Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:34:52 (2404615): wrapper (7.7.26015): starting
20:34:52 (2404615): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 20:34:52] Arguments: --nthreads 10
[2025-06-03 20:34:52] Threads: 10
[2025-06-03 20:34:52] Checking for CVMFS
[2025-06-03 20:34:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:34:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:34:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:34:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:34:53] 2.12.6.0 709574 220045 311736 146762 1 66 31770670 32935937 12520 130560 1 368082334 99.640 358177729 26921 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 20:34:53] CVMFS is ok
[2025-06-03 20:34:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:34:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:34:53] Further information can be found at the LHC@home message board.
[2025-06-03 20:34:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:34:53] Checking for apptainer binary...
[2025-06-03 20:34:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:34:53] Running /usr/bin/apptainer --version
[2025-06-03 20:34:53] apptainer version 1.4.1-1.el9
[2025-06-03 20:34:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:34:53] c-5-6.aglt2.org
[2025-06-03 20:34:53] apptainer works
[2025-06-03 20:34:53] Set ATHENA_PROC_NUMBER=10
[2025-06-03 20:34:53] Set ATHENA_CORE_NUMBER=10
[2025-06-03 20:34:53] Starting ATLAS job with PandaID=6678152359
[2025-06-03 20:34:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:59:24]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:59:24]  guid=ef7b8d1a-176f-459d-a842-e7208284cc8e
[2025-06-03 21:59:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 21:59:24]  is_altstaged=None
[2025-06-03 21:59:24]  is_tar=False
[2025-06-03 21:59:24]  lfn=log.45006595._047136.job.log.tgz.1
[2025-06-03 21:59:24]  mtime=0
[2025-06-03 21:59:24]  protocol_id=None
[2025-06-03 21:59:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 21:59:24]  replicas=None
[2025-06-03 21:59:24]  scope=mc23_13p6TeV
[2025-06-03 21:59:24]  status=None
[2025-06-03 21:59:24]  status_code=0
[2025-06-03 21:59:24]  storage_token=
[2025-06-03 21:59:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678152359/log.45006595._047136.job.log.tgz.1
[2025-06-03 21:59:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/5b/log.45006595._047136.job.log.tgz.1
[2025-06-03 21:59:24]  workdir=None
[2025-06-03 21:59:24] ]
[2025-06-03 21:59:24] 2025-06-04 01:58:58,833 | INFO     | transferring file log.45006595._047136.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678152359/log.45006595._047136.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:59:24] 2025-06-04 01:58:58,833 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678152359/log.45006595._047136.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._047136.job
[2025-06-03 21:59:24] 2025-06-04 01:58:58,853 | INFO     | adding to output.list: log.45006595._047136.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/5b/log.45006595._047136.job.log.tg
[2025-06-03 21:59:24] 2025-06-04 01:58:58,854 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:59:24] 2025-06-04 01:58:58,854 | INFO     | summary of transferred files:
[2025-06-03 21:59:24] 2025-06-04 01:58:58,854 | INFO     |  -- lfn=log.45006595._047136.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:59:24] 2025-06-04 01:58:58,854 | INFO     | stage-out finished correctly
[2025-06-03 21:59:24] 2025-06-04 01:58:58,961 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:59:24] 2025-06-04 01:58:59,962 | INFO     | job 6678152359 has state=finished
[2025-06-03 21:59:24] 2025-06-04 01:58:59,962 | INFO     | preparing for final server update for job 6678152359 in state='finished'
[2025-06-03 21:59:24] 2025-06-04 01:58:59,962 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:59:24] 2025-06-04 01:58:59,963 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:59:24] 2025-06-04 01:58:59,963 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:59:24] 2025-06-04 01:58:59,963 | INFO     | job 6678152359 has finished - writing final server update
[2025-06-03 21:59:24] 2025-06-04 01:58:59,963 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:59:24] 2025-06-04 01:58:59,977 | INFO     | executing command: lscpu
[2025-06-03 21:59:24] 2025-06-04 01:59:00,032 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:59:24] 2025-06-04 01:59:01,969 | WARNING  | process 2415095 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 21:59:24] 2025-06-04 01:59:01,969 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678152359/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:59:24] 2025-06-04 01:59:02,338 | INFO     | number of running child processes to parent process 2415095: 1
[2025-06-03 21:59:24] 2025-06-04 01:59:02,339 | INFO     | maximum number of monitored processes: 6
[2025-06-03 21:59:24] 2025-06-04 01:59:04,100 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:59:24] 2025-06-04 01:59:04,100 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678152359/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:59:24] 2025-06-04 01:59:04,101 | INFO     | extracted standard info from prmon json
[2025-06-03 21:59:24] 2025-06-04 01:59:04,101 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:59:24] 2025-06-04 01:59:04,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:59:24] 2025-06-04 01:59:04,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:59:24] 2025-06-04 01:59:04,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:59:24] 2025-06-04 01:59:04,104 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:59:24] 2025-06-04 01:59:04,104 | INFO     | sum of square deviations: 130793150.0
[2025-06-03 21:59:24] 2025-06-04 01:59:04,105 | INFO     | sum of deviations: -3521173455.0
[2025-06-03 21:59:24] 2025-06-04 01:59:04,105 | INFO     | mean x: 1748999894.0
[2025-06-03 21:59:24] 2025-06-04 01:59:04,105 | INFO     | mean y: 2460610.6
[2025-06-03 21:59:24] 2025-06-04 01:59:04,105 | INFO     | -- intersect: 47088504486.37341
[2025-06-03 21:59:24] 2025-06-04 01:59:04,105 | INFO     | intersect: 47088504486.37341
[2025-06-03 21:59:24] 2025-06-04 01:59:04,105 | INFO     | chi2: 1.1227882633554886
[2025-06-03 21:59:24] 2025-06-04 01:59:04,106 | INFO     | -- intersect: 47088504486.37341
[2025-06-03 21:59:24] 2025-06-04 01:59:04,106 | INFO     | current memory leak: -26.92 B/s (using 75 data points, chi2=1.12)
[2025-06-03 21:59:24] 2025-06-04 01:59:04,106 | INFO     | ..............................
[2025-06-03 21:59:24] 2025-06-04 01:59:04,106 | INFO     | . Timing measurements:
[2025-06-03 21:59:24] 2025-06-04 01:59:04,107 | INFO     | . get job = 0 s
[2025-06-03 21:59:24] 2025-06-04 01:59:04,107 | INFO     | . initial setup = 2 s
[2025-06-03 21:59:24] 2025-06-04 01:59:04,107 | INFO     | . payload setup = 7 s
[2025-06-03 21:59:24] 2025-06-04 01:59:04,107 | INFO     | . stage-in = 0 s
[2025-06-03 21:59:24] 2025-06-04 01:59:04,107 | INFO     | . payload execution = 5005 s
[2025-06-03 21:59:24] 2025-06-04 01:59:04,107 | INFO     | . stage-out = 0 s
[2025-06-03 21:59:24] 2025-06-04 01:59:04,107 | INFO     | . log creation = 0 s
[2025-06-03 21:59:24] 2025-06-04 01:59:04,107 | INFO     | ..............................
[2025-06-03 21:59:24] 2025-06-04 01:59:04,690 | INFO     | 
[2025-06-03 21:59:24] 2025-06-04 01:59:04,690 | INFO     | job summary report
[2025-06-03 21:59:24] 2025-06-04 01:59:04,690 | INFO     | --------------------------------------------------
[2025-06-03 21:59:24] 2025-06-04 01:59:04,690 | INFO     | PanDA job id: 6678152359
[2025-06-03 21:59:24] 2025-06-04 01:59:04,690 | INFO     | task id: 45006595
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | errors: (none)
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | pilot state: finished 
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | transexitcode: 0
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | exeerrorcode: 0
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | exeerrordiag: 
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | exitcode: 0
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | exitmsg: OK
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | cpuconsumptiontime: 41788 s
[2025-06-03 21:59:24] 2025-06-04 01:59:04,691 | INFO     | nevents: 400
[2025-06-03 21:59:24] 2025-06-04 01:59:04,692 | INFO     | neventsw: 0
[2025-06-03 21:59:24] 2025-06-04 01:59:04,692 | INFO     | pid: 2415095
[2025-06-03 21:59:24] 2025-06-04 01:59:04,692 | INFO     | pgrp: 2415095
[2025-06-03 21:59:24] 2025-06-04 01:59:04,692 | INFO     | corecount: 10
[2025-06-03 21:59:24] 2025-06-04 01:59:04,692 | INFO     | event service: False
[2025-06-03 21:59:24] 2025-06-04 01:59:04,692 | INFO     | sizes: {0: 2404354, 1: 2405210, 5: 2405416, 12: 2405472, 5016: 2431525, 5019: 2440650, 5024: 2440764}
[2025-06-03 21:59:24] 2025-06-04 01:59:04,692 | INFO     | --------------------------------------------------
[2025-06-03 21:59:24] 2025-06-04 01:59:04,692 | INFO     | 
[2025-06-03 21:59:24] 2025-06-04 01:59:04,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 21:59:24] 2025-06-04 01:59:04,712 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,713 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:59:24] 2025-06-04 01:59:04,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,715 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:59:24] 2025-06-04 01:59:04,715 | INFO     | job 6678152359 has completed (purged errors)
[2025-06-03 21:59:24] 2025-06-04 01:59:04,715 | INFO     | overall cleanup function is called
[2025-06-03 21:59:24] 2025-06-04 01:59:05,724 | INFO     | --- collectZombieJob: --- 10, [2415095]
[2025-06-03 21:59:24] 2025-06-04 01:59:05,724 | INFO     | zombie collector waiting for pid 2415095
[2025-06-03 21:59:24] 2025-06-04 01:59:05,724 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:59:24] 2025-06-04 01:59:05,724 | INFO     | collected zombie processes
[2025-06-03 21:59:24] 2025-06-04 01:59:05,725 | INFO     | will attempt to kill all subprocesses of pid=2415095
[2025-06-03 21:59:24] 2025-06-04 01:59:06,088 | INFO     | process IDs to be killed: [2415095] (in reverse order)
[2025-06-03 21:59:24] 2025-06-04 01:59:06,192 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:59:24] 2025-06-04 01:59:06,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:59:24] 2025-06-04 01:59:06,205 | INFO     | did not find any defunct processes belonging to 2415095
[2025-06-03 21:59:24] 2025-06-04 01:59:06,218 | INFO     | did not find any defunct processes belonging to 2415095
[2025-06-03 21:59:24] 2025-06-04 01:59:06,219 | INFO     | ready for new job
[2025-06-03 21:59:24] 2025-06-04 01:59:06,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:59:24] 2025-06-04 01:59:06,221 | INFO     | **************************************
[2025-06-03 21:59:24] 2025-06-04 01:59:06,221 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:59:24] 2025-06-04 01:59:06,222 | INFO     | **************************************
[2025-06-03 21:59:24] 2025-06-04 01:59:06,222 | INFO     | 
[2025-06-03 21:59:24] 2025-06-04 01:59:06,236 | INFO     | architecture information:
[2025-06-03 21:59:24] 2025-06-04 01:59:06,236 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:59:24] 2025-06-04 01:59:06,250 | INFO     | cat /etc/os-release:
[2025-06-03 21:59:24] NAME="CentOS Linux"
[2025-06-03 21:59:24] VERSION="7 (Core)"
[2025-06-03 21:59:24] ID="centos"
[2025-06-03 21:59:24] ID_LIKE="rhel fedora"
[2025-06-03 21:59:24] VERSION_ID="7"
[2025-06-03 21:59:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:59:24] ANSI_COLOR="0;31"
[2025-06-03 21:59:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:59:24] HOME_URL="https://www.centos.org/"
[2025-06-03 21:59:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:59:24] 
[2025-06-03 21:59:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:59:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:59:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:59:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:59:24] 
[2025-06-03 21:59:24] 2025-06-04 01:59:06,251 | INFO     | **************************************
[2025-06-03 21:59:24] 2025-06-04 01:59:06,753 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 21:59:24] 2025-06-04 01:59:06,771 | INFO     | sufficient remaining disk space (76529270784 B)
[2025-06-03 21:59:24] 2025-06-04 01:59:06,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:59:24] 2025-06-04 01:59:06,771 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:59:24] 2025-06-04 01:59:06,772 | INFO     | update_server=False
[2025-06-03 21:59:24] 2025-06-04 01:59:06,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:59:24] 2025-06-04 01:59:06,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:59:24] 2025-06-04 01:59:06,773 | INFO     | aborting loop
[2025-06-03 21:59:24] 2025-06-04 01:59:06,921 | INFO     | PID=2408234 has CPU usage=16.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 21:59:24] 2025-06-04 01:59:06,922 | INFO     | .. there are 25 such processes running
[2025-06-03 21:59:24] 2025-06-04 01:59:06,922 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:59:24] 2025-06-04 01:59:06,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:59:24] 2025-06-04 01:59:06,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:59:24] 2025-06-04 01:59:06,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:59:24] 2025-06-04 01:59:07,609 | INFO     | all data control threads have been joined
[2025-06-03 21:59:24] 2025-06-04 01:59:07,655 | INFO     | all payload control threads have been joined
[2025-06-03 21:59:24] 2025-06-04 01:59:07,773 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:07,778 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:07,864 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:08,052 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:08,057 | INFO     | all job control threads have been joined
[2025-06-03 21:59:24] 2025-06-04 01:59:08,581 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:08,613 | INFO     | [data] control thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:08,660 | INFO     | [payload] control thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:08,780 | INFO     | [job] validate thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:08,868 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:08,882 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:08,941 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:08,976 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:09,063 | INFO     | [job] control thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:09,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:59:24] 2025-06-04 01:59:09,576 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:59:24] 2025-06-04 01:59:10,232 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:13,581 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:17,205 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:59:24] 2025-06-04 01:59:18,210 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:59:24] 2025-06-04 01:59:19,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140170858927936)>', '<ExcThread(monitor, started 140170502313728)>']
[2025-06-03 21:59:24] 2025-06-04 01:59:19,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:59:24] 2025-06-04 01:59:19,986 | INFO     | [monitor] control thread has ended
[2025-06-03 21:59:24] 2025-06-04 01:59:24,274 | INFO     | all workflow threads have been joined
[2025-06-03 21:59:24] 2025-06-04 01:59:24,274 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:59:24] 2025-06-04 01:59:24,274 | INFO     | traces error code: 0
[2025-06-03 21:59:24] 2025-06-04 01:59:24,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:59:24] 2025-06-04 01:59:24,430 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:59:24] 2025-06-04 01:59:24,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:59:24] 2025-06-04 01:59:24,435 [wrapper] pilotpid: 2408234
[2025-06-03 21:59:24] 2025-06-04 01:59:24,437 [wrapper] Pilot exit status: 0
[2025-06-03 21:59:24] 2025-06-04 01:59:24,446 [wrapper] pandaids: 6678152359
[2025-06-03 21:59:24] 2025-06-04 01:59:24,508 [wrapper] cleanup supervisor_pilot 2695872 2408235
[2025-06-03 21:59:24] 2025-06-04 01:59:24,512 [wrapper] Test setup, not cleaning
[2025-06-03 21:59:24] 2025-06-04 01:59:24,515 [wrapper] apfmon messages muted
[2025-06-03 21:59:24] 2025-06-04 01:59:24,517 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:59:24] 2025-06-04 01:59:24,520 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:59:24]  *** Error codes and diagnostics ***
[2025-06-03 21:59:24]     "exeErrorCode": 0,
[2025-06-03 21:59:24]     "exeErrorDiag": "",
[2025-06-03 21:59:24]     "pilotErrorCode": 0,
[2025-06-03 21:59:24]     "pilotErrorDiag": "",
[2025-06-03 21:59:24]  *** Listing of results directory ***
[2025-06-03 21:59:24] total 382960
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 17:57 pilot3.tar.gz
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 18:33 queuedata.json
[2025-06-03 21:59:24] -rwx------. 1 boincer umatlas     37140 Jun  3 18:33 runpilot2-wrapper.sh
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas       100 Jun  3 20:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:59:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 20:34 run_atlas
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas       105 Jun  3 20:34 job.xml
[2025-06-03 21:59:24] -rw-r--r--. 2 boincer umatlas 213430232 Jun  3 20:34 EVNT.45006593._001890.pool.root.1
[2025-06-03 21:59:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:34 start_atlas.sh
[2025-06-03 21:59:24] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 20:34 shared
[2025-06-03 21:59:24] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 20:34 input.tar.gz
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas         0 Jun  3 20:34 boinc_lockfile
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 20:34 pandaJob.out
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas    986069 Jun  3 20:35 agis_schedconf.cvmfs.json
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas   1603667 Jun  3 20:35 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:59:24] drwx------. 4 boincer umatlas      4096 Jun  3 20:35 pilot3
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas      6671 Jun  3 21:55 init_data.xml
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas 173255285 Jun  3 21:58 HITS.45006595._047136.pool.root.1
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas       529 Jun  3 21:58 boinc_task_state.xml
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas      1034 Jun  3 21:58 memory_monitor_summary.json
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas        95 Jun  3 21:58 pilot_heartbeat.json
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas    329838 Jun  3 21:58 log.45006595._047136.job.log.tgz.1
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas      7710 Jun  3 21:59 heartbeat.json
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:59 boinc_mmap_file
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas        27 Jun  3 21:59 wrapper_checkpoint.txt
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas      4821 Jun  3 21:59 pilotlog.txt
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas    486869 Jun  3 21:59 log.45006595._047136.job.log.1
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas       357 Jun  3 21:59 output.list
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:59 runtime_log
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas    839680 Jun  3 21:59 result.tar.gz
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas      8646 Jun  3 21:59 runtime_log.err
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas       649 Jun  3 21:59 KIoLDmMNpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwMmKDmxYpGkn.diag
[2025-06-03 21:59:24] -rw-r--r--. 1 boincer umatlas     21340 Jun  3 21:59 stderr.txt
[2025-06-03 21:59:24] HITS file was successfully produced:
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas 173255285 Jun  3 21:58 shared/HITS.pool.root.1
[2025-06-03 21:59:24]  *** Contents of shared directory: ***
[2025-06-03 21:59:24] total 378964
[2025-06-03 21:59:24] -rw-r--r--. 2 boincer umatlas 213430232 Jun  3 20:34 ATLAS.root_0
[2025-06-03 21:59:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:34 start_atlas.sh
[2025-06-03 21:59:24] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 20:34 input.tar.gz
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas 173255285 Jun  3 21:58 HITS.pool.root.1
[2025-06-03 21:59:24] -rw-------. 1 boincer umatlas    839680 Jun  3 21:59 result.tar.gz
21:59:26 (2404615): run_atlas exited; CPU time 41890.804409
21:59:26 (2404615): called boinc_finish(0)

</stderr_txt>
]]>

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