Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:43:34 (797724): wrapper (7.7.26015): starting
11:43:34 (797724): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 11:43:34] Arguments: --nthreads 3
[2025-06-04 11:43:34] Threads: 3
[2025-06-04 11:43:34] Checking for CVMFS
[2025-06-04 11:43:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:43:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:43:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:43:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:43:34] 2.9.2.0 9339 2355 80372 146775 0 56 31348240 36864001 0 130560 0 2139609 99.993 595868 45032 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 11:43:34] CVMFS is ok
[2025-06-04 11:43:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:43:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:43:34] Further information can be found at the LHC@home message board.
[2025-06-04 11:43:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:43:34] Checking for apptainer binary...
[2025-06-04 11:43:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:43:34] Running /usr/bin/apptainer --version
[2025-06-04 11:43:34] apptainer version 1.3.6-6.1
[2025-06-04 11:43:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:43:34] atlasA303a
[2025-06-04 11:43:34] apptainer works
[2025-06-04 11:43:34] Set ATHENA_PROC_NUMBER=3
[2025-06-04 11:43:34] Set ATHENA_CORE_NUMBER=3
[2025-06-04 11:43:34] Starting ATLAS job with PandaID=6678070857
[2025-06-04 11:43:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:56:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:56:19]  status_code=0
[2025-06-04 12:56:19]  storage_token=
[2025-06-04 12:56:19]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678070857/log.45006595._044732.job.log.tgz.1
[2025-06-04 12:56:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/5a/log.45006595._044732.job.log.tgz.1
[2025-06-04 12:56:19]  workdir=None
[2025-06-04 12:56:19] ]
[2025-06-04 12:56:19] 2025-06-04 10:55:54,144 | INFO     | transferring file log.45006595._044732.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678070857/log.45006595._044732.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 12:56:19] 2025-06-04 10:55:54,144 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678070857/log.45006595._044732.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0447
[2025-06-04 12:56:19] 2025-06-04 10:55:54,159 | INFO     | adding to output.list: log.45006595._044732.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/5a/log.45006595._044732.job.log.tg
[2025-06-04 12:56:19] 2025-06-04 10:55:54,159 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:56:19] 2025-06-04 10:55:54,159 | INFO     | summary of transferred files:
[2025-06-04 12:56:19] 2025-06-04 10:55:54,159 | INFO     |  -- lfn=log.45006595._044732.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:56:19] 2025-06-04 10:55:54,159 | INFO     | stage-out finished correctly
[2025-06-04 12:56:19] 2025-06-04 10:55:54,189 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:56:19] 2025-06-04 10:55:55,626 | INFO     | job 6678070857 has state=finished
[2025-06-04 12:56:19] 2025-06-04 10:55:55,626 | INFO     | preparing for final server update for job 6678070857 in state='finished'
[2025-06-04 12:56:19] 2025-06-04 10:55:56,251 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 12:56:19] 2025-06-04 10:55:56,252 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:56:19] 2025-06-04 10:55:56,252 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:56:19] 2025-06-04 10:55:56,252 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:56:19] 2025-06-04 10:55:56,252 | INFO     | job 6678070857 has finished - writing final server update
[2025-06-04 12:56:19] 2025-06-04 10:55:56,252 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:56:19] 2025-06-04 10:55:56,253 | INFO     | executing command: lscpu
[2025-06-04 12:56:19] 2025-06-04 10:55:56,270 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:56:19] 2025-06-04 10:55:57,913 | WARNING  | process 807867 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:56:19] 2025-06-04 10:55:57,913 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678070857/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:56:19] 2025-06-04 10:55:57,914 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678070857/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:56:19] 2025-06-04 10:55:57,914 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2572481 B
[2025-06-04 12:56:19] 2025-06-04 10:55:57,914 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15554 B
[2025-06-04 12:56:19] 2025-06-04 10:55:57,914 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 12:56:19] 2025-06-04 10:55:59,859 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:56:19] 2025-06-04 10:55:59,859 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678070857/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,860 | INFO     | extracted standard info from prmon json
[2025-06-04 12:56:19] 2025-06-04 10:55:59,860 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:56:19] 2025-06-04 10:55:59,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:56:19] 2025-06-04 10:55:59,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:56:19] 2025-06-04 10:55:59,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:56:19] 2025-06-04 10:55:59,863 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | sum of deviations: -9178148267.0
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | mean x: 1749032466.5
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | mean y: 2504458.875
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | -- intersect: 197535948702.83182
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | intersect: 197535948702.83182
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | chi2: 0.036491803976592345
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | -- intersect: 197535948702.83182
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | current memory leak: -112.94 B/s (using 64 data points, chi2=0.04)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | ..............................
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | . Timing measurements:
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | . get job = 0 s
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | . initial setup = 1 s
[2025-06-04 12:56:19] 2025-06-04 10:55:59,864 | INFO     | . payload setup = 3 s
[2025-06-04 12:56:19] 2025-06-04 10:55:59,865 | INFO     | . stage-in = 0 s
[2025-06-04 12:56:19] 2025-06-04 10:55:59,865 | INFO     | . payload execution = 4314 s
[2025-06-04 12:56:19] 2025-06-04 10:55:59,865 | INFO     | . stage-out = 0 s
[2025-06-04 12:56:19] 2025-06-04 10:55:59,865 | INFO     | . log creation = 0 s
[2025-06-04 12:56:19] 2025-06-04 10:55:59,865 | INFO     | ..............................
[2025-06-04 12:56:19] 2025-06-04 10:55:59,885 | INFO     | sufficient remaining disk space (368945659904 B)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,891 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | 
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | job summary report
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | --------------------------------------------------
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | PanDA job id: 6678070857
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | task id: 45006595
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | errors: (none)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | pilot state: finished 
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | transexitcode: 0
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | exeerrorcode: 0
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | exeerrordiag: 
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | exitcode: 0
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | exitmsg: OK
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | cpuconsumptiontime: 12308 s
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | nevents: 400
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | neventsw: 0
[2025-06-04 12:56:19] 2025-06-04 10:55:59,897 | INFO     | pid: 807867
[2025-06-04 12:56:19] 2025-06-04 10:55:59,898 | INFO     | pgrp: 807867
[2025-06-04 12:56:19] 2025-06-04 10:55:59,898 | INFO     | corecount: 3
[2025-06-04 12:56:19] 2025-06-04 10:55:59,898 | INFO     | event service: False
[2025-06-04 12:56:19] 2025-06-04 10:55:59,898 | INFO     | sizes: {0: 2405187, 3: 2405393, 11: 2405421, 4321: 2440446, 4327: 2440560}
[2025-06-04 12:56:19] 2025-06-04 10:55:59,898 | INFO     | --------------------------------------------------
[2025-06-04 12:56:19] 2025-06-04 10:55:59,898 | INFO     | 
[2025-06-04 12:56:19] 2025-06-04 10:55:59,898 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 12:56:19] 2025-06-04 10:55:59,900 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6678070857: 2886856 B (within 2537553920 B limit)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,901 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6678070857/HITS.45006595._044732.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,901 | INFO     | total size of present files: 0 B (workdir size: 2886856 B)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,901 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6678070857/HITS.45006595._044732.pool.root.1 since it does not exist
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:56:19] 2025-06-04 10:55:59,913 | INFO     | job 6678070857 has completed (purged errors)
[2025-06-04 12:56:19] 2025-06-04 10:55:59,913 | INFO     | overall cleanup function is called
[2025-06-04 12:56:19] 2025-06-04 10:55:59,944 | INFO     | number of running child processes to parent process 807867: 1
[2025-06-04 12:56:19] 2025-06-04 10:55:59,944 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:56:19] 2025-06-04 10:55:59,944 | INFO     | aborting job monitoring since job object (job id=6678070857) has expired
[2025-06-04 12:56:19] 2025-06-04 10:56:00,920 | INFO     | --- collectZombieJob: --- 10, [807867]
[2025-06-04 12:56:19] 2025-06-04 10:56:00,920 | INFO     | zombie collector waiting for pid 807867
[2025-06-04 12:56:19] 2025-06-04 10:56:00,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:56:19] 2025-06-04 10:56:00,920 | INFO     | collected zombie processes
[2025-06-04 12:56:19] 2025-06-04 10:56:00,920 | INFO     | will attempt to kill all subprocesses of pid=807867
[2025-06-04 12:56:19] 2025-06-04 10:56:00,960 | INFO     | process IDs to be killed: [807867] (in reverse order)
[2025-06-04 12:56:19] 2025-06-04 10:56:00,985 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:56:19] 2025-06-04 10:56:00,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:56:19] 2025-06-04 10:56:00,987 | INFO     | did not find any defunct processes belonging to 807867
[2025-06-04 12:56:19] 2025-06-04 10:56:00,988 | INFO     | did not find any defunct processes belonging to 807867
[2025-06-04 12:56:19] 2025-06-04 10:56:00,988 | INFO     | ready for new job
[2025-06-04 12:56:19] 2025-06-04 10:56:00,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:56:19] 2025-06-04 10:56:00,989 | INFO     | **************************************
[2025-06-04 12:56:19] 2025-06-04 10:56:00,989 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:56:19] 2025-06-04 10:56:00,989 | INFO     | **************************************
[2025-06-04 12:56:19] 2025-06-04 10:56:00,989 | INFO     | 
[2025-06-04 12:56:19] 2025-06-04 10:56:00,989 | INFO     | architecture information:
[2025-06-04 12:56:19] 2025-06-04 10:56:00,989 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:56:19] 2025-06-04 10:56:00,999 | INFO     | cat /etc/os-release:
[2025-06-04 12:56:19] NAME="CentOS Linux"
[2025-06-04 12:56:19] VERSION="7 (Core)"
[2025-06-04 12:56:19] ID="centos"
[2025-06-04 12:56:19] ID_LIKE="rhel fedora"
[2025-06-04 12:56:19] VERSION_ID="7"
[2025-06-04 12:56:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:56:19] ANSI_COLOR="0;31"
[2025-06-04 12:56:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:56:19] HOME_URL="https://www.centos.org/"
[2025-06-04 12:56:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:56:19] 
[2025-06-04 12:56:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:56:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:56:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:56:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:56:19] 
[2025-06-04 12:56:19] 2025-06-04 10:56:00,999 | INFO     | **************************************
[2025-06-04 12:56:19] 2025-06-04 10:56:01,502 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 12:56:19] 2025-06-04 10:56:01,516 | INFO     | sufficient remaining disk space (368948805632 B)
[2025-06-04 12:56:19] 2025-06-04 10:56:01,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:56:19] 2025-06-04 10:56:01,516 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:56:19] 2025-06-04 10:56:01,516 | INFO     | update_server=False
[2025-06-04 12:56:19] 2025-06-04 10:56:01,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:56:19] 2025-06-04 10:56:01,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:56:19] 2025-06-04 10:56:01,516 | INFO     | aborting loop
[2025-06-04 12:56:19] 2025-06-04 10:56:01,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:56:19] 2025-06-04 10:56:01,517 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:56:19] 2025-06-04 10:56:01,517 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:56:19] 2025-06-04 10:56:01,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:56:19] 2025-06-04 10:56:01,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:56:19] 2025-06-04 10:56:01,627 | INFO     | all job control threads have been joined
[2025-06-04 12:56:19] 2025-06-04 10:56:02,017 | INFO     | all data control threads have been joined
[2025-06-04 12:56:19] 2025-06-04 10:56:02,051 | INFO     | all payload control threads have been joined
[2025-06-04 12:56:19] 2025-06-04 10:56:02,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:56:19] 2025-06-04 10:56:02,521 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:02,521 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:02,522 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:02,632 | INFO     | [job] control thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:02,896 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:03,023 | INFO     | [data] control thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:03,056 | INFO     | [payload] control thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:03,138 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:03,272 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:03,540 | INFO     | [job] validate thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:03,615 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:03,665 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:03,868 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:04,207 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:04,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:56:19] 2025-06-04 10:56:08,735 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:12,502 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:56:19] 2025-06-04 10:56:13,507 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:56:19] 2025-06-04 10:56:14,613 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139854108522304)>', '<ExcThread(monitor, started 139852725090048)>']
[2025-06-04 12:56:19] 2025-06-04 10:56:15,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:56:19] 2025-06-04 10:56:15,590 | INFO     | [monitor] control thread has ended
[2025-06-04 12:56:19] 2025-06-04 10:56:19,639 | INFO     | all workflow threads have been joined
[2025-06-04 12:56:19] 2025-06-04 10:56:19,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:56:19] 2025-06-04 10:56:19,639 | INFO     | traces error code: 0
[2025-06-04 12:56:19] 2025-06-04 10:56:19,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:56:19] 2025-06-04 10:56:19,690 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:56:19] 2025-06-04 10:56:19,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:56:19] 2025-06-04 10:56:19,696 [wrapper] pilotpid: 801367
[2025-06-04 12:56:19] 2025-06-04 10:56:19,698 [wrapper] Pilot exit status: 0
[2025-06-04 12:56:19] 2025-06-04 10:56:19,706 [wrapper] pandaids: 6678070857
[2025-06-04 12:56:19] 2025-06-04 10:56:19,723 [wrapper] cleanup supervisor_pilot  817335 801368
[2025-06-04 12:56:19] 2025-06-04 10:56:19,725 [wrapper] Test setup, not cleaning
[2025-06-04 12:56:19] 2025-06-04 10:56:19,728 [wrapper] apfmon messages muted
[2025-06-04 12:56:19] 2025-06-04 10:56:19,730 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:56:19] 2025-06-04 10:56:19,733 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:56:19]  *** Error codes and diagnostics ***
[2025-06-04 12:56:19]     "exeErrorCode": 0,
[2025-06-04 12:56:19]     "exeErrorDiag": "",
[2025-06-04 12:56:19]     "pilotErrorCode": 0,
[2025-06-04 12:56:19]     "pilotErrorDiag": "",
[2025-06-04 12:56:19]  *** Listing of results directory ***
[2025-06-04 12:56:19] total 391608
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:09 pilot3.tar.gz
[2025-06-04 12:56:19] -rwx------ 1 boinc boinc     37140 Jun  3 22:13 runpilot2-wrapper.sh
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:13 queuedata.json
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:56:19] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:43 run_atlas
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:43 job.xml
[2025-06-04 12:56:19] -rw-r--r-- 2 boinc boinc 213850544 Jun  4 11:43 EVNT.45006593._001793.pool.root.1
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc      6933 Jun  4 11:43 init_data.xml
[2025-06-04 12:56:19] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:43 shared
[2025-06-04 12:56:19] -rw-r--r-- 2 boinc boinc    508875 Jun  4 11:43 input.tar.gz
[2025-06-04 12:56:19] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:43 boinc_lockfile
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc      2525 Jun  4 11:43 pandaJob.out
[2025-06-04 12:56:19] -rw------- 1 boinc boinc    986766 Jun  4 11:43 agis_schedconf.cvmfs.json
[2025-06-04 12:56:19] -rw------- 1 boinc boinc   1603667 Jun  4 11:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:56:19] drwx------ 4 boinc boinc      4096 Jun  4 11:43 pilot3
[2025-06-04 12:56:19] -rw------- 1 boinc boinc 181988167 Jun  4 12:55 HITS.45006595._044732.pool.root.1
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:55 boinc_task_state.xml
[2025-06-04 12:56:19] -rw------- 1 boinc boinc      1018 Jun  4 12:55 memory_monitor_summary.json
[2025-06-04 12:56:19] -rw------- 1 boinc boinc    236612 Jun  4 12:55 log.45006595._044732.job.log.tgz.1
[2025-06-04 12:56:19] -rw------- 1 boinc boinc      7660 Jun  4 12:55 heartbeat.json
[2025-06-04 12:56:19] -rw------- 1 boinc boinc        95 Jun  4 12:56 pilot_heartbeat.json
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:56 wrapper_checkpoint.txt
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:56 boinc_mmap_file
[2025-06-04 12:56:19] -rw------- 1 boinc boinc      4552 Jun  4 12:56 pilotlog.txt
[2025-06-04 12:56:19] -rw------- 1 boinc boinc    428269 Jun  4 12:56 log.45006595._044732.job.log.1
[2025-06-04 12:56:19] -rw------- 1 boinc boinc       357 Jun  4 12:56 output.list
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:56 runtime_log
[2025-06-04 12:56:19] -rw------- 1 boinc boinc    686080 Jun  4 12:56 result.tar.gz
[2025-06-04 12:56:19] -rw------- 1 boinc boinc       662 Jun  4 12:56 usQNDmwBng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlrZKDm2emfvn.diag
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc      8753 Jun  4 12:56 runtime_log.err
[2025-06-04 12:56:19] -rw-r--r-- 1 boinc boinc     22260 Jun  4 12:56 stderr.txt
[2025-06-04 12:56:19] HITS file was successfully produced:
[2025-06-04 12:56:19] -rw------- 1 boinc boinc 181988167 Jun  4 12:55 shared/HITS.pool.root.1
[2025-06-04 12:56:19]  *** Contents of shared directory: ***
[2025-06-04 12:56:19] total 387760
[2025-06-04 12:56:19] -rw-r--r-- 2 boinc boinc 213850544 Jun  4 11:43 ATLAS.root_0
[2025-06-04 12:56:19] -rw-r--r-- 2 boinc boinc    508875 Jun  4 11:43 input.tar.gz
[2025-06-04 12:56:19] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 12:56:19] -rw------- 1 boinc boinc 181988167 Jun  4 12:55 HITS.pool.root.1
[2025-06-04 12:56:19] -rw------- 1 boinc boinc    686080 Jun  4 12:56 result.tar.gz
12:56:21 (797724): run_atlas exited; CPU time 12319.145772
12:56:21 (797724): called boinc_finish(0)

</stderr_txt>
]]>

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