Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:34:44 (102305): wrapper (7.7.26015): starting
12:34:44 (102305): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 12:34:44] Arguments: --nthreads 3
[2025-06-04 12:34:44] Threads: 3
[2025-06-04 12:34:44] Checking for CVMFS
[2025-06-04 12:34:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:34:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:34:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:34:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:34:44] 2.9.2.0 2899 287 60712 146777 1 55 32066523 36864000 0 130560 0 266666 99.992 76722 52298 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 12:34:44] CVMFS is ok
[2025-06-04 12:34:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:34:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:34:44] Further information can be found at the LHC@home message board.
[2025-06-04 12:34:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:34:44] Checking for apptainer binary...
[2025-06-04 12:34:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:34:44] Running /usr/bin/apptainer --version
[2025-06-04 12:34:44] apptainer version 1.3.6-6.1
[2025-06-04 12:34:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:34:44] magicA246
[2025-06-04 12:34:44] apptainer works
[2025-06-04 12:34:44] Set ATHENA_PROC_NUMBER=3
[2025-06-04 12:34:44] Set ATHENA_CORE_NUMBER=3
[2025-06-04 12:34:44] Starting ATLAS job with PandaID=6678014447
[2025-06-04 12:34:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:49:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:49:15]  lfn=log.45006595._044072.job.log.tgz.1
[2025-06-04 13:49:15]  mtime=0
[2025-06-04 13:49:15]  protocol_id=None
[2025-06-04 13:49:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:49:15]  replicas=None
[2025-06-04 13:49:15]  scope=mc23_13p6TeV
[2025-06-04 13:49:15]  status=None
[2025-06-04 13:49:15]  status_code=0
[2025-06-04 13:49:15]  storage_token=
[2025-06-04 13:49:15]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678014447/log.45006595._044072.job.log.tgz.1
[2025-06-04 13:49:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/b8/log.45006595._044072.job.log.tgz.1
[2025-06-04 13:49:15]  workdir=None
[2025-06-04 13:49:15] ]
[2025-06-04 13:49:15] 2025-06-04 11:48:56,625 | INFO     | transferring file log.45006595._044072.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678014447/log.45006595._044072.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 13:49:15] 2025-06-04 11:48:56,626 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678014447/log.45006595._044072.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0440
[2025-06-04 13:49:15] 2025-06-04 11:48:56,640 | INFO     | adding to output.list: log.45006595._044072.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/b8/log.45006595._044072.job.log.tg
[2025-06-04 13:49:15] 2025-06-04 11:48:56,641 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:49:15] 2025-06-04 11:48:56,641 | INFO     | summary of transferred files:
[2025-06-04 13:49:15] 2025-06-04 11:48:56,641 | INFO     |  -- lfn=log.45006595._044072.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:49:15] 2025-06-04 11:48:56,641 | INFO     | stage-out finished correctly
[2025-06-04 13:49:15] 2025-06-04 11:48:56,707 | WARNING  | process 112439 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:49:15] 2025-06-04 11:48:56,707 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678014447/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:49:15] 2025-06-04 11:48:56,746 | INFO     | number of running child processes to parent process 112439: 1
[2025-06-04 13:49:15] 2025-06-04 11:48:56,747 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:49:15] 2025-06-04 11:48:56,913 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:49:15] 2025-06-04 11:48:58,507 | INFO     | job 6678014447 has state=finished
[2025-06-04 13:49:15] 2025-06-04 11:48:58,507 | INFO     | preparing for final server update for job 6678014447 in state='finished'
[2025-06-04 13:49:15] 2025-06-04 11:48:58,507 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:49:15] 2025-06-04 11:48:58,507 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:49:15] 2025-06-04 11:48:58,507 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:49:15] 2025-06-04 11:48:58,508 | INFO     | job 6678014447 has finished - writing final server update
[2025-06-04 13:49:15] 2025-06-04 11:48:58,508 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:49:15] 2025-06-04 11:48:58,509 | INFO     | executing command: lscpu
[2025-06-04 13:49:15] 2025-06-04 11:48:58,527 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:49:15] 2025-06-04 11:48:59,250 | INFO     | monitor loop #343: job 0:6678014447 is in state 'finished'
[2025-06-04 13:49:15] 2025-06-04 11:48:59,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:49:15] 2025-06-04 11:49:01,754 | INFO     | monitor loop #344: job 0:6678014447 is in state 'finished'
[2025-06-04 13:49:15] 2025-06-04 11:49:01,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:49:15] 2025-06-04 11:49:02,164 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:49:15] 2025-06-04 11:49:02,164 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678014447/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:49:15] 2025-06-04 11:49:02,164 | INFO     | extracted standard info from prmon json
[2025-06-04 13:49:15] 2025-06-04 11:49:02,164 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:49:15] 2025-06-04 11:49:02,164 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:49:15] 2025-06-04 11:49:02,165 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:49:15] 2025-06-04 11:49:02,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:49:15] 2025-06-04 11:49:02,165 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:49:15] 2025-06-04 11:49:02,165 | INFO     | sum of square deviations: 89127252.5
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | sum of deviations: -8951022727.5
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | mean x: 1749035598.5
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | mean y: 2477297.9545454546
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | -- intersect: 175657587875.72162
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | intersect: 175657587875.72162
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | chi2: 0.05829531659592242
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | -- intersect: 175657587875.72162
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | current memory leak: -100.43 B/s (using 66 data points, chi2=0.06)
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | ..............................
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | . Timing measurements:
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | . get job = 0 s
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | . initial setup = 1 s
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | . payload setup = 3 s
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | . stage-in = 0 s
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | . payload execution = 4424 s
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | . stage-out = 0 s
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | . log creation = 0 s
[2025-06-04 13:49:15] 2025-06-04 11:49:02,166 | INFO     | ..............................
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | 
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | job summary report
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | --------------------------------------------------
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | PanDA job id: 6678014447
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | task id: 45006595
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | errors: (none)
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | pilot state: finished 
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | transexitcode: 0
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | exeerrorcode: 0
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | exeerrordiag: 
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | exitcode: 0
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | exitmsg: OK
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | cpuconsumptiontime: 12681 s
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | nevents: 400
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | neventsw: 0
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | pid: 112439
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | pgrp: 112439
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | corecount: 3
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | event service: False
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | sizes: {0: 2405187, 3: 2405393, 11: 2405421, 4432: 2431555, 4433: 2440557, 4434: 2440557, 4439: 2440855}
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | --------------------------------------------------
[2025-06-04 13:49:15] 2025-06-04 11:49:02,198 | INFO     | 
[2025-06-04 13:49:15] 2025-06-04 11:49:02,199 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 13:49:15] 2025-06-04 11:49:02,212 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | job 6678014447 has completed (purged errors)
[2025-06-04 13:49:15] 2025-06-04 11:49:02,213 | INFO     | overall cleanup function is called
[2025-06-04 13:49:15] 2025-06-04 11:49:03,219 | INFO     | --- collectZombieJob: --- 10, [112439]
[2025-06-04 13:49:15] 2025-06-04 11:49:03,220 | INFO     | zombie collector waiting for pid 112439
[2025-06-04 13:49:15] 2025-06-04 11:49:03,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:49:15] 2025-06-04 11:49:03,220 | INFO     | collected zombie processes
[2025-06-04 13:49:15] 2025-06-04 11:49:03,220 | INFO     | will attempt to kill all subprocesses of pid=112439
[2025-06-04 13:49:15] 2025-06-04 11:49:03,266 | INFO     | process IDs to be killed: [112439] (in reverse order)
[2025-06-04 13:49:15] 2025-06-04 11:49:03,293 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:49:15] 2025-06-04 11:49:03,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:49:15] 2025-06-04 11:49:03,294 | INFO     | did not find any defunct processes belonging to 112439
[2025-06-04 13:49:15] 2025-06-04 11:49:03,295 | INFO     | did not find any defunct processes belonging to 112439
[2025-06-04 13:49:15] 2025-06-04 11:49:03,296 | INFO     | ready for new job
[2025-06-04 13:49:15] 2025-06-04 11:49:03,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:49:15] 2025-06-04 11:49:03,296 | INFO     | **************************************
[2025-06-04 13:49:15] 2025-06-04 11:49:03,296 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:49:15] 2025-06-04 11:49:03,296 | INFO     | **************************************
[2025-06-04 13:49:15] 2025-06-04 11:49:03,296 | INFO     | 
[2025-06-04 13:49:15] 2025-06-04 11:49:03,297 | INFO     | architecture information:
[2025-06-04 13:49:15] 2025-06-04 11:49:03,297 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:49:15] 2025-06-04 11:49:03,306 | INFO     | cat /etc/os-release:
[2025-06-04 13:49:15] NAME="CentOS Linux"
[2025-06-04 13:49:15] VERSION="7 (Core)"
[2025-06-04 13:49:15] ID="centos"
[2025-06-04 13:49:15] ID_LIKE="rhel fedora"
[2025-06-04 13:49:15] VERSION_ID="7"
[2025-06-04 13:49:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:49:15] ANSI_COLOR="0;31"
[2025-06-04 13:49:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:49:15] HOME_URL="https://www.centos.org/"
[2025-06-04 13:49:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:49:15] 
[2025-06-04 13:49:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:49:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:49:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:49:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:49:15] 
[2025-06-04 13:49:15] 2025-06-04 11:49:03,306 | INFO     | **************************************
[2025-06-04 13:49:15] 2025-06-04 11:49:03,810 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 13:49:15] 2025-06-04 11:49:03,823 | INFO     | sufficient remaining disk space (367993552896 B)
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | INFO     | update_server=False
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:49:15] 2025-06-04 11:49:03,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:49:15] 2025-06-04 11:49:04,258 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 13:49:15] 2025-06-04 11:49:04,259 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 13:49:15] 2025-06-04 11:49:04,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:49:15] 2025-06-04 11:49:04,259 | INFO     | will abort loop
[2025-06-04 13:49:15] 2025-06-04 11:49:04,263 | INFO     | all payload control threads have been joined
[2025-06-04 13:49:15] 2025-06-04 11:49:04,327 | INFO     | all data control threads have been joined
[2025-06-04 13:49:15] 2025-06-04 11:49:04,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:49:15] 2025-06-04 11:49:04,827 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:04,829 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:05,016 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:05,040 | INFO     | all job control threads have been joined
[2025-06-04 13:49:15] 2025-06-04 11:49:05,050 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:05,264 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:05,268 | INFO     | [payload] control thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:05,333 | INFO     | [data] control thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:05,338 | INFO     | [job] validate thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:05,416 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:05,417 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:05,533 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:06,046 | INFO     | [job] control thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:06,071 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:06,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:06,691 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:07,831 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:49:15] 2025-06-04 11:49:09,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444728297280)>', '<ExcThread(monitor, started 140444373587712)>']
[2025-06-04 13:49:15] 2025-06-04 11:49:10,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:49:15] 2025-06-04 11:49:10,862 | INFO     | [monitor] control thread has ended
[2025-06-04 13:49:15] 2025-06-04 11:49:14,908 | INFO     | all workflow threads have been joined
[2025-06-04 13:49:15] 2025-06-04 11:49:14,908 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:49:15] 2025-06-04 11:49:14,908 | INFO     | traces error code: 0
[2025-06-04 13:49:15] 2025-06-04 11:49:14,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:49:15] 2025-06-04 11:49:14,962 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:49:15] 2025-06-04 11:49:14,965 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:49:15] 2025-06-04 11:49:14,968 [wrapper] pilotpid: 105939
[2025-06-04 13:49:15] 2025-06-04 11:49:14,970 [wrapper] Pilot exit status: 0
[2025-06-04 13:49:15] 2025-06-04 11:49:14,978 [wrapper] pandaids: 6678014447
[2025-06-04 13:49:15] 2025-06-04 11:49:14,996 [wrapper] cleanup supervisor_pilot  122203 105940
[2025-06-04 13:49:15] 2025-06-04 11:49:14,999 [wrapper] Test setup, not cleaning
[2025-06-04 13:49:15] 2025-06-04 11:49:15,001 [wrapper] apfmon messages muted
[2025-06-04 13:49:15] 2025-06-04 11:49:15,004 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:49:15] 2025-06-04 11:49:15,006 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:49:15]  *** Error codes and diagnostics ***
[2025-06-04 13:49:15]     "exeErrorCode": 0,
[2025-06-04 13:49:15]     "exeErrorDiag": "",
[2025-06-04 13:49:15]     "pilotErrorCode": 0,
[2025-06-04 13:49:15]     "pilotErrorDiag": "",
[2025-06-04 13:49:15]  *** Listing of results directory ***
[2025-06-04 13:49:15] total 392032
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:51 queuedata.json
[2025-06-04 13:49:15] -rwx------ 1 boinc boinc     37140 Jun  3 21:52 runpilot2-wrapper.sh
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:49:15] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:34 run_atlas
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:34 job.xml
[2025-06-04 13:49:15] -rw-r--r-- 2 boinc boinc 214709321 Jun  4 12:34 EVNT.45006593._001766.pool.root.1
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc      6931 Jun  4 12:34 init_data.xml
[2025-06-04 13:49:15] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:34 shared
[2025-06-04 13:49:15] -rw-r--r-- 2 boinc boinc    508882 Jun  4 12:34 input.tar.gz
[2025-06-04 13:49:15] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:34 start_atlas.sh
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:34 boinc_lockfile
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc      2525 Jun  4 12:34 pandaJob.out
[2025-06-04 13:49:15] -rw------- 1 boinc boinc    986812 Jun  4 12:34 agis_schedconf.cvmfs.json
[2025-06-04 13:49:15] -rw------- 1 boinc boinc   1603667 Jun  4 12:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:49:15] drwx------ 4 boinc boinc      4096 Jun  4 12:34 pilot3
[2025-06-04 13:49:15] -rw------- 1 boinc boinc        95 Jun  4 13:48 pilot_heartbeat.json
[2025-06-04 13:49:15] -rw------- 1 boinc boinc 181579424 Jun  4 13:48 HITS.45006595._044072.pool.root.1
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc       529 Jun  4 13:48 boinc_task_state.xml
[2025-06-04 13:49:15] -rw------- 1 boinc boinc      1019 Jun  4 13:48 memory_monitor_summary.json
[2025-06-04 13:49:15] -rw------- 1 boinc boinc    220922 Jun  4 13:48 log.45006595._044072.job.log.tgz.1
[2025-06-04 13:49:15] -rw------- 1 boinc boinc      7658 Jun  4 13:49 heartbeat.json
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:49 boinc_mmap_file
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc        27 Jun  4 13:49 wrapper_checkpoint.txt
[2025-06-04 13:49:15] -rw------- 1 boinc boinc      4666 Jun  4 13:49 pilotlog.txt
[2025-06-04 13:49:15] -rw------- 1 boinc boinc    438360 Jun  4 13:49 log.45006595._044072.job.log.1
[2025-06-04 13:49:15] -rw------- 1 boinc boinc       357 Jun  4 13:49 output.list
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc       620 Jun  4 13:49 runtime_log
[2025-06-04 13:49:15] -rw------- 1 boinc boinc    675840 Jun  4 13:49 result.tar.gz
[2025-06-04 13:49:15] -rw------- 1 boinc boinc       661 Jun  4 13:49 vn1LDm2rmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDnZKDmWWnyim.diag
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc      8748 Jun  4 13:49 runtime_log.err
[2025-06-04 13:49:15] -rw-r--r-- 1 boinc boinc     21577 Jun  4 13:49 stderr.txt
[2025-06-04 13:49:15] HITS file was successfully produced:
[2025-06-04 13:49:15] -rw------- 1 boinc boinc 181579424 Jun  4 13:48 shared/HITS.pool.root.1
[2025-06-04 13:49:15]  *** Contents of shared directory: ***
[2025-06-04 13:49:15] total 388188
[2025-06-04 13:49:15] -rw-r--r-- 2 boinc boinc 214709321 Jun  4 12:34 ATLAS.root_0
[2025-06-04 13:49:15] -rw-r--r-- 2 boinc boinc    508882 Jun  4 12:34 input.tar.gz
[2025-06-04 13:49:15] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:34 start_atlas.sh
[2025-06-04 13:49:15] -rw------- 1 boinc boinc 181579424 Jun  4 13:48 HITS.pool.root.1
[2025-06-04 13:49:15] -rw------- 1 boinc boinc    675840 Jun  4 13:49 result.tar.gz
13:49:16 (102305): run_atlas exited; CPU time 12695.182114
13:49:16 (102305): called boinc_finish(0)

</stderr_txt>
]]>

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