Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:26:00 (3590742): wrapper (7.7.26015): starting
22:26:00 (3590742): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 22:26:00] Arguments: --nthreads 4
[2025-06-05 22:26:00] Threads: 4
[2025-06-05 22:26:00] Checking for CVMFS
[2025-06-05 22:26:00] No cvmfs_config command found, will try listing directly
[2025-06-05 22:26:00] CVMFS is ok
[2025-06-05 22:26:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 22:26:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 22:26:00] Further information can be found at the LHC@home message board.
[2025-06-05 22:26:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 22:26:00] Checking for apptainer binary...
[2025-06-05 22:26:00] which: no apptainer in ((null))
[2025-06-05 22:26:00] apptainer is not installed, using version from CVMFS
[2025-06-05 22:26:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 22:26:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-05 22:26:00] apptainer works
[2025-06-05 22:26:00] Set ATHENA_PROC_NUMBER=4
[2025-06-05 22:26:00] Set ATHENA_CORE_NUMBER=4
[2025-06-05 22:26:00] Starting ATLAS job with PandaID=6677921511
[2025-06-05 22:26:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 01:15:52]  *** The last 200 lines of the pilot log: ***
[2025-06-06 01:15:52] 2025-06-05 23:15:31,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 01:15:52] 2025-06-05 23:15:32,140 | INFO     | PID=3594453 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 01:15:52] 2025-06-05 23:15:32,140 | INFO     | .. there are 8 such processes running
[2025-06-06 01:15:52] 2025-06-05 23:15:34,311 | INFO     | monitor loop #737: job 0:6677921511 is in state 'finished'
[2025-06-06 01:15:52] 2025-06-05 23:15:34,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 01:15:52] 2025-06-05 23:15:34,370 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 01:15:52] 2025-06-05 23:15:34,371 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6677921511/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:15:52] 2025-06-05 23:15:34,372 | INFO     | extracted standard info from prmon json
[2025-06-06 01:15:52] 2025-06-05 23:15:34,372 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 01:15:52] 2025-06-05 23:15:34,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 01:15:52] 2025-06-05 23:15:34,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 01:15:52] 2025-06-05 23:15:34,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 01:15:52] 2025-06-05 23:15:34,376 | INFO     | fitting pss+swap vs Time
[2025-06-06 01:15:52] 2025-06-05 23:15:34,377 | INFO     | sum of square deviations: 1418361477.5
[2025-06-06 01:15:52] 2025-06-05 23:15:34,378 | INFO     | sum of deviations: 17044699910.000002
[2025-06-06 01:15:52] 2025-06-05 23:15:34,378 | INFO     | mean x: 1749160231.5
[2025-06-06 01:15:52] 2025-06-05 23:15:34,378 | INFO     | mean y: 2307569.5903614457
[2025-06-06 01:15:52] 2025-06-05 23:15:34,379 | INFO     | -- intersect: -21017659281.85963
[2025-06-06 01:15:52] 2025-06-05 23:15:34,379 | INFO     | intersect: -21017659281.85963
[2025-06-06 01:15:52] 2025-06-05 23:15:34,379 | INFO     | chi2: 1.7449845580825598
[2025-06-06 01:15:52] 2025-06-05 23:15:34,379 | INFO     | sum of square deviations: 1294014960.0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,380 | INFO     | sum of deviations: 16608734069.0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,380 | INFO     | mean x: 1749160079.0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,381 | INFO     | mean y: 2307034.7888198756
[2025-06-06 01:15:52] 2025-06-05 23:15:34,381 | INFO     | -- intersect: -22448232946.775253
[2025-06-06 01:15:52] 2025-06-05 23:15:34,381 | INFO     | intersect: -22448232946.775253
[2025-06-06 01:15:52] 2025-06-05 23:15:34,381 | INFO     | chi2: 1.7468843590849255
[2025-06-06 01:15:52] 2025-06-05 23:15:34,381 | INFO     | current chi2=1.7468843590849255 (change=-0.10887208104885461 %)
[2025-06-06 01:15:52] 2025-06-05 23:15:34,381 | INFO     | right removable region: 160
[2025-06-06 01:15:52] 2025-06-05 23:15:34,382 | INFO     | sum of square deviations: 1294014960.0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,383 | INFO     | sum of deviations: -10770189768.000002
[2025-06-06 01:15:52] 2025-06-05 23:15:34,383 | INFO     | mean x: 1749160384.0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,383 | INFO     | mean y: 2341311.9751552795
[2025-06-06 01:15:52] 2025-06-05 23:15:34,383 | INFO     | -- intersect: 14560742762.254953
[2025-06-06 01:15:52] 2025-06-05 23:15:34,383 | INFO     | intersect: 14560742762.254953
[2025-06-06 01:15:52] 2025-06-05 23:15:34,384 | INFO     | chi2: 0.027529171991478998
[2025-06-06 01:15:52] 2025-06-05 23:15:34,384 | INFO     | current chi2=0.027529171991478998 (change=98.42238305984043 %)
[2025-06-06 01:15:52] 2025-06-05 23:15:34,385 | INFO     | sum of square deviations: 1177156955.0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,386 | INFO     | sum of deviations: -10721886673.999996
[2025-06-06 01:15:52] 2025-06-05 23:15:34,386 | INFO     | mean x: 1749160536.5
[2025-06-06 01:15:52] 2025-06-05 23:15:34,386 | INFO     | mean y: 2341223.1666666665
[2025-06-06 01:15:52] 2025-06-05 23:15:34,386 | INFO     | -- intersect: 15934202278.165941
[2025-06-06 01:15:52] 2025-06-05 23:15:34,386 | INFO     | intersect: 15934202278.165941
[2025-06-06 01:15:52] 2025-06-05 23:15:34,386 | INFO     | chi2: 0.023378401120606646
[2025-06-06 01:15:52] 2025-06-05 23:15:34,386 | INFO     | current chi2=0.023378401120606646 (change=15.0777178193268 %)
[2025-06-06 01:15:52] 2025-06-05 23:15:34,387 | INFO     | left removable region: 20
[2025-06-06 01:15:52] 2025-06-05 23:15:34,387 | INFO     | sum of square deviations: 850825255.0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,388 | INFO     | sum of deviations: -7732520948.500001
[2025-06-06 01:15:52] 2025-06-05 23:15:34,388 | INFO     | mean x: 1749160658.5
[2025-06-06 01:15:52] 2025-06-05 23:15:34,388 | INFO     | mean y: 2337935.7642857144
[2025-06-06 01:15:52] 2025-06-05 23:15:34,388 | INFO     | -- intersect: 15899164404.72389
[2025-06-06 01:15:52] 2025-06-05 23:15:34,388 | INFO     | intersect: 15899164404.72389
[2025-06-06 01:15:52] 2025-06-05 23:15:34,388 | INFO     | chi2: 0.022105727404253015
[2025-06-06 01:15:52] 2025-06-05 23:15:34,388 | INFO     | -- intersect: 15899164404.72389
[2025-06-06 01:15:52] 2025-06-05 23:15:34,389 | INFO     | current memory leak: -9.09 B/s (using 140 data points, chi2=0.02)
[2025-06-06 01:15:52] 2025-06-05 23:15:34,389 | INFO     | ..............................
[2025-06-06 01:15:52] 2025-06-05 23:15:34,389 | INFO     | . Timing measurements:
[2025-06-06 01:15:52] 2025-06-05 23:15:34,389 | INFO     | . get job = 0 s
[2025-06-06 01:15:52] 2025-06-05 23:15:34,389 | INFO     | . initial setup = 1 s
[2025-06-06 01:15:52] 2025-06-05 23:15:34,390 | INFO     | . payload setup = 7 s
[2025-06-06 01:15:52] 2025-06-05 23:15:34,390 | INFO     | . stage-in = 0 s
[2025-06-06 01:15:52] 2025-06-05 23:15:34,390 | INFO     | . payload execution = 10128 s
[2025-06-06 01:15:52] 2025-06-05 23:15:34,390 | INFO     | . stage-out = 0 s
[2025-06-06 01:15:52] 2025-06-05 23:15:34,390 | INFO     | . log creation = 0 s
[2025-06-06 01:15:52] 2025-06-05 23:15:34,390 | INFO     | ..............................
[2025-06-06 01:15:52] 2025-06-05 23:15:34,498 | INFO     | 
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | job summary report
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | --------------------------------------------------
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | PanDA job id: 6677921511
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | task id: 45006595
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | errors: (none)
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | pilot state: finished 
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | transexitcode: 0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | exeerrorcode: 0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | exeerrordiag: 
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | exitcode: 0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,499 | INFO     | exitmsg: OK
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | cpuconsumptiontime: 38668 s
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | nevents: 400
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | neventsw: 0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | pid: 3601401
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | pgrp: 3601401
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | corecount: 4
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | event service: False
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | sizes: {0: 2397347, 5: 2397553, 11: 2397609, 10139: 2426123, 10140: 2435086, 10143: 2435142, 10148: 2435440}
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | --------------------------------------------------
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | 
[2025-06-06 01:15:52] 2025-06-05 23:15:34,500 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-06 01:15:52] 2025-06-05 23:15:34,523 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,524 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,524 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,524 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,525 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 01:15:52] 2025-06-05 23:15:34,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,526 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 01:15:52] 2025-06-05 23:15:34,526 | INFO     | job 6677921511 has completed (purged errors)
[2025-06-06 01:15:52] 2025-06-05 23:15:34,526 | INFO     | overall cleanup function is called
[2025-06-06 01:15:52] 2025-06-05 23:15:35,534 | INFO     | --- collectZombieJob: --- 10, [3601401]
[2025-06-06 01:15:52] 2025-06-05 23:15:35,534 | INFO     | zombie collector waiting for pid 3601401
[2025-06-06 01:15:52] 2025-06-05 23:15:35,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 01:15:52] 2025-06-05 23:15:35,534 | INFO     | collected zombie processes
[2025-06-06 01:15:52] 2025-06-05 23:15:35,535 | INFO     | will attempt to kill all subprocesses of pid=3601401
[2025-06-06 01:15:52] 2025-06-05 23:15:35,905 | INFO     | process IDs to be killed: [3601401] (in reverse order)
[2025-06-06 01:15:52] 2025-06-05 23:15:36,019 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 01:15:52] 2025-06-05 23:15:36,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 01:15:52] 2025-06-05 23:15:36,031 | INFO     | did not find any defunct processes belonging to 3601401
[2025-06-06 01:15:52] 2025-06-05 23:15:36,042 | INFO     | did not find any defunct processes belonging to 3601401
[2025-06-06 01:15:52] 2025-06-05 23:15:36,043 | INFO     | ready for new job
[2025-06-06 01:15:52] 2025-06-05 23:15:36,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 01:15:52] 2025-06-05 23:15:36,045 | INFO     | **************************************
[2025-06-06 01:15:52] 2025-06-05 23:15:36,045 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 01:15:52] 2025-06-05 23:15:36,045 | INFO     | **************************************
[2025-06-06 01:15:52] 2025-06-05 23:15:36,045 | INFO     | 
[2025-06-06 01:15:52] 2025-06-05 23:15:36,049 | INFO     | architecture information:
[2025-06-06 01:15:52] 2025-06-05 23:15:36,050 | INFO     | executing command: cat /etc/os-release
[2025-06-06 01:15:52] 2025-06-05 23:15:36,065 | INFO     | cat /etc/os-release:
[2025-06-06 01:15:52] NAME="CentOS Linux"
[2025-06-06 01:15:52] VERSION="7 (Core)"
[2025-06-06 01:15:52] ID="centos"
[2025-06-06 01:15:52] ID_LIKE="rhel fedora"
[2025-06-06 01:15:52] VERSION_ID="7"
[2025-06-06 01:15:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 01:15:52] ANSI_COLOR="0;31"
[2025-06-06 01:15:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 01:15:52] HOME_URL="https://www.centos.org/"
[2025-06-06 01:15:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 01:15:52] 
[2025-06-06 01:15:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 01:15:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 01:15:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 01:15:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 01:15:52] 
[2025-06-06 01:15:52] 2025-06-05 23:15:36,065 | INFO     | **************************************
[2025-06-06 01:15:52] 2025-06-05 23:15:36,568 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-06 01:15:52] 2025-06-05 23:15:36,585 | INFO     | sufficient remaining disk space (644552327168 B)
[2025-06-06 01:15:52] 2025-06-05 23:15:36,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 01:15:52] 2025-06-05 23:15:36,585 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 01:15:52] 2025-06-05 23:15:36,585 | INFO     | update_server=False
[2025-06-06 01:15:52] 2025-06-05 23:15:36,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 01:15:52] 2025-06-05 23:15:36,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 01:15:52] 2025-06-05 23:15:36,586 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 01:15:52] 2025-06-05 23:15:36,586 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 01:15:52] 2025-06-05 23:15:36,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 01:15:52] 2025-06-05 23:15:36,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 01:15:52] 2025-06-05 23:15:36,792 | INFO     | all data control threads have been joined
[2025-06-06 01:15:52] 2025-06-05 23:15:36,814 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 01:15:52] 2025-06-05 23:15:36,815 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 01:15:52] 2025-06-05 23:15:36,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:15:52] 2025-06-05 23:15:36,815 | INFO     | will abort loop
[2025-06-06 01:15:52] 2025-06-05 23:15:37,240 | INFO     | all job control threads have been joined
[2025-06-06 01:15:52] 2025-06-05 23:15:37,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 01:15:52] 2025-06-05 23:15:37,590 | INFO     | [job] retrieve thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:37,635 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:37,705 | INFO     | [job] validate thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:37,797 | INFO     | [data] control thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:37,820 | INFO     | [job] job monitor thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:37,972 | INFO     | all payload control threads have been joined
[2025-06-06 01:15:52] 2025-06-05 23:15:38,087 | INFO     | [payload] validate_post thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:38,237 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:38,245 | INFO     | [job] control thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:38,589 | INFO     | [payload] failed_post thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:38,632 | INFO     | [data] copytool_in thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:38,651 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:38,725 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:38,977 | INFO     | [payload] control thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:39,357 | INFO     | [data] copytool_out thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:39,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:15:52] 2025-06-05 23:15:40,513 | INFO     | [job] queue monitor thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:40,592 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 01:15:52] 2025-06-05 23:15:41,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22540926621504)>', '<ExcThread(monitor, started 22540688787200)>']
[2025-06-06 01:15:52] 2025-06-05 23:15:42,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 01:15:52] 2025-06-05 23:15:42,614 | INFO     | [monitor] control thread has ended
[2025-06-06 01:15:52] 2025-06-05 23:15:46,808 | INFO     | all workflow threads have been joined
[2025-06-06 01:15:52] 2025-06-05 23:15:46,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 01:15:52] 2025-06-05 23:15:46,809 | INFO     | traces error code: 0
[2025-06-06 01:15:52] 2025-06-05 23:15:46,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 01:15:52] 2025-06-05 23:15:46,964 [wrapper] ==== pilot stdout END ====
[2025-06-06 01:15:52] 2025-06-05 23:15:46,967 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 01:15:52] 2025-06-05 23:15:46,970 [wrapper] pilotpid: 3594453
[2025-06-06 01:15:52] 2025-06-05 23:15:46,972 [wrapper] Pilot exit status: 0
[2025-06-06 01:15:52] 2025-06-05 23:15:46,983 [wrapper] pandaids: 6677921511
[2025-06-06 01:15:52] 2025-06-05 23:15:47,055 [wrapper] cleanup supervisor_pilot 3907203 3594454
[2025-06-06 01:15:52] 2025-06-05 23:15:47,058 [wrapper] Test setup, not cleaning
[2025-06-06 01:15:52] 2025-06-05 23:15:47,061 [wrapper] apfmon messages muted
[2025-06-06 01:15:52] 2025-06-05 23:15:47,064 [wrapper] ==== wrapper stdout END ====
[2025-06-06 01:15:52] 2025-06-05 23:15:47,067 [wrapper] ==== wrapper stderr END ====
[2025-06-06 01:15:52]  *** Error codes and diagnostics ***
[2025-06-06 01:15:52]     "exeErrorCode": 0,
[2025-06-06 01:15:52]     "exeErrorDiag": "",
[2025-06-06 01:15:52]     "pilotErrorCode": 0,
[2025-06-06 01:15:52]     "pilotErrorDiag": "",
[2025-06-06 01:15:52]  *** Listing of results directory ***
[2025-06-06 01:15:52] total 389260
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:41 pilot3.tar.gz
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:41 queuedata.json
[2025-06-06 01:15:52] -rwx------ 1 boinc boinc     37140 Jun  3 20:41 runpilot2-wrapper.sh
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc       100 Jun  5 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 01:15:52] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 22:25 run_atlas
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc       105 Jun  5 22:25 job.xml
[2025-06-06 01:15:52] -rw-r--r-- 2 boinc boinc 212610329 Jun  5 22:26 EVNT.45006593._001714.pool.root.1
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc      6636 Jun  5 22:26 init_data.xml
[2025-06-06 01:15:52] -rw-r--r-- 2 boinc boinc     15093 Jun  5 22:26 start_atlas.sh
[2025-06-06 01:15:52] drwxrwx--x 2 boinc boinc      4096 Jun  5 22:26 shared
[2025-06-06 01:15:52] -rw-r--r-- 2 boinc boinc    508871 Jun  5 22:26 input.tar.gz
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc         0 Jun  5 22:26 boinc_lockfile
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc      2522 Jun  5 22:26 pandaJob.out
[2025-06-06 01:15:52] -rw------- 1 boinc boinc    987599 Jun  5 22:26 agis_schedconf.cvmfs.json
[2025-06-06 01:15:52] -rw------- 1 boinc boinc   1598969 Jun  5 22:26 agis_ddmendpoints.agis.ALL.json
[2025-06-06 01:15:52] drwx------ 4 boinc boinc      4096 Jun  5 22:26 pilot3
[2025-06-06 01:15:52] -rw------- 1 boinc boinc        95 Jun  6 01:14 pilot_heartbeat.json
[2025-06-06 01:15:52] -rw------- 1 boinc boinc 179676094 Jun  6 01:14 HITS.45006595._042722.pool.root.1
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc       529 Jun  6 01:15 boinc_task_state.xml
[2025-06-06 01:15:52] -rw------- 1 boinc boinc      1035 Jun  6 01:15 memory_monitor_summary.json
[2025-06-06 01:15:52] -rw------- 1 boinc boinc    283286 Jun  6 01:15 log.45006595._042722.job.log.tgz.1
[2025-06-06 01:15:52] -rw------- 1 boinc boinc      7728 Jun  6 01:15 heartbeat.json
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc        26 Jun  6 01:15 wrapper_checkpoint.txt
[2025-06-06 01:15:52] -rw------- 1 boinc boinc      4672 Jun  6 01:15 pilotlog.txt
[2025-06-06 01:15:52] -rw------- 1 boinc boinc    953708 Jun  6 01:15 log.45006595._042722.job.log.1
[2025-06-06 01:15:52] -rw------- 1 boinc boinc       357 Jun  6 01:15 output.list
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc       620 Jun  6 01:15 runtime_log
[2025-06-06 01:15:52] -rw------- 1 boinc boinc   1259520 Jun  6 01:15 result.tar.gz
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc      9026 Jun  6 01:15 runtime_log.err
[2025-06-06 01:15:52] -rw------- 1 boinc boinc       665 Jun  6 01:15 TqwKDmPllg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5llKDmexV5In.diag
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc      8192 Jun  6 01:15 boinc_mmap_file
[2025-06-06 01:15:52] -rw-r--r-- 1 boinc boinc     20960 Jun  6 01:15 stderr.txt
[2025-06-06 01:15:52] HITS file was successfully produced:
[2025-06-06 01:15:52] -rw------- 1 boinc boinc 179676094 Jun  6 01:14 shared/HITS.pool.root.1
[2025-06-06 01:15:52]  *** Contents of shared directory: ***
[2025-06-06 01:15:52] total 384852
[2025-06-06 01:15:52] -rw-r--r-- 2 boinc boinc 212610329 Jun  5 22:26 ATLAS.root_0
[2025-06-06 01:15:52] -rw-r--r-- 2 boinc boinc     15093 Jun  5 22:26 start_atlas.sh
[2025-06-06 01:15:52] -rw-r--r-- 2 boinc boinc    508871 Jun  5 22:26 input.tar.gz
[2025-06-06 01:15:52] -rw------- 1 boinc boinc 179676094 Jun  6 01:14 HITS.pool.root.1
[2025-06-06 01:15:52] -rw------- 1 boinc boinc   1259520 Jun  6 01:15 result.tar.gz
01:15:53 (3590742): run_atlas exited; CPU time 39050.501650
01:15:53 (3590742): called boinc_finish(0)

</stderr_txt>
]]>

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