Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:16:02 (3918282): wrapper (7.7.26015): starting
01:16:02 (3918282): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 01:16:02] Arguments: --nthreads 4
[2025-06-06 01:16:02] Threads: 4
[2025-06-06 01:16:02] Checking for CVMFS
[2025-06-06 01:16:02] No cvmfs_config command found, will try listing directly
[2025-06-06 01:16:02] CVMFS is ok
[2025-06-06 01:16:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 01:16:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 01:16:02] Further information can be found at the LHC@home message board.
[2025-06-06 01:16:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 01:16:02] Checking for apptainer binary...
[2025-06-06 01:16:02] which: no apptainer in ((null))
[2025-06-06 01:16:02] apptainer is not installed, using version from CVMFS
[2025-06-06 01:16:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 01:16:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-06 01:16:03] apptainer works
[2025-06-06 01:16:03] Set ATHENA_PROC_NUMBER=4
[2025-06-06 01:16:03] Set ATHENA_CORE_NUMBER=4
[2025-06-06 01:16:03] Starting ATLAS job with PandaID=6677786666
[2025-06-06 01:16:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 04:05:26]  *** The last 200 lines of the pilot log: ***
[2025-06-06 04:05:26] 2025-06-06 02:03:52,804 | INFO     | -- intersect: 13181136005.040829
[2025-06-06 04:05:26] 2025-06-06 02:03:52,804 | INFO     | intersect: 13181136005.040829
[2025-06-06 04:05:26] 2025-06-06 02:03:52,804 | INFO     | chi2: 2.390298910846466
[2025-06-06 04:05:26] 2025-06-06 02:03:52,805 | INFO     | sum of square deviations: 1270051720.0
[2025-06-06 04:05:26] 2025-06-06 02:03:52,805 | INFO     | sum of deviations: 282022062.5000028
[2025-06-06 04:05:26] 2025-06-06 02:03:52,806 | INFO     | mean x: 1749170249.5
[2025-06-06 04:05:26] 2025-06-06 02:03:52,806 | INFO     | mean y: 2348897.30625
[2025-06-06 04:05:26] 2025-06-06 02:03:52,806 | INFO     | -- intersect: -386064104.82537544
[2025-06-06 04:05:26] 2025-06-06 02:03:52,806 | INFO     | intersect: -386064104.82537544
[2025-06-06 04:05:26] 2025-06-06 02:03:52,806 | INFO     | chi2: 1.593294313270804
[2025-06-06 04:05:26] 2025-06-06 02:03:52,806 | INFO     | current chi2=1.593294313270804 (change=33.3433025450956 %)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,807 | INFO     | sum of square deviations: 1154663510.0
[2025-06-06 04:05:26] 2025-06-06 02:03:52,807 | INFO     | sum of deviations: 521537860.9999966
[2025-06-06 04:05:26] 2025-06-06 02:03:52,808 | INFO     | mean x: 1749170097.0
[2025-06-06 04:05:26] 2025-06-06 02:03:52,808 | INFO     | mean y: 2349214.0258064517
[2025-06-06 04:05:26] 2025-06-06 02:03:52,808 | INFO     | -- intersect: -787715097.3635234
[2025-06-06 04:05:26] 2025-06-06 02:03:52,808 | INFO     | intersect: -787715097.3635234
[2025-06-06 04:05:26] 2025-06-06 02:03:52,809 | INFO     | chi2: 1.5940886811718602
[2025-06-06 04:05:26] 2025-06-06 02:03:52,809 | INFO     | current chi2=1.5940886811718602 (change=-0.049856946983355806 %)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,809 | INFO     | right removable region: 154
[2025-06-06 04:05:26] 2025-06-06 02:03:52,809 | INFO     | sum of square deviations: 1270051720.0
[2025-06-06 04:05:26] 2025-06-06 02:03:52,810 | INFO     | sum of deviations: -35535738490.0
[2025-06-06 04:05:26] 2025-06-06 02:03:52,810 | INFO     | mean x: 1749170554.5
[2025-06-06 04:05:26] 2025-06-06 02:03:52,810 | INFO     | mean y: 2366554.05
[2025-06-06 04:05:26] 2025-06-06 02:03:52,810 | INFO     | -- intersect: 48943733602.56697
[2025-06-06 04:05:26] 2025-06-06 02:03:52,811 | INFO     | intersect: 48943733602.56697
[2025-06-06 04:05:26] 2025-06-06 02:03:52,811 | INFO     | chi2: 0.8895341733402577
[2025-06-06 04:05:26] 2025-06-06 02:03:52,811 | INFO     | current chi2=0.8895341733402577 (change=62.78565122948364 %)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,811 | INFO     | sum of square deviations: 1154663510.0
[2025-06-06 04:05:26] 2025-06-06 02:03:52,812 | INFO     | sum of deviations: -33406163402.999992
[2025-06-06 04:05:26] 2025-06-06 02:03:52,812 | INFO     | mean x: 1749170707.0
[2025-06-06 04:05:26] 2025-06-06 02:03:52,812 | INFO     | mean y: 2363713.129032258
[2025-06-06 04:05:26] 2025-06-06 02:03:52,812 | INFO     | -- intersect: 50608520356.793144
[2025-06-06 04:05:26] 2025-06-06 02:03:52,813 | INFO     | intersect: 50608520356.793144
[2025-06-06 04:05:26] 2025-06-06 02:03:52,813 | INFO     | chi2: 0.8872207366383662
[2025-06-06 04:05:26] 2025-06-06 02:03:52,813 | INFO     | current chi2=0.8872207366383662 (change=0.2600728303899157 %)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,813 | INFO     | left removable region: 20
[2025-06-06 04:05:26] 2025-06-06 02:03:52,813 | INFO     | sum of square deviations: 746051197.5
[2025-06-06 04:05:26] 2025-06-06 02:03:52,814 | INFO     | sum of deviations: -16061246503.0
[2025-06-06 04:05:26] 2025-06-06 02:03:52,814 | INFO     | mean x: 1749170676.5
[2025-06-06 04:05:26] 2025-06-06 02:03:52,814 | INFO     | mean y: 2370915.2835820895
[2025-06-06 04:05:26] 2025-06-06 02:03:52,814 | INFO     | -- intersect: 37659118207.1955
[2025-06-06 04:05:26] 2025-06-06 02:03:52,815 | INFO     | intersect: 37659118207.1955
[2025-06-06 04:05:26] 2025-06-06 02:03:52,815 | INFO     | chi2: 0.05094984244295944
[2025-06-06 04:05:26] 2025-06-06 02:03:52,815 | INFO     | -- intersect: 37659118207.1955
[2025-06-06 04:05:26] 2025-06-06 02:03:52,815 | INFO     | current memory leak: -21.53 B/s (using 134 data points, chi2=0.05)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,816 | INFO     | sufficient remaining disk space (642018967552 B)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,816 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,817 | INFO     | ..............................
[2025-06-06 04:05:26] 2025-06-06 02:03:52,817 | INFO     | . Timing measurements:
[2025-06-06 04:05:26] 2025-06-06 02:03:52,817 | INFO     | . get job = 0 s
[2025-06-06 04:05:26] 2025-06-06 02:03:52,817 | INFO     | . initial setup = 1 s
[2025-06-06 04:05:26] 2025-06-06 02:03:52,817 | INFO     | . payload setup = 6 s
[2025-06-06 04:05:26] 2025-06-06 02:03:52,817 | INFO     | . stage-in = 0 s
[2025-06-06 04:05:26] 2025-06-06 02:03:52,818 | INFO     | . payload execution = 10026 s
[2025-06-06 04:05:26] 2025-06-06 02:03:52,818 | INFO     | . stage-out = 0 s
[2025-06-06 04:05:26] 2025-06-06 02:03:52,818 | INFO     | . log creation = 0 s
[2025-06-06 04:05:26] 2025-06-06 02:03:52,818 | INFO     | ..............................
[2025-06-06 04:05:26] 2025-06-06 02:03:52,897 | INFO     | size of work directory /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6677786666: 3170738 B (within 2537553920 B limit)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,927 | INFO     | pfn file=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6677786666/HITS.45006595._039983.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,927 | INFO     | total size of present files: 0 B (workdir size: 3170738 B)
[2025-06-06 04:05:26] 2025-06-06 02:03:52,927 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6677786666/HITS.45006595._039983.pool.root.1 since it does not exist
[2025-06-06 04:05:26] 2025-06-06 02:03:53,262 | INFO     | number of running child processes to parent process 3929322: 1
[2025-06-06 04:05:26] 2025-06-06 02:03:53,262 | INFO     | maximum number of monitored processes: 6
[2025-06-06 04:05:26] 2025-06-06 02:03:53,262 | INFO     | aborting job monitoring since job object (job id=6677786666) has expired
[2025-06-06 04:05:26] 2025-06-06 02:03:53,347 | INFO     | 
[2025-06-06 04:05:26] 2025-06-06 02:03:53,348 | INFO     | job summary report
[2025-06-06 04:05:26] 2025-06-06 02:03:53,348 | INFO     | --------------------------------------------------
[2025-06-06 04:05:26] 2025-06-06 02:03:53,348 | INFO     | PanDA job id: 6677786666
[2025-06-06 04:05:26] 2025-06-06 02:03:53,348 | INFO     | task id: 45006595
[2025-06-06 04:05:26] 2025-06-06 02:03:53,348 | INFO     | errors: (none)
[2025-06-06 04:05:26] 2025-06-06 02:03:53,348 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 04:05:26] 2025-06-06 02:03:53,348 | INFO     | pilot state: finished 
[2025-06-06 04:05:26] 2025-06-06 02:03:53,348 | INFO     | transexitcode: 0
[2025-06-06 04:05:26] 2025-06-06 02:03:53,348 | INFO     | exeerrorcode: 0
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | exeerrordiag: 
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | exitcode: 0
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | exitmsg: OK
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | cpuconsumptiontime: 38289 s
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | nevents: 400
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | neventsw: 0
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | pid: 3929322
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | pgrp: 3929322
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | corecount: 4
[2025-06-06 04:05:26] 2025-06-06 02:03:53,349 | INFO     | event service: False
[2025-06-06 04:05:26] 2025-06-06 02:03:53,350 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 12: 2397643, 10037: 2425960, 10039: 2435107, 10044: 2435221}
[2025-06-06 04:05:26] 2025-06-06 02:03:53,350 | INFO     | --------------------------------------------------
[2025-06-06 04:05:26] 2025-06-06 02:03:53,350 | INFO     | 
[2025-06-06 04:05:26] 2025-06-06 02:03:53,350 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-06 04:05:26] 2025-06-06 02:03:53,372 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,374 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 04:05:26] 2025-06-06 02:03:53,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 04:05:26] 2025-06-06 02:03:53,375 | INFO     | job 6677786666 has completed (purged errors)
[2025-06-06 04:05:26] 2025-06-06 02:03:53,375 | INFO     | overall cleanup function is called
[2025-06-06 04:05:26] 2025-06-06 02:03:54,384 | INFO     | --- collectZombieJob: --- 10, [3929322]
[2025-06-06 04:05:26] 2025-06-06 02:03:54,384 | INFO     | zombie collector waiting for pid 3929322
[2025-06-06 04:05:26] 2025-06-06 02:03:54,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 04:05:26] 2025-06-06 02:03:54,385 | INFO     | collected zombie processes
[2025-06-06 04:05:26] 2025-06-06 02:03:54,385 | INFO     | will attempt to kill all subprocesses of pid=3929322
[2025-06-06 04:05:26] 2025-06-06 02:03:54,714 | INFO     | process IDs to be killed: [3929322] (in reverse order)
[2025-06-06 04:05:26] 2025-06-06 02:03:54,823 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 04:05:26] 2025-06-06 02:03:54,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 04:05:26] 2025-06-06 02:03:54,835 | INFO     | did not find any defunct processes belonging to 3929322
[2025-06-06 04:05:26] 2025-06-06 02:03:54,845 | INFO     | did not find any defunct processes belonging to 3929322
[2025-06-06 04:05:26] 2025-06-06 02:03:54,845 | INFO     | ready for new job
[2025-06-06 04:05:26] 2025-06-06 02:03:54,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 04:05:26] 2025-06-06 02:03:54,847 | INFO     | **************************************
[2025-06-06 04:05:26] 2025-06-06 02:03:54,847 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 04:05:26] 2025-06-06 02:03:54,847 | INFO     | **************************************
[2025-06-06 04:05:26] 2025-06-06 02:03:54,847 | INFO     | 
[2025-06-06 04:05:26] 2025-06-06 02:03:54,851 | INFO     | architecture information:
[2025-06-06 04:05:26] 2025-06-06 02:03:54,852 | INFO     | executing command: cat /etc/os-release
[2025-06-06 04:05:26] 2025-06-06 02:03:54,868 | INFO     | cat /etc/os-release:
[2025-06-06 04:05:26] NAME="CentOS Linux"
[2025-06-06 04:05:26] VERSION="7 (Core)"
[2025-06-06 04:05:26] ID="centos"
[2025-06-06 04:05:26] ID_LIKE="rhel fedora"
[2025-06-06 04:05:26] VERSION_ID="7"
[2025-06-06 04:05:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 04:05:26] ANSI_COLOR="0;31"
[2025-06-06 04:05:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 04:05:26] HOME_URL="https://www.centos.org/"
[2025-06-06 04:05:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 04:05:26] 
[2025-06-06 04:05:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 04:05:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 04:05:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 04:05:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 04:05:26] 
[2025-06-06 04:05:26] 2025-06-06 02:03:54,869 | INFO     | **************************************
[2025-06-06 04:05:26] 2025-06-06 02:03:55,371 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-06 04:05:26] 2025-06-06 02:03:55,388 | INFO     | sufficient remaining disk space (642023161856 B)
[2025-06-06 04:05:26] 2025-06-06 02:03:55,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 04:05:26] 2025-06-06 02:03:55,389 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 04:05:26] 2025-06-06 02:03:55,389 | INFO     | update_server=False
[2025-06-06 04:05:26] 2025-06-06 02:03:55,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 04:05:26] 2025-06-06 02:03:55,389 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 04:05:26] 2025-06-06 02:03:55,390 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 04:05:26] 2025-06-06 02:03:55,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 04:05:26] 2025-06-06 02:03:55,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 04:05:26] 2025-06-06 02:03:55,698 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 04:05:26] 2025-06-06 02:03:55,765 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 04:05:26] 2025-06-06 02:03:55,765 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 04:05:26] 2025-06-06 02:03:55,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:05:26] 2025-06-06 02:03:55,766 | INFO     | will abort loop
[2025-06-06 04:05:26] 2025-06-06 02:03:55,815 | INFO     | all payload control threads have been joined
[2025-06-06 04:05:26] 2025-06-06 02:03:55,928 | INFO     | all data control threads have been joined
[2025-06-06 04:05:26] 2025-06-06 02:03:56,016 | INFO     | all job control threads have been joined
[2025-06-06 04:05:26] 2025-06-06 02:03:56,395 | INFO     | [job] retrieve thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:56,644 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:56,771 | INFO     | [job] job monitor thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:56,819 | INFO     | [payload] control thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:56,933 | INFO     | [data] control thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:56,984 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:57,022 | INFO     | [job] control thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:57,216 | INFO     | [job] validate thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:57,357 | INFO     | [data] copytool_in thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:57,676 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:57,703 | INFO     | [data] copytool_out thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:57,726 | INFO     | [payload] failed_post thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:57,743 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:57,825 | INFO     | [payload] validate_post thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:03:57,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:05:26] 2025-06-06 02:03:58,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 04:05:26] 2025-06-06 02:03:58,942 | INFO     | [job] queue monitor thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:04:02,789 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 04:05:26] 2025-06-06 02:04:04,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22623464310592)>', '<ExcThread(monitor, started 22623209588480)>']
[2025-06-06 04:05:26] 2025-06-06 02:04:05,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 04:05:26] 2025-06-06 02:04:05,436 | INFO     | [monitor] control thread has ended
[2025-06-06 04:05:26] 2025-06-06 02:04:09,576 | INFO     | all workflow threads have been joined
[2025-06-06 04:05:26] 2025-06-06 02:04:09,576 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 04:05:26] 2025-06-06 02:04:09,577 | INFO     | traces error code: 0
[2025-06-06 04:05:26] 2025-06-06 02:04:09,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 04:05:26] 2025-06-06 02:04:09,743 [wrapper] ==== pilot stdout END ====
[2025-06-06 04:05:26] 2025-06-06 02:04:09,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 04:05:26] 2025-06-06 02:04:09,749 [wrapper] pilotpid: 3921991
[2025-06-06 04:05:26] 2025-06-06 02:04:09,751 [wrapper] Pilot exit status: 0
[2025-06-06 04:05:26] 2025-06-06 02:04:09,761 [wrapper] pandaids: 6677786666
[2025-06-06 04:05:26] 2025-06-06 02:04:09,835 [wrapper] cleanup supervisor_pilot   28720 3921992
[2025-06-06 04:05:26] 2025-06-06 02:04:09,837 [wrapper] Test setup, not cleaning
[2025-06-06 04:05:26] 2025-06-06 02:04:09,840 [wrapper] apfmon messages muted
[2025-06-06 04:05:26] 2025-06-06 02:04:09,843 [wrapper] ==== wrapper stdout END ====
[2025-06-06 04:05:26] 2025-06-06 02:04:09,846 [wrapper] ==== wrapper stderr END ====
[2025-06-06 04:05:26]  *** Error codes and diagnostics ***
[2025-06-06 04:05:26]     "exeErrorCode": 0,
[2025-06-06 04:05:26]     "exeErrorDiag": "",
[2025-06-06 04:05:26]     "pilotErrorCode": 0,
[2025-06-06 04:05:26]     "pilotErrorDiag": "",
[2025-06-06 04:05:26]  *** Listing of results directory ***
[2025-06-06 04:05:26] total 395764
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-06 04:05:26] -rwx------ 1 boinc boinc     37140 Jun  3 19:15 runpilot2-wrapper.sh
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:15 queuedata.json
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc       100 Jun  6 01:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 04:05:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 01:15 run_atlas
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc       105 Jun  6 01:15 job.xml
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc      6636 Jun  6 01:16 init_data.xml
[2025-06-06 04:05:26] -rw-r--r-- 2 boinc boinc 218175080 Jun  6 01:16 EVNT.45006593._001603.pool.root.1
[2025-06-06 04:05:26] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:16 start_atlas.sh
[2025-06-06 04:05:26] drwxrwx--x 2 boinc boinc      4096 Jun  6 01:16 shared
[2025-06-06 04:05:26] -rw-r--r-- 2 boinc boinc    508878 Jun  6 01:16 input.tar.gz
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc         0 Jun  6 01:16 boinc_lockfile
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc      2525 Jun  6 01:16 pandaJob.out
[2025-06-06 04:05:26] -rw------- 1 boinc boinc    987721 Jun  6 01:16 agis_schedconf.cvmfs.json
[2025-06-06 04:05:26] -rw------- 1 boinc boinc   1598969 Jun  6 01:16 agis_ddmendpoints.agis.ALL.json
[2025-06-06 04:05:26] drwx------ 4 boinc boinc      4096 Jun  6 01:16 pilot3
[2025-06-06 04:05:26] -rw------- 1 boinc boinc        95 Jun  6 04:03 pilot_heartbeat.json
[2025-06-06 04:05:26] -rw------- 1 boinc boinc 180728423 Jun  6 04:03 HITS.45006595._039983.pool.root.1
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc       529 Jun  6 04:03 boinc_task_state.xml
[2025-06-06 04:05:26] -rw------- 1 boinc boinc      1035 Jun  6 04:03 memory_monitor_summary.json
[2025-06-06 04:05:26] -rw------- 1 boinc boinc    310146 Jun  6 04:03 log.45006595._039983.job.log.tgz.1
[2025-06-06 04:05:26] -rw------- 1 boinc boinc      7726 Jun  6 04:03 heartbeat.json
[2025-06-06 04:05:26] -rw------- 1 boinc boinc      4672 Jun  6 04:04 pilotlog.txt
[2025-06-06 04:05:26] -rw------- 1 boinc boinc    948683 Jun  6 04:04 log.45006595._039983.job.log.1
[2025-06-06 04:05:26] -rw------- 1 boinc boinc       357 Jun  6 04:04 output.list
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc       620 Jun  6 04:04 runtime_log
[2025-06-06 04:05:26] -rw------- 1 boinc boinc   1280000 Jun  6 04:04 result.tar.gz
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc      9026 Jun  6 04:04 runtime_log.err
[2025-06-06 04:05:26] -rw------- 1 boinc boinc       665 Jun  6 04:04 VxJMDmOPkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyGlKDmNQg5Wm.diag
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc        26 Jun  6 04:05 wrapper_checkpoint.txt
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc      8192 Jun  6 04:05 boinc_mmap_file
[2025-06-06 04:05:26] -rw-r--r-- 1 boinc boinc     21065 Jun  6 04:05 stderr.txt
[2025-06-06 04:05:26] HITS file was successfully produced:
[2025-06-06 04:05:26] -rw------- 1 boinc boinc 180728423 Jun  6 04:03 shared/HITS.pool.root.1
[2025-06-06 04:05:26]  *** Contents of shared directory: ***
[2025-06-06 04:05:26] total 391336
[2025-06-06 04:05:26] -rw-r--r-- 2 boinc boinc 218175080 Jun  6 01:16 ATLAS.root_0
[2025-06-06 04:05:26] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:16 start_atlas.sh
[2025-06-06 04:05:26] -rw-r--r-- 2 boinc boinc    508878 Jun  6 01:16 input.tar.gz
[2025-06-06 04:05:26] -rw------- 1 boinc boinc 180728423 Jun  6 04:03 HITS.pool.root.1
[2025-06-06 04:05:26] -rw------- 1 boinc boinc   1280000 Jun  6 04:04 result.tar.gz
04:05:28 (3918282): run_atlas exited; CPU time 38661.869512
04:05:28 (3918282): called boinc_finish(0)

</stderr_txt>
]]>

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