Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:12:53 (1201983): wrapper (7.7.26015): starting
10:12:53 (1201983): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 10:12:53] Arguments: --nthreads 4
[2025-06-04 10:12:53] Threads: 4
[2025-06-04 10:12:53] Checking for CVMFS
[2025-06-04 10:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:12:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:12:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:12:53] 2.9.2.0 312665 2261 94200 146772 1 56 30006509 36864001 0 130560 0 2385844 99.994 524520 31075 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 10:12:53] CVMFS is ok
[2025-06-04 10:12:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:12:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:12:53] Further information can be found at the LHC@home message board.
[2025-06-04 10:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:12:53] Checking for apptainer binary...
[2025-06-04 10:12:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:12:53] Running /usr/bin/apptainer --version
[2025-06-04 10:12:53] apptainer version 1.3.6-6.1
[2025-06-04 10:12:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:12:53] thA383a
[2025-06-04 10:12:53] apptainer works
[2025-06-04 10:12:53] Set ATHENA_PROC_NUMBER=4
[2025-06-04 10:12:53] Set ATHENA_CORE_NUMBER=4
[2025-06-04 10:12:53] Starting ATLAS job with PandaID=6677921452
[2025-06-04 10:12:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:17:38]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:17:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:17:38]  is_altstaged=None
[2025-06-04 11:17:38]  is_tar=False
[2025-06-04 11:17:38]  lfn=log.45006595._042663.job.log.tgz.1
[2025-06-04 11:17:38]  mtime=0
[2025-06-04 11:17:38]  protocol_id=None
[2025-06-04 11:17:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:17:38]  replicas=None
[2025-06-04 11:17:38]  scope=mc23_13p6TeV
[2025-06-04 11:17:38]  status=None
[2025-06-04 11:17:38]  status_code=0
[2025-06-04 11:17:38]  storage_token=
[2025-06-04 11:17:38]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677921452/log.45006595._042663.job.log.tgz.1
[2025-06-04 11:17:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/d9/log.45006595._042663.job.log.tgz.1
[2025-06-04 11:17:38]  workdir=None
[2025-06-04 11:17:38] ]
[2025-06-04 11:17:38] 2025-06-04 09:17:17,698 | INFO     | transferring file log.45006595._042663.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677921452/log.45006595._042663.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 11:17:38] 2025-06-04 09:17:17,698 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677921452/log.45006595._042663.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0426
[2025-06-04 11:17:38] 2025-06-04 09:17:17,717 | INFO     | adding to output.list: log.45006595._042663.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/d9/log.45006595._042663.job.log.tg
[2025-06-04 11:17:38] 2025-06-04 09:17:17,718 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:17:38] 2025-06-04 09:17:17,718 | INFO     | summary of transferred files:
[2025-06-04 11:17:38] 2025-06-04 09:17:17,718 | INFO     |  -- lfn=log.45006595._042663.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:17:38] 2025-06-04 09:17:17,718 | INFO     | stage-out finished correctly
[2025-06-04 11:17:38] 2025-06-04 09:17:18,143 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:17:38] 2025-06-04 09:17:19,260 | INFO     | monitor loop #299: job 0:6677921452 is in state 'finished'
[2025-06-04 11:17:38] 2025-06-04 09:17:19,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:17:38] 2025-06-04 09:17:20,245 | INFO     | job 6677921452 has state=finished
[2025-06-04 11:17:38] 2025-06-04 09:17:20,245 | INFO     | preparing for final server update for job 6677921452 in state='finished'
[2025-06-04 11:17:38] 2025-06-04 09:17:20,817 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 11:17:38] 2025-06-04 09:17:20,817 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:17:38] 2025-06-04 09:17:20,817 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:17:38] 2025-06-04 09:17:20,817 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:17:38] 2025-06-04 09:17:20,817 | INFO     | job 6677921452 has finished - writing final server update
[2025-06-04 11:17:38] 2025-06-04 09:17:20,818 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:17:38] 2025-06-04 09:17:20,820 | INFO     | executing command: lscpu
[2025-06-04 11:17:38] 2025-06-04 09:17:20,843 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:17:38] 2025-06-04 09:17:21,763 | INFO     | monitor loop #300: job 0:6677921452 is in state 'finished'
[2025-06-04 11:17:38] 2025-06-04 09:17:21,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:17:38] 2025-06-04 09:17:23,009 | INFO     | 3862s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 11:17:38] 2025-06-04 09:17:24,266 | INFO     | monitor loop #301: job 0:6677921452 is in state 'finished'
[2025-06-04 11:17:38] 2025-06-04 09:17:24,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:17:38] 2025-06-04 09:17:24,318 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:17:38] 2025-06-04 09:17:24,319 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677921452/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:17:38] 2025-06-04 09:17:24,319 | INFO     | extracted standard info from prmon json
[2025-06-04 11:17:38] 2025-06-04 09:17:24,319 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:17:38] 2025-06-04 09:17:24,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:17:38] 2025-06-04 09:17:24,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:17:38] 2025-06-04 09:17:24,319 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:17:38] 2025-06-04 09:17:24,320 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:17:38] 2025-06-04 09:17:24,320 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 11:17:38] 2025-06-04 09:17:24,320 | INFO     | sum of deviations: -1476359332.0
[2025-06-04 11:17:38] 2025-06-04 09:17:24,320 | INFO     | mean x: 1749026787.5
[2025-06-04 11:17:38] 2025-06-04 09:17:24,320 | INFO     | mean y: 2429118.964285714
[2025-06-04 11:17:38] 2025-06-04 09:17:24,320 | INFO     | -- intersect: 47435859993.61995
[2025-06-04 11:17:38] 2025-06-04 09:17:24,320 | INFO     | intersect: 47435859993.61995
[2025-06-04 11:17:38] 2025-06-04 09:17:24,320 | INFO     | chi2: 0.04506367773735581
[2025-06-04 11:17:38] 2025-06-04 09:17:24,320 | INFO     | -- intersect: 47435859993.61995
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | current memory leak: -27.12 B/s (using 56 data points, chi2=0.05)
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | ..............................
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | . Timing measurements:
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | . get job = 0 s
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | . initial setup = 1 s
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | . payload setup = 5 s
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | . stage-in = 0 s
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | . payload execution = 3832 s
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | . stage-out = 0 s
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | . log creation = 0 s
[2025-06-04 11:17:38] 2025-06-04 09:17:24,321 | INFO     | ..............................
[2025-06-04 11:17:38] 2025-06-04 09:17:24,362 | INFO     | 
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | job summary report
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | --------------------------------------------------
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | PanDA job id: 6677921452
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | task id: 45006595
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | errors: (none)
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | pilot state: finished 
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | transexitcode: 0
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | exeerrorcode: 0
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | exeerrordiag: 
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | exitcode: 0
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | exitmsg: OK
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | cpuconsumptiontime: 14383 s
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | nevents: 400
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | neventsw: 0
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | pid: 1212377
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | pgrp: 1212377
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | corecount: 4
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | event service: False
[2025-06-04 11:17:38] 2025-06-04 09:17:24,363 | INFO     | sizes: {0: 2405016, 1: 2405215, 4: 2405421, 11: 2405449, 3841: 2431241, 3842: 2440372, 3848: 2440486}
[2025-06-04 11:17:38] 2025-06-04 09:17:24,364 | INFO     | --------------------------------------------------
[2025-06-04 11:17:38] 2025-06-04 09:17:24,364 | INFO     | 
[2025-06-04 11:17:38] 2025-06-04 09:17:24,364 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:17:38] 2025-06-04 09:17:24,384 | INFO     | job 6677921452 has completed (purged errors)
[2025-06-04 11:17:38] 2025-06-04 09:17:24,385 | INFO     | overall cleanup function is called
[2025-06-04 11:17:38] 2025-06-04 09:17:25,391 | INFO     | --- collectZombieJob: --- 10, [1212377]
[2025-06-04 11:17:38] 2025-06-04 09:17:25,392 | INFO     | zombie collector waiting for pid 1212377
[2025-06-04 11:17:38] 2025-06-04 09:17:25,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:17:38] 2025-06-04 09:17:25,392 | INFO     | collected zombie processes
[2025-06-04 11:17:38] 2025-06-04 09:17:25,392 | INFO     | will attempt to kill all subprocesses of pid=1212377
[2025-06-04 11:17:38] 2025-06-04 09:17:25,437 | INFO     | process IDs to be killed: [1212377] (in reverse order)
[2025-06-04 11:17:38] 2025-06-04 09:17:25,472 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:17:38] 2025-06-04 09:17:25,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:17:38] 2025-06-04 09:17:25,474 | INFO     | did not find any defunct processes belonging to 1212377
[2025-06-04 11:17:38] 2025-06-04 09:17:25,475 | INFO     | did not find any defunct processes belonging to 1212377
[2025-06-04 11:17:38] 2025-06-04 09:17:25,476 | INFO     | ready for new job
[2025-06-04 11:17:38] 2025-06-04 09:17:25,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:17:38] 2025-06-04 09:17:25,476 | INFO     | **************************************
[2025-06-04 11:17:38] 2025-06-04 09:17:25,476 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:17:38] 2025-06-04 09:17:25,476 | INFO     | **************************************
[2025-06-04 11:17:38] 2025-06-04 09:17:25,476 | INFO     | 
[2025-06-04 11:17:38] 2025-06-04 09:17:25,477 | INFO     | architecture information:
[2025-06-04 11:17:38] 2025-06-04 09:17:25,477 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:17:38] 2025-06-04 09:17:25,492 | INFO     | cat /etc/os-release:
[2025-06-04 11:17:38] NAME="CentOS Linux"
[2025-06-04 11:17:38] VERSION="7 (Core)"
[2025-06-04 11:17:38] ID="centos"
[2025-06-04 11:17:38] ID_LIKE="rhel fedora"
[2025-06-04 11:17:38] VERSION_ID="7"
[2025-06-04 11:17:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:17:38] ANSI_COLOR="0;31"
[2025-06-04 11:17:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:17:38] HOME_URL="https://www.centos.org/"
[2025-06-04 11:17:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:17:38] 
[2025-06-04 11:17:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:17:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:17:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:17:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:17:38] 
[2025-06-04 11:17:38] 2025-06-04 09:17:25,492 | INFO     | **************************************
[2025-06-04 11:17:38] 2025-06-04 09:17:25,995 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 11:17:38] 2025-06-04 09:17:26,013 | INFO     | sufficient remaining disk space (225119830016 B)
[2025-06-04 11:17:38] 2025-06-04 09:17:26,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:17:38] 2025-06-04 09:17:26,014 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:17:38] 2025-06-04 09:17:26,014 | INFO     | update_server=False
[2025-06-04 11:17:38] 2025-06-04 09:17:26,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:17:38] 2025-06-04 09:17:26,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:17:38] 2025-06-04 09:17:26,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:17:38] 2025-06-04 09:17:26,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:17:38] 2025-06-04 09:17:26,014 | INFO     | aborting loop
[2025-06-04 11:17:38] 2025-06-04 09:17:26,020 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:17:38] 2025-06-04 09:17:26,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:17:38] 2025-06-04 09:17:26,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:17:38] 2025-06-04 09:17:26,059 | INFO     | all payload control threads have been joined
[2025-06-04 11:17:38] 2025-06-04 09:17:26,425 | INFO     | all data control threads have been joined
[2025-06-04 11:17:38] 2025-06-04 09:17:26,590 | INFO     | all job control threads have been joined
[2025-06-04 11:17:38] 2025-06-04 09:17:27,019 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,020 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,020 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,064 | INFO     | [payload] control thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,104 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,333 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,431 | INFO     | [data] control thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,550 | INFO     | [job] validate thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,596 | INFO     | [job] control thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,673 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:27,953 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:28,020 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:28,272 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:28,362 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:28,563 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:28,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:17:38] 2025-06-04 09:17:32,704 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:17:38] 2025-06-04 09:17:33,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140665951352640)>', '<ExcThread(monitor, started 140664834598656)>']
[2025-06-04 11:17:38] 2025-06-04 09:17:33,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:17:38] 2025-06-04 09:17:33,058 | INFO     | [monitor] control thread has ended
[2025-06-04 11:17:38] 2025-06-04 09:17:38,071 | INFO     | all workflow threads have been joined
[2025-06-04 11:17:38] 2025-06-04 09:17:38,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:17:38] 2025-06-04 09:17:38,071 | INFO     | traces error code: 0
[2025-06-04 11:17:38] 2025-06-04 09:17:38,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:17:38] 2025-06-04 09:17:38,149 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:17:38] 2025-06-04 09:17:38,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:17:38] 2025-06-04 09:17:38,158 [wrapper] pilotpid: 1205703
[2025-06-04 11:17:38] 2025-06-04 09:17:38,161 [wrapper] Pilot exit status: 0
[2025-06-04 11:17:38] 2025-06-04 09:17:38,174 [wrapper] pandaids: 6677921452
[2025-06-04 11:17:38] 2025-06-04 09:17:38,198 [wrapper] cleanup supervisor_pilot 1222055 1205704
[2025-06-04 11:17:38] 2025-06-04 09:17:38,202 [wrapper] Test setup, not cleaning
[2025-06-04 11:17:38] 2025-06-04 09:17:38,206 [wrapper] apfmon messages muted
[2025-06-04 11:17:38] 2025-06-04 09:17:38,210 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:17:38] 2025-06-04 09:17:38,214 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:17:38]  *** Error codes and diagnostics ***
[2025-06-04 11:17:38]     "exeErrorCode": 0,
[2025-06-04 11:17:38]     "exeErrorDiag": "",
[2025-06-04 11:17:38]     "pilotErrorCode": 0,
[2025-06-04 11:17:38]     "pilotErrorDiag": "",
[2025-06-04 11:17:38]  *** Listing of results directory ***
[2025-06-04 11:17:38] total 391528
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:37 queuedata.json
[2025-06-04 11:17:38] -rwx------ 1 boinc boinc     37140 Jun  3 20:38 runpilot2-wrapper.sh
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc       100 Jun  4 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:17:38] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 10:12 run_atlas
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc       105 Jun  4 10:12 job.xml
[2025-06-04 11:17:38] -rw-r--r-- 2 boinc boinc 215953669 Jun  4 10:12 EVNT.45006593._001711.pool.root.1
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc      6861 Jun  4 10:12 init_data.xml
[2025-06-04 11:17:38] drwxrwx--x 2 boinc boinc      4096 Jun  4 10:12 shared
[2025-06-04 11:17:38] -rw-r--r-- 2 boinc boinc    508881 Jun  4 10:12 input.tar.gz
[2025-06-04 11:17:38] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:12 start_atlas.sh
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc         0 Jun  4 10:12 boinc_lockfile
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc      2525 Jun  4 10:12 pandaJob.out
[2025-06-04 11:17:38] -rw------- 1 boinc boinc    986745 Jun  4 10:13 agis_schedconf.cvmfs.json
[2025-06-04 11:17:38] -rw------- 1 boinc boinc   1603667 Jun  4 10:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:17:38] drwx------ 4 boinc boinc      4096 Jun  4 10:13 pilot3
[2025-06-04 11:17:38] -rw------- 1 boinc boinc 179877421 Jun  4 11:16 HITS.45006595._042663.pool.root.1
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc       529 Jun  4 11:17 boinc_task_state.xml
[2025-06-04 11:17:38] -rw------- 1 boinc boinc      1025 Jun  4 11:17 memory_monitor_summary.json
[2025-06-04 11:17:38] -rw------- 1 boinc boinc    240434 Jun  4 11:17 log.45006595._042663.job.log.tgz.1
[2025-06-04 11:17:38] -rw------- 1 boinc boinc        95 Jun  4 11:17 pilot_heartbeat.json
[2025-06-04 11:17:38] -rw------- 1 boinc boinc      7665 Jun  4 11:17 heartbeat.json
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc      8192 Jun  4 11:17 boinc_mmap_file
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc        27 Jun  4 11:17 wrapper_checkpoint.txt
[2025-06-04 11:17:38] -rw------- 1 boinc boinc      4357 Jun  4 11:17 pilotlog.txt
[2025-06-04 11:17:38] -rw------- 1 boinc boinc    387372 Jun  4 11:17 log.45006595._042663.job.log.1
[2025-06-04 11:17:38] -rw------- 1 boinc boinc       357 Jun  4 11:17 output.list
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc       620 Jun  4 11:17 runtime_log
[2025-06-04 11:17:38] -rw------- 1 boinc boinc    645120 Jun  4 11:17 result.tar.gz
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc      8738 Jun  4 11:17 runtime_log.err
[2025-06-04 11:17:38] -rw------- 1 boinc boinc       659 Jun  4 11:17 0OdKDmJilg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEbZKDmioTZOn.diag
[2025-06-04 11:17:38] -rw-r--r-- 1 boinc boinc     21356 Jun  4 11:17 stderr.txt
[2025-06-04 11:17:38] HITS file was successfully produced:
[2025-06-04 11:17:38] -rw------- 1 boinc boinc 179877421 Jun  4 11:16 shared/HITS.pool.root.1
[2025-06-04 11:17:38]  *** Contents of shared directory: ***
[2025-06-04 11:17:38] total 387716
[2025-06-04 11:17:38] -rw-r--r-- 2 boinc boinc 215953669 Jun  4 10:12 ATLAS.root_0
[2025-06-04 11:17:38] -rw-r--r-- 2 boinc boinc    508881 Jun  4 10:12 input.tar.gz
[2025-06-04 11:17:38] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:12 start_atlas.sh
[2025-06-04 11:17:38] -rw------- 1 boinc boinc 179877421 Jun  4 11:16 HITS.pool.root.1
[2025-06-04 11:17:38] -rw------- 1 boinc boinc    645120 Jun  4 11:17 result.tar.gz
11:17:40 (1201983): run_atlas exited; CPU time 14391.490196
11:17:40 (1201983): called boinc_finish(0)

</stderr_txt>
]]>

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