16:36 pilot3.tar.gz
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 16:46 queuedata.json
[2025-06-03 22:28:40] -rwx------ 1 boincer umatlas     37140 Jun  3 16:47 runpilot2-wrapper.sh
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas       100 Jun  3 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:28:40] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 20:38 run_atlas
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas       105 Jun  3 20:38 job.xml
[2025-06-03 22:28:40] -rw-r--r-- 2 boincer umatlas 217423359 Jun  3 20:38 EVNT.45006593._001814.pool.root.1
[2025-06-03 22:28:40] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 20:38 start_atlas.sh
[2025-06-03 22:28:40] drwxrwx--x 2 boincer umatlas      4096 Jun  3 20:38 shared
[2025-06-03 22:28:40] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 20:38 input.tar.gz
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas         0 Jun  3 20:38 boinc_lockfile
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 20:38 pandaJob.out
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas    986069 Jun  3 20:39 agis_schedconf.cvmfs.json
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas   1603667 Jun  3 20:39 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:28:40] drwx------ 4 boincer umatlas      4096 Jun  3 20:39 pilot3
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas      5905 Jun  3 22:22 init_data.xml
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas 174956511 Jun  3 22:27 HITS.45006595._045232.pool.root.1
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas        95 Jun  3 22:27 pilot_heartbeat.json
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas       529 Jun  3 22:27 boinc_task_state.xml
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas      1050 Jun  3 22:28 memory_monitor_summary.json
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas    335125 Jun  3 22:28 log.45006595._045232.job.log.tgz.1
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas      7754 Jun  3 22:28 heartbeat.json
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 22:28 boinc_mmap_file
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas        27 Jun  3 22:28 wrapper_checkpoint.txt
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas      4476 Jun  3 22:28 pilotlog.txt
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas    605629 Jun  3 22:28 log.45006595._045232.job.log.1
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas       357 Jun  3 22:28 output.list
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas       620 Jun  3 22:28 runtime_log
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas    962560 Jun  3 22:28 result.tar.gz
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 22:28 runtime_log.err
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas       659 Jun  3 22:28 Ns4LDmPing7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT7lKDmHjtryn.diag
[2025-06-03 22:28:40] -rw-r--r-- 1 boincer umatlas     21102 Jun  3 22:28 stderr.txt
[2025-06-03 22:28:40] HITS file was successfully produced:
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas 174956511 Jun  3 22:27 shared/HITS.pool.root.1
[2025-06-03 22:28:40]  *** Contents of shared directory: ***
[2025-06-03 22:28:40] total 384644
[2025-06-03 22:28:40] -rw-r--r-- 2 boincer umatlas 217423359 Jun  3 20:38 ATLAS.root_0
[2025-06-03 22:28:40] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 20:38 start_atlas.sh
[2025-06-03 22:28:40] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 20:38 input.tar.gz
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas 174956511 Jun  3 22:27 HITS.pool.root.1
[2025-06-03 22:28:40] -rw------- 1 boincer umatlas    962560 Jun  3 22:28 result.tar.gz
22:28:42 (917): run_atlas exited; CPU time 47780.734831
22:28:42 (917): called boinc_finish(0)

</stderr_txt>
]]>

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