Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:38:05 (21565): wrapper (7.7.26015): starting
10:38:05 (21565): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:38:05] Arguments: --nthreads 8
[2025-06-04 10:38:05] Threads: 8
[2025-06-04 10:38:05] Checking for CVMFS
[2025-06-04 10:38:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:38:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:38:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:38:08] 2.11.2.0 1205 32966 91068 146773 2 104 19709004 25165824 2357 130560 0 16810844 99.796 18952212 2197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:38:08] CVMFS is ok
[2025-06-04 10:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:38:08] Checking for apptainer binary...
[2025-06-04 10:38:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:38:08] Running /usr/bin/apptainer --version
[2025-06-04 10:38:08] apptainer version 1.3.2-1.el7
[2025-06-04 10:38:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:39:39] cg-vwn325.simple-grid.lan
[2025-06-04 10:39:39] apptainer works
[2025-06-04 10:39:39] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:39:39] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:39:39] Starting ATLAS job with PandaID=6677975792
[2025-06-04 10:39:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:41:35]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:41:35] 2025-06-04 12:39:22,641 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6677975792/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:41:35] 2025-06-04 12:39:22,641 | INFO     | extracted standard info from prmon json
[2025-06-04 14:41:35] 2025-06-04 12:39:22,641 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:41:35] 2025-06-04 12:39:22,642 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:41:35] 2025-06-04 12:39:22,642 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:41:35] 2025-06-04 12:39:22,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:41:35] 2025-06-04 12:39:22,647 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:41:35] 2025-06-04 12:39:22,648 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 14:41:35] 2025-06-04 12:39:22,650 | INFO     | sum of deviations: -8336679832.500002
[2025-06-04 14:41:35] 2025-06-04 12:39:22,650 | INFO     | mean x: 1749033757.5
[2025-06-04 14:41:35] 2025-06-04 12:39:22,651 | INFO     | mean y: 2483081.1725663715
[2025-06-04 14:41:35] 2025-06-04 12:39:22,651 | INFO     | -- intersect: 4076249052.8616695
[2025-06-04 14:41:35] 2025-06-04 12:39:22,651 | INFO     | intersect: 4076249052.8616695
[2025-06-04 14:41:35] 2025-06-04 12:39:22,651 | INFO     | chi2: 2.796633125629805
[2025-06-04 14:41:35] 2025-06-04 12:39:22,652 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,654 | INFO     | sum of deviations: 6791357347.000001
[2025-06-04 14:41:35] 2025-06-04 12:39:22,654 | INFO     | mean x: 1749033605.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,654 | INFO     | mean y: 2492835.1674208143
[2025-06-04 14:41:35] 2025-06-04 12:39:22,654 | INFO     | -- intersect: -3546526649.219211
[2025-06-04 14:41:35] 2025-06-04 12:39:22,654 | INFO     | intersect: -3546526649.219211
[2025-06-04 14:41:35] 2025-06-04 12:39:22,655 | INFO     | chi2: 2.0321045644238396
[2025-06-04 14:41:35] 2025-06-04 12:39:22,655 | INFO     | current chi2=2.0321045644238396 (change=27.337463544982967 %)
[2025-06-04 14:41:35] 2025-06-04 12:39:22,655 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,657 | INFO     | sum of deviations: 6779016010.000008
[2025-06-04 14:41:35] 2025-06-04 12:39:22,657 | INFO     | mean x: 1749033452.5
[2025-06-04 14:41:35] 2025-06-04 12:39:22,657 | INFO     | mean y: 2492826.7314814813
[2025-06-04 14:41:35] 2025-06-04 12:39:22,658 | INFO     | -- intersect: -3791831119.467661
[2025-06-04 14:41:35] 2025-06-04 12:39:22,658 | INFO     | intersect: -3791831119.467661
[2025-06-04 14:41:35] 2025-06-04 12:39:22,658 | INFO     | chi2: 2.032915976284633
[2025-06-04 14:41:35] 2025-06-04 12:39:22,658 | INFO     | current chi2=2.032915976284633 (change=-0.03992963132896884 %)
[2025-06-04 14:41:35] 2025-06-04 12:39:22,658 | INFO     | right removable region: 215
[2025-06-04 14:41:35] 2025-06-04 12:39:22,659 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,661 | INFO     | sum of deviations: -51039030315.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,661 | INFO     | mean x: 1749033910.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,661 | INFO     | mean y: 2510892.076923077
[2025-06-04 14:41:35] 2025-06-04 12:39:22,661 | INFO     | -- intersect: 26674431597.213894
[2025-06-04 14:41:35] 2025-06-04 12:39:22,661 | INFO     | intersect: 26674431597.213894
[2025-06-04 14:41:35] 2025-06-04 12:39:22,662 | INFO     | chi2: 0.9612746266413035
[2025-06-04 14:41:35] 2025-06-04 12:39:22,662 | INFO     | current chi2=0.9612746266413035 (change=65.62743186327583 %)
[2025-06-04 14:41:35] 2025-06-04 12:39:22,662 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,664 | INFO     | sum of deviations: -46678600926.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,664 | INFO     | mean x: 1749034062.5
[2025-06-04 14:41:35] 2025-06-04 12:39:22,664 | INFO     | mean y: 2507870.546296296
[2025-06-04 14:41:35] 2025-06-04 12:39:22,664 | INFO     | -- intersect: 26129278301.27418
[2025-06-04 14:41:35] 2025-06-04 12:39:22,665 | INFO     | intersect: 26129278301.27418
[2025-06-04 14:41:35] 2025-06-04 12:39:22,665 | INFO     | chi2: 0.9498927439405254
[2025-06-04 14:41:35] 2025-06-04 12:39:22,665 | INFO     | current chi2=0.9498927439405254 (change=1.1840406877841398 %)
[2025-06-04 14:41:35] 2025-06-04 12:39:22,665 | INFO     | left removable region: 20
[2025-06-04 14:41:35] 2025-06-04 12:39:22,666 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,667 | INFO     | sum of deviations: -16724381346.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,667 | INFO     | mean x: 1749034032.0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,667 | INFO     | mean y: 2508179.7538461536
[2025-06-04 14:41:35] 2025-06-04 12:39:22,668 | INFO     | -- intersect: 12725155398.083862
[2025-06-04 14:41:35] 2025-06-04 12:39:22,668 | INFO     | intersect: 12725155398.083862
[2025-06-04 14:41:35] 2025-06-04 12:39:22,668 | INFO     | chi2: 0.11491030279726558
[2025-06-04 14:41:35] 2025-06-04 12:39:22,668 | INFO     | -- intersect: 12725155398.083862
[2025-06-04 14:41:35] 2025-06-04 12:39:22,668 | INFO     | current memory leak: -7.27 B/s (using 195 data points, chi2=0.11)
[2025-06-04 14:41:35] 2025-06-04 12:39:22,669 | INFO     | ..............................
[2025-06-04 14:41:35] 2025-06-04 12:39:22,669 | INFO     | . Timing measurements:
[2025-06-04 14:41:35] 2025-06-04 12:39:22,669 | INFO     | . get job = 0 s
[2025-06-04 14:41:35] 2025-06-04 12:39:22,670 | INFO     | . initial setup = 10 s
[2025-06-04 14:41:35] 2025-06-04 12:39:22,670 | INFO     | . payload setup = 107 s
[2025-06-04 14:41:35] 2025-06-04 12:39:22,670 | INFO     | . stage-in = 0 s
[2025-06-04 14:41:35] 2025-06-04 12:39:22,670 | INFO     | . payload execution = 13818 s
[2025-06-04 14:41:35] 2025-06-04 12:39:22,670 | INFO     | . stage-out = 4 s
[2025-06-04 14:41:35] 2025-06-04 12:39:22,670 | INFO     | . log creation = 1 s
[2025-06-04 14:41:35] 2025-06-04 12:39:22,670 | INFO     | ..............................
[2025-06-04 14:41:35] 2025-06-04 12:39:22,809 | INFO     | 
[2025-06-04 14:41:35] 2025-06-04 12:39:22,810 | INFO     | job summary report
[2025-06-04 14:41:35] 2025-06-04 12:39:22,810 | INFO     | --------------------------------------------------
[2025-06-04 14:41:35] 2025-06-04 12:39:22,810 | INFO     | PanDA job id: 6677975792
[2025-06-04 14:41:35] 2025-06-04 12:39:22,810 | INFO     | task id: 45006595
[2025-06-04 14:41:35] 2025-06-04 12:39:22,810 | INFO     | errors: (none)
[2025-06-04 14:41:35] 2025-06-04 12:39:22,810 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:41:35] 2025-06-04 12:39:22,810 | INFO     | pilot state: finished 
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | transexitcode: 0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | exeerrorcode: 0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | exeerrordiag: 
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | exitcode: 0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | exitmsg: OK
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | cpuconsumptiontime: 51131 s
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | nevents: 400
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | neventsw: 0
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | pid: 3568
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | pgrp: 3568
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | corecount: 8
[2025-06-04 14:41:35] 2025-06-04 12:39:22,811 | INFO     | event service: False
[2025-06-04 14:41:35] 2025-06-04 12:39:22,812 | INFO     | sizes: {0: 2404958, 1: 2405213, 2: 2405213, 12: 2405241, 23: 2405269, 34: 2405297, 45: 2405453, 55: 2405481, 66: 2405509, 77: 2405537, 86: 2405799, 87: 2406107, 13
[2025-06-04 14:41:35] 2025-06-04 12:39:22,812 | INFO     | --------------------------------------------------
[2025-06-04 14:41:35] 2025-06-04 12:39:22,812 | INFO     | 
[2025-06-04 14:41:35] 2025-06-04 12:39:22,812 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-04 14:41:35] 2025-06-04 12:39:22,964 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,964 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,964 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,964 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,966 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,966 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:41:35] 2025-06-04 12:39:22,966 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,966 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:41:35] 2025-06-04 12:39:22,966 | INFO     | job 6677975792 has completed (purged errors)
[2025-06-04 14:41:35] 2025-06-04 12:39:22,966 | INFO     | overall cleanup function is called
[2025-06-04 14:41:35] 2025-06-04 12:39:23,979 | INFO     | --- collectZombieJob: --- 10, [3568]
[2025-06-04 14:41:35] 2025-06-04 12:39:23,979 | INFO     | zombie collector waiting for pid 3568
[2025-06-04 14:41:35] 2025-06-04 12:39:23,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:41:35] 2025-06-04 12:39:23,980 | INFO     | collected zombie processes
[2025-06-04 14:41:35] 2025-06-04 12:39:23,980 | INFO     | will attempt to kill all subprocesses of pid=3568
[2025-06-04 14:41:35] 2025-06-04 12:39:24,150 | INFO     | process IDs to be killed: [3568] (in reverse order)
[2025-06-04 14:41:35] 2025-06-04 12:39:25,172 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:41:35] 2025-06-04 12:39:25,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:41:35] 2025-06-04 12:39:25,176 | INFO     | did not find any defunct processes belonging to 3568
[2025-06-04 14:41:35] 2025-06-04 12:39:25,179 | INFO     | did not find any defunct processes belonging to 3568
[2025-06-04 14:41:35] 2025-06-04 12:39:25,179 | INFO     | ready for new job
[2025-06-04 14:41:35] 2025-06-04 12:39:25,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:41:35] 2025-06-04 12:39:25,182 | INFO     | **************************************
[2025-06-04 14:41:35] 2025-06-04 12:39:25,182 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:41:35] 2025-06-04 12:39:25,182 | INFO     | **************************************
[2025-06-04 14:41:35] 2025-06-04 12:39:25,182 | INFO     | 
[2025-06-04 14:41:35] 2025-06-04 12:39:25,183 | INFO     | pilot is running in a VM
[2025-06-04 14:41:35] 2025-06-04 12:39:25,183 | INFO     | architecture information:
[2025-06-04 14:41:35] 2025-06-04 12:39:25,191 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:41:35] 2025-06-04 12:39:25,385 | INFO     | cat /etc/os-release:
[2025-06-04 14:41:35] NAME="CentOS Linux"
[2025-06-04 14:41:35] VERSION="7 (Core)"
[2025-06-04 14:41:35] ID="centos"
[2025-06-04 14:41:35] ID_LIKE="rhel fedora"
[2025-06-04 14:41:35] VERSION_ID="7"
[2025-06-04 14:41:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:41:35] ANSI_COLOR="0;31"
[2025-06-04 14:41:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:41:35] HOME_URL="https://www.centos.org/"
[2025-06-04 14:41:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:41:35] 
[2025-06-04 14:41:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:41:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:41:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:41:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:41:35] 
[2025-06-04 14:41:35] 2025-06-04 12:39:25,385 | INFO     | **************************************
[2025-06-04 14:41:35] 2025-06-04 12:39:25,888 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-04 14:41:35] 2025-06-04 12:39:26,057 | INFO     | sufficient remaining disk space (497287168000 B)
[2025-06-04 14:41:35] 2025-06-04 12:39:26,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:41:35] 2025-06-04 12:39:26,057 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:41:35] 2025-06-04 12:39:26,057 | INFO     | update_server=False
[2025-06-04 14:41:35] 2025-06-04 12:39:26,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:41:35] 2025-06-04 12:39:26,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:41:35] 2025-06-04 12:39:26,062 | INFO     | aborting loop
[2025-06-04 14:41:35] 2025-06-04 12:39:26,351 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:41:35] 2025-06-04 12:39:26,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:41:35] 2025-06-04 12:39:26,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:41:35] 2025-06-04 12:39:26,377 | INFO     | all data control threads have been joined
[2025-06-04 14:41:35] 2025-06-04 12:39:26,484 | INFO     | all payload control threads have been joined
[2025-06-04 14:41:35] 2025-06-04 12:39:26,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:41:35] 2025-06-04 12:39:26,565 | INFO     | all job control threads have been joined
[2025-06-04 14:41:35] 2025-06-04 12:39:27,063 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,069 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,072 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,073 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,331 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,383 | INFO     | [data] control thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,490 | INFO     | [payload] control thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,570 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,571 | INFO     | [job] control thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,760 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:41:35] 2025-06-04 12:39:27,857 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:27,989 | INFO     | [job] validate thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:28,515 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:28,543 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:28,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:41:35] 2025-06-04 12:39:28,831 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:32,719 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:41:35] 2025-06-04 12:39:34,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062637164352)>', '<ExcThread(monitor, started 140061769201408)>']
[2025-06-04 14:41:35] 2025-06-04 12:39:35,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:41:35] 2025-06-04 12:39:35,405 | INFO     | [monitor] control thread has ended
[2025-06-04 14:41:35] 2025-06-04 12:39:39,565 | INFO     | all workflow threads have been joined
[2025-06-04 14:41:35] 2025-06-04 12:39:39,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:41:35] 2025-06-04 12:39:39,566 | INFO     | traces error code: 0
[2025-06-04 14:41:35] 2025-06-04 12:39:39,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:41:35] 2025-06-04 12:39:39,904 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:41:35] 2025-06-04 12:39:40,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:41:35] 2025-06-04 12:39:40,127 [wrapper] pilotpid: 25309
[2025-06-04 14:41:35] 2025-06-04 12:39:40,224 [wrapper] Pilot exit status: 0
[2025-06-04 14:41:35] 2025-06-04 12:39:40,789 [wrapper] pandaids: 6677975792
[2025-06-04 14:41:35] 2025-06-04 12:39:41,460 [wrapper] cleanup supervisor_pilot 17445 25310
[2025-06-04 14:41:35] 2025-06-04 12:39:41,544 [wrapper] Test setup, not cleaning
[2025-06-04 14:41:35] 2025-06-04 12:39:41,594 [wrapper] apfmon messages muted
[2025-06-04 14:41:35] 2025-06-04 12:39:41,701 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:41:35] 2025-06-04 12:39:41,795 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:41:35]  *** Error codes and diagnostics ***
[2025-06-04 14:41:35]     "exeErrorCode": 0,
[2025-06-04 14:41:35]     "exeErrorDiag": "",
[2025-06-04 14:41:35]     "pilotErrorCode": 0,
[2025-06-04 14:41:35]     "pilotErrorDiag": "",
[2025-06-04 14:41:35]  *** Listing of results directory ***
[2025-06-04 14:41:35] total 391256
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:58 queuedata.json
[2025-06-04 14:41:35] -rwx------. 1 boinc boinc     37140 Jun  3 21:00 runpilot2-wrapper.sh
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:41:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:38 run_atlas
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:38 job.xml
[2025-06-04 14:41:35] -rw-r--r--. 2 boinc boinc 213274933 Jun  4 10:38 EVNT.45006593._001718.pool.root.1
[2025-06-04 14:41:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:38 start_atlas.sh
[2025-06-04 14:41:35] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:38 shared
[2025-06-04 14:41:35] -rw-r--r--. 2 boinc boinc    508881 Jun  4 10:38 input.tar.gz
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc      6392 Jun  4 10:38 init_data.xml
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:38 boinc_lockfile
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:39 pandaJob.out
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc    986774 Jun  4 10:42 agis_schedconf.cvmfs.json
[2025-06-04 14:41:35] drwx------. 4 boinc boinc      4096 Jun  4 10:42 pilot3
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc 180359150 Jun  4 14:36 HITS.45006595._042883.pool.root.1
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:36 boinc_task_state.xml
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc      1017 Jun  4 14:37 memory_monitor_summary.json
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc   1598969 Jun  4 14:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc    384730 Jun  4 14:37 log.45006595._042883.job.log.tgz.1
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc        95 Jun  4 14:39 pilot_heartbeat.json
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc      7688 Jun  4 14:39 heartbeat.json
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc      4417 Jun  4 14:39 pilotlog.txt
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc   1215728 Jun  4 14:39 log.45006595._042883.job.log.1
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc       357 Jun  4 14:39 output.list
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:39 runtime_log
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc   1617920 Jun  4 14:39 result.tar.gz
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc      8673 Jun  4 14:39 runtime_log.err
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc       656 Jun  4 14:39 0VvKDmr2lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmznlKDmhj40Tn.diag
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:41 boinc_mmap_file
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:41 wrapper_checkpoint.txt
[2025-06-04 14:41:35] -rw-r--r--. 1 boinc boinc     20527 Jun  4 14:41 stderr.txt
[2025-06-04 14:41:35] HITS file was successfully produced:
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc 180359150 Jun  4 14:36 shared/HITS.pool.root.1
[2025-06-04 14:41:35]  *** Contents of shared directory: ***
[2025-06-04 14:41:35] total 386508
[2025-06-04 14:41:35] -rw-r--r--. 2 boinc boinc 213274933 Jun  4 10:38 ATLAS.root_0
[2025-06-04 14:41:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:38 start_atlas.sh
[2025-06-04 14:41:35] -rw-r--r--. 2 boinc boinc    508881 Jun  4 10:38 input.tar.gz
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc 180359150 Jun  4 14:36 HITS.pool.root.1
[2025-06-04 14:41:35] -rw-------. 1 boinc boinc   1617920 Jun  4 14:39 result.tar.gz
14:41:37 (21565): run_atlas exited; CPU time 51327.977257
14:41:37 (21565): called boinc_finish(0)

</stderr_txt>
]]>

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