Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:32:54 (77021): wrapper (7.7.26015): starting
20:32:54 (77021): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 20:32:54] Arguments: --nthreads 8
[2025-06-03 20:32:54] Threads: 8
[2025-06-03 20:32:54] Checking for CVMFS
[2025-06-03 20:32:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:32:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:32:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:32:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:32:54] 2.12.6.0 2000804 22538 494416 146762 0 302 32829640 32935937 8097 16776704 0 122481316 99.686 100285489 24233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 20:32:54] CVMFS is ok
[2025-06-03 20:32:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:32:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:32:54] Further information can be found at the LHC@home message board.
[2025-06-03 20:32:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:32:54] Checking for apptainer binary...
[2025-06-03 20:32:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:32:54] Running /usr/bin/apptainer --version
[2025-06-03 20:32:54] apptainer version 1.4.1-1.el9
[2025-06-03 20:32:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:32:55] c6-12-27-3.aglt2.org
[2025-06-03 20:32:55] apptainer works
[2025-06-03 20:32:55] Set ATHENA_PROC_NUMBER=8
[2025-06-03 20:32:55] Set ATHENA_CORE_NUMBER=8
[2025-06-03 20:32:55] Starting ATLAS job with PandaID=6666850646
[2025-06-03 20:32:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:47:47]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:47:47]  lfn=log.44871837._064726.job.log.tgz.1
[2025-06-03 21:47:47]  mtime=0
[2025-06-03 21:47:47]  protocol_id=None
[2025-06-03 21:47:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 21:47:47]  replicas=None
[2025-06-03 21:47:47]  scope=mc23_13p6TeV
[2025-06-03 21:47:47]  status=None
[2025-06-03 21:47:47]  status_code=0
[2025-06-03 21:47:47]  storage_token=
[2025-06-03 21:47:47]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6666850646/log.44871837._064726.job.log.tgz.1
[2025-06-03 21:47:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/cc/log.44871837._064726.job.log.tgz.1
[2025-06-03 21:47:47]  workdir=None
[2025-06-03 21:47:47] ]
[2025-06-03 21:47:47] 2025-06-04 01:47:22,282 | INFO     | transferring file log.44871837._064726.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6666850646/log.44871837._064726.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:47:47] 2025-06-04 01:47:22,282 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6666850646/log.44871837._064726.job.log.tgz.1 /tmp/boinchome/slots/2/log.44871837._064726.job
[2025-06-03 21:47:47] 2025-06-04 01:47:22,293 | INFO     | adding to output.list: log.44871837._064726.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/cc/log.44871837._064726.job.log.tg
[2025-06-03 21:47:47] 2025-06-04 01:47:22,294 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:47:47] 2025-06-04 01:47:22,294 | INFO     | summary of transferred files:
[2025-06-03 21:47:47] 2025-06-04 01:47:22,294 | INFO     |  -- lfn=log.44871837._064726.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:47:47] 2025-06-04 01:47:22,294 | INFO     | stage-out finished correctly
[2025-06-03 21:47:47] 2025-06-04 01:47:23,200 | INFO     | monitor loop #336: job 0:6666850646 is in state 'finished'
[2025-06-03 21:47:47] 2025-06-04 01:47:23,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:47:47] 2025-06-04 01:47:25,702 | INFO     | monitor loop #337: job 0:6666850646 is in state 'finished'
[2025-06-03 21:47:47] 2025-06-04 01:47:25,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:47:47] 2025-06-04 01:47:25,791 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:47:47] 2025-06-04 01:47:25,834 | INFO     | job 6666850646 has state=finished
[2025-06-03 21:47:47] 2025-06-04 01:47:25,835 | INFO     | preparing for final server update for job 6666850646 in state='finished'
[2025-06-03 21:47:47] 2025-06-04 01:47:25,894 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 21:47:47] 2025-06-04 01:47:25,894 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:47:47] 2025-06-04 01:47:25,894 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:47:47] 2025-06-04 01:47:25,895 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:47:47] 2025-06-04 01:47:25,895 | INFO     | job 6666850646 has finished - writing final server update
[2025-06-03 21:47:47] 2025-06-04 01:47:25,895 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:47:47] 2025-06-04 01:47:25,909 | INFO     | executing command: lscpu
[2025-06-03 21:47:47] 2025-06-04 01:47:25,970 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:47:47] 2025-06-04 01:47:28,060 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 21:47:47] 2025-06-04 01:47:28,061 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6666850646/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:47:47] 2025-06-04 01:47:28,061 | INFO     | extracted standard info from prmon json
[2025-06-03 21:47:47] 2025-06-04 01:47:28,061 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:47:47] 2025-06-04 01:47:28,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:47:47] 2025-06-04 01:47:28,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:47:47] 2025-06-04 01:47:28,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | sum of square deviations: 89127252.5
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | sum of deviations: 3358588843.4999995
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | mean x: 1748999488.5
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | mean y: 2227855.1363636362
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | -- intersect: -65905449141.451256
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | intersect: -65905449141.451256
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | chi2: 0.8168966095736309
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | -- intersect: -65905449141.451256
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | current memory leak: 37.68 B/s (using 66 data points, chi2=0.82)
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | ..............................
[2025-06-03 21:47:47] 2025-06-04 01:47:28,063 | INFO     | . Timing measurements:
[2025-06-03 21:47:47] 2025-06-04 01:47:28,064 | INFO     | . get job = 0 s
[2025-06-03 21:47:47] 2025-06-04 01:47:28,064 | INFO     | . initial setup = 2 s
[2025-06-03 21:47:47] 2025-06-04 01:47:28,064 | INFO     | . payload setup = 3 s
[2025-06-03 21:47:47] 2025-06-04 01:47:28,064 | INFO     | . stage-in = 0 s
[2025-06-03 21:47:47] 2025-06-04 01:47:28,064 | INFO     | . payload execution = 4440 s
[2025-06-03 21:47:47] 2025-06-04 01:47:28,064 | INFO     | . stage-out = 0 s
[2025-06-03 21:47:47] 2025-06-04 01:47:28,064 | INFO     | . log creation = 0 s
[2025-06-03 21:47:47] 2025-06-04 01:47:28,064 | INFO     | ..............................
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | 
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | job summary report
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | --------------------------------------------------
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | PanDA job id: 6666850646
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | task id: 44871837
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | errors: (none)
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | pilot state: finished 
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | transexitcode: 0
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | exeerrorcode: 0
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | exeerrordiag: 
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | exitcode: 0
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | exitmsg: OK
[2025-06-03 21:47:47] 2025-06-04 01:47:28,209 | INFO     | cpuconsumptiontime: 30515 s
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | nevents: 400
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | neventsw: 0
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | pid: 87070
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | pgrp: 87070
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | corecount: 8
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | event service: False
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | sizes: {0: 2405234, 2: 2405440, 10: 2405468, 4447: 2440476, 4451: 2440476, 4453: 2440646}
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | --------------------------------------------------
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | 
[2025-06-03 21:47:47] 2025-06-04 01:47:28,210 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,221 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:47:47] 2025-06-04 01:47:28,222 | INFO     | job 6666850646 has completed (purged errors)
[2025-06-03 21:47:47] 2025-06-04 01:47:28,222 | INFO     | overall cleanup function is called
[2025-06-03 21:47:47] 2025-06-04 01:47:29,228 | INFO     | --- collectZombieJob: --- 10, [87070]
[2025-06-03 21:47:47] 2025-06-04 01:47:29,228 | INFO     | zombie collector waiting for pid 87070
[2025-06-03 21:47:47] 2025-06-04 01:47:29,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:47:47] 2025-06-04 01:47:29,229 | INFO     | collected zombie processes
[2025-06-03 21:47:47] 2025-06-04 01:47:29,229 | INFO     | will attempt to kill all subprocesses of pid=87070
[2025-06-03 21:47:47] 2025-06-04 01:47:29,700 | INFO     | PID=80617 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 21:47:47] 2025-06-04 01:47:29,700 | INFO     | .. there are 14 such processes running
[2025-06-03 21:47:47] 2025-06-04 01:47:29,703 | INFO     | process IDs to be killed: [87070] (in reverse order)
[2025-06-03 21:47:47] 2025-06-04 01:47:29,756 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:47:47] 2025-06-04 01:47:29,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:47:47] 2025-06-04 01:47:29,763 | INFO     | did not find any defunct processes belonging to 87070
[2025-06-03 21:47:47] 2025-06-04 01:47:29,768 | INFO     | did not find any defunct processes belonging to 87070
[2025-06-03 21:47:47] 2025-06-04 01:47:29,768 | INFO     | ready for new job
[2025-06-03 21:47:47] 2025-06-04 01:47:29,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:47:47] 2025-06-04 01:47:29,769 | INFO     | **************************************
[2025-06-03 21:47:47] 2025-06-04 01:47:29,769 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:47:47] 2025-06-04 01:47:29,769 | INFO     | **************************************
[2025-06-03 21:47:47] 2025-06-04 01:47:29,769 | INFO     | 
[2025-06-03 21:47:47] 2025-06-04 01:47:29,784 | INFO     | architecture information:
[2025-06-03 21:47:47] 2025-06-04 01:47:29,784 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:47:47] 2025-06-04 01:47:29,794 | INFO     | cat /etc/os-release:
[2025-06-03 21:47:47] NAME="CentOS Linux"
[2025-06-03 21:47:47] VERSION="7 (Core)"
[2025-06-03 21:47:47] ID="centos"
[2025-06-03 21:47:47] ID_LIKE="rhel fedora"
[2025-06-03 21:47:47] VERSION_ID="7"
[2025-06-03 21:47:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:47:47] ANSI_COLOR="0;31"
[2025-06-03 21:47:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:47:47] HOME_URL="https://www.centos.org/"
[2025-06-03 21:47:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:47:47] 
[2025-06-03 21:47:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:47:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:47:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:47:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:47:47] 
[2025-06-03 21:47:47] 2025-06-04 01:47:29,794 | INFO     | **************************************
[2025-06-03 21:47:47] 2025-06-04 01:47:30,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 21:47:47] 2025-06-04 01:47:30,307 | INFO     | sufficient remaining disk space (95681511424 B)
[2025-06-03 21:47:47] 2025-06-04 01:47:30,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:47:47] 2025-06-04 01:47:30,307 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:47:47] 2025-06-04 01:47:30,307 | INFO     | update_server=False
[2025-06-03 21:47:47] 2025-06-04 01:47:30,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:47:47] 2025-06-04 01:47:30,307 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:47:47] 2025-06-04 01:47:30,307 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:47:47] 2025-06-04 01:47:30,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:47:47] 2025-06-04 01:47:30,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:47:47] 2025-06-04 01:47:30,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:47:47] 2025-06-04 01:47:30,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 21:47:47] 2025-06-04 01:47:30,708 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 21:47:47] 2025-06-04 01:47:30,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:47:47] 2025-06-04 01:47:30,708 | INFO     | will abort loop
[2025-06-03 21:47:47] 2025-06-04 01:47:30,744 | INFO     | all data control threads have been joined
[2025-06-03 21:47:47] 2025-06-04 01:47:30,756 | INFO     | all payload control threads have been joined
[2025-06-03 21:47:47] 2025-06-04 01:47:31,312 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:31,689 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:31,713 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:31,749 | INFO     | [data] control thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:31,761 | INFO     | [payload] control thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:31,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:47:47] 2025-06-04 01:47:31,909 | INFO     | all job control threads have been joined
[2025-06-03 21:47:47] 2025-06-04 01:47:31,956 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:32,179 | INFO     | [job] validate thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:32,341 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:32,351 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:32,412 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:32,451 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:32,638 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:32,915 | INFO     | [job] control thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:33,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:47:47] 2025-06-04 01:47:34,124 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:35,845 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:40,563 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:47:47] 2025-06-04 01:47:41,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:47:47] 2025-06-04 01:47:42,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491489044288)>', '<ExcThread(monitor, started 140490863277824)>']
[2025-06-03 21:47:47] 2025-06-04 01:47:43,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:47:47] 2025-06-04 01:47:43,373 | INFO     | [monitor] control thread has ended
[2025-06-03 21:47:47] 2025-06-04 01:47:47,794 | INFO     | all workflow threads have been joined
[2025-06-03 21:47:47] 2025-06-04 01:47:47,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:47:47] 2025-06-04 01:47:47,795 | INFO     | traces error code: 0
[2025-06-03 21:47:47] 2025-06-04 01:47:47,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:47:47] 2025-06-04 01:47:47,873 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:47:47] 2025-06-04 01:47:47,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:47:47] 2025-06-04 01:47:47,876 [wrapper] pilotpid: 80617
[2025-06-03 21:47:47] 2025-06-04 01:47:47,877 [wrapper] Pilot exit status: 0
[2025-06-03 21:47:47] 2025-06-04 01:47:47,882 [wrapper] pandaids: 6666850646
[2025-06-03 21:47:47] 2025-06-04 01:47:47,918 [wrapper] cleanup supervisor_pilot  315687 80618
[2025-06-03 21:47:47] 2025-06-04 01:47:47,919 [wrapper] Test setup, not cleaning
[2025-06-03 21:47:47] 2025-06-04 01:47:47,921 [wrapper] apfmon messages muted
[2025-06-03 21:47:47] 2025-06-04 01:47:47,922 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:47:47] 2025-06-04 01:47:47,923 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:47:47]  *** Error codes and diagnostics ***
[2025-06-03 21:47:47]     "exeErrorCode": 0,
[2025-06-03 21:47:47]     "exeErrorDiag": "",
[2025-06-03 21:47:47]     "pilotErrorCode": 0,
[2025-06-03 21:47:47]     "pilotErrorDiag": "",
[2025-06-03 21:47:47]  *** Listing of results directory ***
[2025-06-03 21:47:47] total 424904
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-06-03 21:47:47] -rwx------. 1 boincer umatlas     37140 May 27 04:48 runpilot2-wrapper.sh
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas      5111 May 27 04:48 queuedata.json
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas       100 Jun  3 20:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:47:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 20:32 run_atlas
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas       105 Jun  3 20:32 job.xml
[2025-06-03 21:47:47] -rw-r--r--. 2 boincer umatlas 224859096 Jun  3 20:32 EVNT.44871834._002551.pool.root.1
[2025-06-03 21:47:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:32 start_atlas.sh
[2025-06-03 21:47:47] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 20:32 shared
[2025-06-03 21:47:47] -rw-r--r--. 2 boincer umatlas    508872 Jun  3 20:32 input.tar.gz
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas         0 Jun  3 20:32 boinc_lockfile
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas      2559 Jun  3 20:32 pandaJob.out
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas    986069 Jun  3 20:32 agis_schedconf.cvmfs.json
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas   1603667 Jun  3 20:33 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:47:47] drwx------. 4 boincer umatlas      4096 Jun  3 20:33 pilot3
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas       529 Jun  3 21:46 boinc_task_state.xml
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas 204929774 Jun  3 21:46 HITS.44871837._064726.pool.root.1
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas        95 Jun  3 21:47 pilot_heartbeat.json
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas      1032 Jun  3 21:47 memory_monitor_summary.json
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas    293621 Jun  3 21:47 log.44871837._064726.job.log.tgz.1
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas      6859 Jun  3 21:47 init_data.xml
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas      7715 Jun  3 21:47 heartbeat.json
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas        27 Jun  3 21:47 wrapper_checkpoint.txt
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:47 boinc_mmap_file
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas      4734 Jun  3 21:47 pilotlog.txt
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas    444415 Jun  3 21:47 log.44871837._064726.job.log.1
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas       357 Jun  3 21:47 output.list
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:47 runtime_log
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas    757760 Jun  3 21:47 result.tar.gz
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas      8669 Jun  3 21:47 runtime_log.err
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas       652 Jun  3 21:47 ibuLDmDA5d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPaRKDmWfn0xm.diag
[2025-06-03 21:47:47] -rw-r--r--. 1 boincer umatlas     21595 Jun  3 21:47 stderr.txt
[2025-06-03 21:47:47] HITS file was successfully produced:
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas 204929774 Jun  3 21:46 shared/HITS.pool.root.1
[2025-06-03 21:47:47]  *** Contents of shared directory: ***
[2025-06-03 21:47:47] total 420984
[2025-06-03 21:47:47] -rw-r--r--. 2 boincer umatlas 224859096 Jun  3 20:32 ATLAS.root_0
[2025-06-03 21:47:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:32 start_atlas.sh
[2025-06-03 21:47:47] -rw-r--r--. 2 boincer umatlas    508872 Jun  3 20:32 input.tar.gz
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas 204929774 Jun  3 21:46 HITS.pool.root.1
[2025-06-03 21:47:47] -rw-------. 1 boincer umatlas    757760 Jun  3 21:47 result.tar.gz
21:47:49 (77021): run_atlas exited; CPU time 30614.534059
21:47:49 (77021): called boinc_finish(0)

</stderr_txt>
]]>

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