Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:47:35 (7844): wrapper (7.7.26015): starting
15:47:35 (7844): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:47:35] Arguments: --nthreads 8
[2025-06-04 15:47:35] Threads: 8
[2025-06-04 15:47:35] Checking for CVMFS
[2025-06-04 15:47:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:47:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:47:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:47:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:47:36] 2.11.2.0 17834 33306 88612 146781 1 159 20257894 25165824 3245 130560 0 18398828 99.804 20383077 2141 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 15:47:36] CVMFS is ok
[2025-06-04 15:47:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:47:36] Checking for apptainer binary...
[2025-06-04 15:47:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:47:36] Running /usr/bin/apptainer --version
[2025-06-04 15:47:36] apptainer version 1.3.2-1.el7
[2025-06-04 15:47:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:47:37] cg-vwn466.simple-grid.lan
[2025-06-04 15:47:37] apptainer works
[2025-06-04 15:47:37] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:47:37] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:47:37] Starting ATLAS job with PandaID=6678152236
[2025-06-04 15:47:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:38:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:38:19] 2025-06-04 17:01:42,409 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:38:19] 2025-06-04 17:01:42,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:38:19] 2025-06-04 17:01:42,409 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:38:19] 2025-06-04 17:01:42,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:38:19] 2025-06-04 17:01:42,413 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:38:19] 2025-06-04 17:01:42,414 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,415 | INFO     | sum of deviations: -24401966701.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,416 | INFO     | mean x: 1749050644.5
[2025-06-04 20:38:19] 2025-06-04 17:01:42,416 | INFO     | mean y: 2508018.734042553
[2025-06-04 20:38:19] 2025-06-04 17:01:42,416 | INFO     | -- intersect: 20717631719.61986
[2025-06-04 20:38:19] 2025-06-04 17:01:42,416 | INFO     | intersect: 20717631719.61986
[2025-06-04 20:38:19] 2025-06-04 17:01:42,416 | INFO     | chi2: 2.596369054711695
[2025-06-04 20:38:19] 2025-06-04 17:01:42,416 | INFO     | sum of square deviations: 1900284932.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,418 | INFO     | sum of deviations: -11160331981.999996
[2025-06-04 20:38:19] 2025-06-04 17:01:42,418 | INFO     | mean x: 1749050492.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,418 | INFO     | mean y: 2520380.5519125685
[2025-06-04 20:38:19] 2025-06-04 17:01:42,418 | INFO     | -- intersect: 10274655793.137728
[2025-06-04 20:38:19] 2025-06-04 17:01:42,418 | INFO     | intersect: 10274655793.137728
[2025-06-04 20:38:19] 2025-06-04 17:01:42,419 | INFO     | chi2: 1.8290577523017213
[2025-06-04 20:38:19] 2025-06-04 17:01:42,419 | INFO     | current chi2=1.8290577523017213 (change=29.553244790740163 %)
[2025-06-04 20:38:19] 2025-06-04 17:01:42,419 | INFO     | sum of square deviations: 1748737904.5
[2025-06-04 20:38:19] 2025-06-04 17:01:42,420 | INFO     | sum of deviations: -10545592038.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,421 | INFO     | mean x: 1749050339.5
[2025-06-04 20:38:19] 2025-06-04 17:01:42,421 | INFO     | mean y: 2520999.3146067415
[2025-06-04 20:38:19] 2025-06-04 17:01:42,421 | INFO     | -- intersect: 10549997145.87079
[2025-06-04 20:38:19] 2025-06-04 17:01:42,421 | INFO     | intersect: 10549997145.87079
[2025-06-04 20:38:19] 2025-06-04 17:01:42,421 | INFO     | chi2: 1.8282198175176494
[2025-06-04 20:38:19] 2025-06-04 17:01:42,422 | INFO     | current chi2=1.8282198175176494 (change=0.04581237432319619 %)
[2025-06-04 20:38:19] 2025-06-04 17:01:42,422 | INFO     | right removable region: 177
[2025-06-04 20:38:19] 2025-06-04 17:01:42,422 | INFO     | sum of square deviations: 1900284932.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,423 | INFO     | sum of deviations: -55220969739.00001
[2025-06-04 20:38:19] 2025-06-04 17:01:42,423 | INFO     | mean x: 1749050797.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,423 | INFO     | mean y: 2537052.393442623
[2025-06-04 20:38:19] 2025-06-04 17:01:42,423 | INFO     | -- intersect: 50828747115.24882
[2025-06-04 20:38:19] 2025-06-04 17:01:42,424 | INFO     | intersect: 50828747115.24882
[2025-06-04 20:38:19] 2025-06-04 17:01:42,424 | INFO     | chi2: 0.9946643887713595
[2025-06-04 20:38:19] 2025-06-04 17:01:42,424 | INFO     | current chi2=0.9946643887713595 (change=61.690177019853266 %)
[2025-06-04 20:38:19] 2025-06-04 17:01:42,424 | INFO     | sum of square deviations: 1748737904.5
[2025-06-04 20:38:19] 2025-06-04 17:01:42,425 | INFO     | sum of deviations: -53941278646.5
[2025-06-04 20:38:19] 2025-06-04 17:01:42,425 | INFO     | mean x: 1749050949.5
[2025-06-04 20:38:19] 2025-06-04 17:01:42,426 | INFO     | mean y: 2535710.54494382
[2025-06-04 20:38:19] 2025-06-04 17:01:42,426 | INFO     | -- intersect: 53953470491.06619
[2025-06-04 20:38:19] 2025-06-04 17:01:42,426 | INFO     | intersect: 53953470491.06619
[2025-06-04 20:38:19] 2025-06-04 17:01:42,426 | INFO     | chi2: 0.9757538762622074
[2025-06-04 20:38:19] 2025-06-04 17:01:42,426 | INFO     | current chi2=0.9757538762622074 (change=1.9011952898515805 %)
[2025-06-04 20:38:19] 2025-06-04 17:01:42,426 | INFO     | left removable region: 20
[2025-06-04 20:38:19] 2025-06-04 17:01:42,427 | INFO     | sum of square deviations: 1199940638.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,428 | INFO     | sum of deviations: -29435442823.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,428 | INFO     | mean x: 1749050919.0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,428 | INFO     | mean y: 2539432.229299363
[2025-06-04 20:38:19] 2025-06-04 17:01:42,428 | INFO     | -- intersect: 42908068831.20954
[2025-06-04 20:38:19] 2025-06-04 17:01:42,428 | INFO     | intersect: 42908068831.20954
[2025-06-04 20:38:19] 2025-06-04 17:01:42,428 | INFO     | chi2: 0.16349471495494788
[2025-06-04 20:38:19] 2025-06-04 17:01:42,428 | INFO     | -- intersect: 42908068831.20954
[2025-06-04 20:38:19] 2025-06-04 17:01:42,429 | INFO     | current memory leak: -24.53 B/s (using 157 data points, chi2=0.16)
[2025-06-04 20:38:19] 2025-06-04 17:01:42,429 | INFO     | ..............................
[2025-06-04 20:38:19] 2025-06-04 17:01:42,429 | INFO     | . Timing measurements:
[2025-06-04 20:38:19] 2025-06-04 17:01:42,429 | INFO     | . get job = 0 s
[2025-06-04 20:38:19] 2025-06-04 17:01:42,430 | INFO     | . initial setup = 2 s
[2025-06-04 20:38:19] 2025-06-04 17:01:42,430 | INFO     | . payload setup = 15 s
[2025-06-04 20:38:19] 2025-06-04 17:01:42,430 | INFO     | . stage-in = 0 s
[2025-06-04 20:38:19] 2025-06-04 17:01:42,430 | INFO     | . payload execution = 11473 s
[2025-06-04 20:38:19] 2025-06-04 17:01:42,430 | INFO     | . stage-out = 11 s
[2025-06-04 20:38:19] 2025-06-04 17:01:42,430 | INFO     | . log creation = 1 s
[2025-06-04 20:38:19] 2025-06-04 17:01:42,430 | INFO     | ..............................
[2025-06-04 20:38:19] 2025-06-04 17:01:42,786 | INFO     | 
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | job summary report
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | --------------------------------------------------
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | PanDA job id: 6678152236
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | task id: 45006595
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | errors: (none)
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | pilot state: finished 
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | transexitcode: 0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | exeerrorcode: 0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | exeerrordiag: 
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | exitcode: 0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | exitmsg: OK
[2025-06-04 20:38:19] 2025-06-04 17:01:42,787 | INFO     | cpuconsumptiontime: 43469 s
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | nevents: 400
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | neventsw: 0
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | pid: 20062
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | pgrp: 20062
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | corecount: 8
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | event service: False
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | sizes: {0: 2397171, 1: 2397370, 9: 2397576, 12: 2397604, 11492: 2426392, 11493: 2426391, 11506: 2435516, 11507: 2435572, 11600: 2435742}
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | --------------------------------------------------
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | 
[2025-06-04 20:38:19] 2025-06-04 17:01:42,788 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 20:38:19] 2025-06-04 17:01:43,200 | INFO     | PID=11516 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 20:38:19] 2025-06-04 17:01:43,200 | INFO     | .. there are 9 such processes running
[2025-06-04 20:38:19] 2025-06-04 17:01:43,224 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,224 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,224 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,224 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:38:19] 2025-06-04 17:01:43,226 | INFO     | job 6678152236 has completed (purged errors)
[2025-06-04 20:38:19] 2025-06-04 17:01:43,226 | INFO     | overall cleanup function is called
[2025-06-04 20:38:19] 2025-06-04 17:01:44,234 | INFO     | --- collectZombieJob: --- 10, [20062]
[2025-06-04 20:38:19] 2025-06-04 17:01:44,235 | INFO     | zombie collector waiting for pid 20062
[2025-06-04 20:38:19] 2025-06-04 17:01:44,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:38:19] 2025-06-04 17:01:44,235 | INFO     | collected zombie processes
[2025-06-04 20:38:19] 2025-06-04 17:01:44,235 | INFO     | will attempt to kill all subprocesses of pid=20062
[2025-06-04 20:38:19] 2025-06-04 17:01:44,349 | INFO     | process IDs to be killed: [20062] (in reverse order)
[2025-06-04 20:38:19] 2025-06-04 17:01:45,201 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:38:19] 2025-06-04 17:01:45,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:38:19] 2025-06-04 17:01:45,205 | INFO     | did not find any defunct processes belonging to 20062
[2025-06-04 20:38:19] 2025-06-04 17:01:45,209 | INFO     | did not find any defunct processes belonging to 20062
[2025-06-04 20:38:19] 2025-06-04 17:01:45,209 | INFO     | ready for new job
[2025-06-04 20:38:19] 2025-06-04 17:01:45,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:38:19] 2025-06-04 17:01:45,211 | INFO     | **************************************
[2025-06-04 20:38:19] 2025-06-04 17:01:45,211 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:38:19] 2025-06-04 17:01:45,211 | INFO     | **************************************
[2025-06-04 20:38:19] 2025-06-04 17:01:45,211 | INFO     | 
[2025-06-04 20:38:19] 2025-06-04 17:01:45,212 | INFO     | pilot is running in a VM
[2025-06-04 20:38:19] 2025-06-04 17:01:45,212 | INFO     | architecture information:
[2025-06-04 20:38:19] 2025-06-04 17:01:45,221 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:38:19] 2025-06-04 17:01:45,512 | INFO     | cat /etc/os-release:
[2025-06-04 20:38:19] NAME="CentOS Linux"
[2025-06-04 20:38:19] VERSION="7 (Core)"
[2025-06-04 20:38:19] ID="centos"
[2025-06-04 20:38:19] ID_LIKE="rhel fedora"
[2025-06-04 20:38:19] VERSION_ID="7"
[2025-06-04 20:38:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:38:19] ANSI_COLOR="0;31"
[2025-06-04 20:38:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:38:19] HOME_URL="https://www.centos.org/"
[2025-06-04 20:38:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:38:19] 
[2025-06-04 20:38:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:38:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:38:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:38:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:38:19] 
[2025-06-04 20:38:19] 2025-06-04 17:01:45,512 | INFO     | **************************************
[2025-06-04 20:38:19] 2025-06-04 17:01:46,016 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 20:38:19] 2025-06-04 17:01:46,215 | INFO     | sufficient remaining disk space (496766025728 B)
[2025-06-04 20:38:19] 2025-06-04 17:01:46,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:38:19] 2025-06-04 17:01:46,216 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:38:19] 2025-06-04 17:01:46,216 | INFO     | update_server=False
[2025-06-04 20:38:19] 2025-06-04 17:01:46,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:38:19] 2025-06-04 17:01:46,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:38:19] 2025-06-04 17:01:46,217 | INFO     | aborting loop
[2025-06-04 20:38:19] 2025-06-04 17:01:46,611 | INFO     | all data control threads have been joined
[2025-06-04 20:38:19] 2025-06-04 17:01:46,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:38:19] 2025-06-04 17:01:47,088 | INFO     | all job control threads have been joined
[2025-06-04 20:38:19] 2025-06-04 17:01:47,214 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:38:19] 2025-06-04 17:01:47,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:38:19] 2025-06-04 17:01:47,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:38:19] 2025-06-04 17:01:47,221 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:47,222 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:47,259 | INFO     | [job] validate thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:47,279 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:47,503 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:47,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:38:19] 2025-06-04 17:01:47,601 | INFO     | all payload control threads have been joined
[2025-06-04 20:38:19] 2025-06-04 17:01:47,617 | INFO     | [data] control thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:47,817 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:48,094 | INFO     | [job] control thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:48,116 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:48,319 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:48,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:48,482 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:48,560 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:48,607 | INFO     | [payload] control thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:48,651 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:49,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:38:19] 2025-06-04 17:01:53,715 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:38:19] 2025-06-04 17:01:54,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264286680896)>', '<ExcThread(monitor, started 140263984961280)>']
[2025-06-04 20:38:19] 2025-06-04 17:01:55,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:38:19] 2025-06-04 17:01:55,265 | INFO     | [monitor] control thread has ended
[2025-06-04 20:38:19] 2025-06-04 17:01:59,293 | INFO     | all workflow threads have been joined
[2025-06-04 20:38:19] 2025-06-04 17:01:59,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:38:19] 2025-06-04 17:01:59,294 | INFO     | traces error code: 0
[2025-06-04 20:38:19] 2025-06-04 17:01:59,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:38:19] 2025-06-04 17:01:59,606 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:38:19] 2025-06-04 17:01:59,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:38:19] 2025-06-04 17:01:59,782 [wrapper] pilotpid: 11516
[2025-06-04 20:38:19] 2025-06-04 17:01:59,841 [wrapper] Pilot exit status: 0
[2025-06-04 20:38:19] 2025-06-04 17:02:00,307 [wrapper] pandaids: 6678152236
[2025-06-04 20:38:19] 2025-06-04 17:02:01,130 [wrapper] cleanup supervisor_pilot 20092 11517
[2025-06-04 20:38:19] 2025-06-04 17:02:01,170 [wrapper] Test setup, not cleaning
[2025-06-04 20:38:19] 2025-06-04 17:02:01,235 [wrapper] apfmon messages muted
[2025-06-04 20:38:19] 2025-06-04 17:02:01,284 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:38:19] 2025-06-04 17:02:01,356 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:38:19]  *** Error codes and diagnostics ***
[2025-06-04 20:38:19]     "exeErrorCode": 0,
[2025-06-04 20:38:19]     "exeErrorDiag": "",
[2025-06-04 20:38:19]     "pilotErrorCode": 0,
[2025-06-04 20:38:19]     "pilotErrorDiag": "",
[2025-06-04 20:38:19]  *** Listing of results directory ***
[2025-06-04 20:38:19] total 386572
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:31 queuedata.json
[2025-06-04 20:38:19] -rwx------. 1 boinc boinc     37140 Jun  4 00:31 runpilot2-wrapper.sh
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:38:19] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:47 run_atlas
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:47 job.xml
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc      6392 Jun  4 15:47 init_data.xml
[2025-06-04 20:38:19] -rw-r--r--. 2 boinc boinc 216065180 Jun  4 15:47 EVNT.45006593._001885.pool.root.1
[2025-06-04 20:38:19] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:47 start_atlas.sh
[2025-06-04 20:38:19] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:47 shared
[2025-06-04 20:38:19] -rw-r--r--. 2 boinc boinc    508888 Jun  4 15:47 input.tar.gz
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:47 boinc_lockfile
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc      2525 Jun  4 15:47 pandaJob.out
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc    986819 Jun  4 15:47 agis_schedconf.cvmfs.json
[2025-06-04 20:38:19] drwx------. 4 boinc boinc      4096 Jun  4 15:47 pilot3
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc 173221544 Jun  4 18:58 HITS.45006595._047013.pool.root.1
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:59 boinc_task_state.xml
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc      1017 Jun  4 18:59 memory_monitor_summary.json
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc   1598969 Jun  4 19:00 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc    354140 Jun  4 19:00 log.45006595._047013.job.log.tgz.1
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc        95 Jun  4 19:01 pilot_heartbeat.json
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc      7697 Jun  4 19:01 heartbeat.json
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc      4416 Jun  4 19:01 pilotlog.txt
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc   1018235 Jun  4 19:02 log.45006595._047013.job.log.1
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc       357 Jun  4 19:02 output.list
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc       620 Jun  4 19:02 runtime_log
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc   1392640 Jun  4 19:02 result.tar.gz
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc      8659 Jun  4 19:02 runtime_log.err
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc       657 Jun  4 19:02 707NDmELpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm98ZKDma8QzOo.diag
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc      8192 Jun  4 20:38 boinc_mmap_file
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc        28 Jun  4 20:38 wrapper_checkpoint.txt
[2025-06-04 20:38:19] -rw-r--r--. 1 boinc boinc     20551 Jun  4 20:38 stderr.txt
[2025-06-04 20:38:19] HITS file was successfully produced:
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc 173221544 Jun  4 18:58 shared/HITS.pool.root.1
[2025-06-04 20:38:19]  *** Contents of shared directory: ***
[2025-06-04 20:38:19] total 382044
[2025-06-04 20:38:19] -rw-r--r--. 2 boinc boinc 216065180 Jun  4 15:47 ATLAS.root_0
[2025-06-04 20:38:19] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:47 start_atlas.sh
[2025-06-04 20:38:19] -rw-r--r--. 2 boinc boinc    508888 Jun  4 15:47 input.tar.gz
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc 173221544 Jun  4 18:58 HITS.pool.root.1
[2025-06-04 20:38:19] -rw-------. 1 boinc boinc   1392640 Jun  4 19:02 result.tar.gz
20:38:20 (7844): run_atlas exited; CPU time 43603.594732
20:38:20 (7844): called boinc_finish(0)

</stderr_txt>
]]>

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