Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:17:40 (22610): wrapper (7.7.26015): starting
20:17:40 (22610): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 20:17:40] Arguments: --nthreads 12
[2025-06-03 20:17:40] Threads: 12
[2025-06-03 20:17:40] Checking for CVMFS
[2025-06-03 20:17:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:17:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:17:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:17:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:17:41] 2.11.2.0 2933 34951 86872 146761 0 187 17941937 20275200 1 130560 0 15122009 99.982 6064387 7459 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 20:17:41] CVMFS is ok
[2025-06-03 20:17:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:17:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:17:41] Further information can be found at the LHC@home message board.
[2025-06-03 20:17:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:17:41] Checking for apptainer binary...
[2025-06-03 20:17:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:17:41] Running /usr/bin/apptainer --version
[2025-06-03 20:17:41] apptainer version 1.3.2-1.el7
[2025-06-03 20:17:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:17:42] c-205-15.aglt2.org
[2025-06-03 20:17:42] apptainer works
[2025-06-03 20:17:42] Set ATHENA_PROC_NUMBER=12
[2025-06-03 20:17:42] Set ATHENA_CORE_NUMBER=12
[2025-06-03 20:17:42] Starting ATLAS job with PandaID=6677920660
[2025-06-03 20:17:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:21:04]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:21:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 21:21:04]  is_altstaged=None
[2025-06-03 21:21:04]  is_tar=False
[2025-06-03 21:21:04]  lfn=log.45006595._042212.job.log.tgz.1
[2025-06-03 21:21:04]  mtime=0
[2025-06-03 21:21:04]  protocol_id=None
[2025-06-03 21:21:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 21:21:04]  replicas=None
[2025-06-03 21:21:04]  scope=mc23_13p6TeV
[2025-06-03 21:21:04]  status=None
[2025-06-03 21:21:04]  status_code=0
[2025-06-03 21:21:04]  storage_token=
[2025-06-03 21:21:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677920660/log.45006595._042212.job.log.tgz.1
[2025-06-03 21:21:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/17/log.45006595._042212.job.log.tgz.1
[2025-06-03 21:21:04]  workdir=None
[2025-06-03 21:21:04] ]
[2025-06-03 21:21:04] 2025-06-04 01:20:43,587 | INFO     | transferring file log.45006595._042212.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677920660/log.45006595._042212.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:21:04] 2025-06-04 01:20:43,588 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677920660/log.45006595._042212.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._042212.job
[2025-06-03 21:21:04] 2025-06-04 01:20:43,610 | INFO     | adding to output.list: log.45006595._042212.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/17/log.45006595._042212.job.log.tg
[2025-06-03 21:21:04] 2025-06-04 01:20:43,611 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:21:04] 2025-06-04 01:20:43,611 | INFO     | summary of transferred files:
[2025-06-03 21:21:04] 2025-06-04 01:20:43,611 | INFO     |  -- lfn=log.45006595._042212.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:21:04] 2025-06-04 01:20:43,612 | INFO     | stage-out finished correctly
[2025-06-03 21:21:04] 2025-06-04 01:20:43,914 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:21:04] 2025-06-04 01:20:44,565 | INFO     | job 6677920660 has state=finished
[2025-06-03 21:21:04] 2025-06-04 01:20:44,565 | INFO     | preparing for final server update for job 6677920660 in state='finished'
[2025-06-03 21:21:04] 2025-06-04 01:20:44,566 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:21:04] 2025-06-04 01:20:44,566 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:21:04] 2025-06-04 01:20:44,566 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:21:04] 2025-06-04 01:20:44,566 | INFO     | job 6677920660 has finished - writing final server update
[2025-06-03 21:21:04] 2025-06-04 01:20:44,566 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:21:04] 2025-06-04 01:20:44,568 | INFO     | executing command: lscpu
[2025-06-03 21:21:04] 2025-06-04 01:20:44,597 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:21:04] 2025-06-04 01:20:45,248 | WARNING  | process 32729 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 21:21:04] 2025-06-04 01:20:45,249 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677920660/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:21:04] 2025-06-04 01:20:45,347 | INFO     | number of running child processes to parent process 32729: 1
[2025-06-03 21:21:04] 2025-06-04 01:20:45,347 | INFO     | maximum number of monitored processes: 6
[2025-06-03 21:21:04] 2025-06-04 01:20:47,706 | INFO     | 3774s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 21:21:04] 2025-06-04 01:20:47,850 | INFO     | monitor loop #284: job 0:6677920660 is in state 'finished'
[2025-06-03 21:21:04] 2025-06-04 01:20:47,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:21:04] 2025-06-04 01:20:49,261 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 21:21:04] 2025-06-04 01:20:49,262 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677920660/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:21:04] 2025-06-04 01:20:49,263 | INFO     | extracted standard info from prmon json
[2025-06-03 21:21:04] 2025-06-04 01:20:49,263 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:21:04] 2025-06-04 01:20:49,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:21:04] 2025-06-04 01:20:49,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:21:04] 2025-06-04 01:20:49,264 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:21:04] 2025-06-04 01:20:49,265 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:21:04] 2025-06-04 01:20:49,266 | INFO     | sum of square deviations: 51573060.0
[2025-06-03 21:21:04] 2025-06-04 01:20:49,266 | INFO     | sum of deviations: -935267006.0
[2025-06-03 21:21:04] 2025-06-04 01:20:49,266 | INFO     | mean x: 1748998259.0
[2025-06-03 21:21:04] 2025-06-04 01:20:49,266 | INFO     | mean y: 2921235.290909091
[2025-06-03 21:21:04] 2025-06-04 01:20:49,267 | INFO     | -- intersect: 31720650708.66601
[2025-06-03 21:21:04] 2025-06-04 01:20:49,267 | INFO     | intersect: 31720650708.66601
[2025-06-03 21:21:04] 2025-06-04 01:20:49,267 | INFO     | chi2: 0.03438084088354642
[2025-06-03 21:21:04] 2025-06-04 01:20:49,267 | INFO     | -- intersect: 31720650708.66601
[2025-06-03 21:21:04] 2025-06-04 01:20:49,267 | INFO     | current memory leak: -18.13 B/s (using 55 data points, chi2=0.03)
[2025-06-03 21:21:04] 2025-06-04 01:20:49,268 | INFO     | ..............................
[2025-06-03 21:21:04] 2025-06-04 01:20:49,268 | INFO     | . Timing measurements:
[2025-06-03 21:21:04] 2025-06-04 01:20:49,268 | INFO     | . get job = 0 s
[2025-06-03 21:21:04] 2025-06-04 01:20:49,268 | INFO     | . initial setup = 3 s
[2025-06-03 21:21:04] 2025-06-04 01:20:49,268 | INFO     | . payload setup = 9 s
[2025-06-03 21:21:04] 2025-06-04 01:20:49,268 | INFO     | . stage-in = 0 s
[2025-06-03 21:21:04] 2025-06-04 01:20:49,268 | INFO     | . payload execution = 3737 s
[2025-06-03 21:21:04] 2025-06-04 01:20:49,269 | INFO     | . stage-out = 0 s
[2025-06-03 21:21:04] 2025-06-04 01:20:49,269 | INFO     | . log creation = 0 s
[2025-06-03 21:21:04] 2025-06-04 01:20:49,269 | INFO     | ..............................
[2025-06-03 21:21:04] 2025-06-04 01:20:49,527 | INFO     | 
[2025-06-03 21:21:04] 2025-06-04 01:20:49,528 | INFO     | job summary report
[2025-06-03 21:21:04] 2025-06-04 01:20:49,528 | INFO     | --------------------------------------------------
[2025-06-03 21:21:04] 2025-06-04 01:20:49,528 | INFO     | PanDA job id: 6677920660
[2025-06-03 21:21:04] 2025-06-04 01:20:49,528 | INFO     | task id: 45006595
[2025-06-03 21:21:04] 2025-06-04 01:20:49,528 | INFO     | errors: (none)
[2025-06-03 21:21:04] 2025-06-04 01:20:49,528 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:21:04] 2025-06-04 01:20:49,529 | INFO     | pilot state: finished 
[2025-06-03 21:21:04] 2025-06-04 01:20:49,529 | INFO     | transexitcode: 0
[2025-06-03 21:21:04] 2025-06-04 01:20:49,529 | INFO     | exeerrorcode: 0
[2025-06-03 21:21:04] 2025-06-04 01:20:49,529 | INFO     | exeerrordiag: 
[2025-06-03 21:21:04] 2025-06-04 01:20:49,529 | INFO     | exitcode: 0
[2025-06-03 21:21:04] 2025-06-04 01:20:49,529 | INFO     | exitmsg: OK
[2025-06-03 21:21:04] 2025-06-04 01:20:49,529 | INFO     | cpuconsumptiontime: 40439 s
[2025-06-03 21:21:04] 2025-06-04 01:20:49,530 | INFO     | nevents: 400
[2025-06-03 21:21:04] 2025-06-04 01:20:49,530 | INFO     | neventsw: 0
[2025-06-03 21:21:04] 2025-06-04 01:20:49,530 | INFO     | pid: 32729
[2025-06-03 21:21:04] 2025-06-04 01:20:49,530 | INFO     | pgrp: 32729
[2025-06-03 21:21:04] 2025-06-04 01:20:49,530 | INFO     | corecount: 12
[2025-06-03 21:21:04] 2025-06-04 01:20:49,530 | INFO     | event service: False
[2025-06-03 21:21:04] 2025-06-04 01:20:49,531 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 12: 2405446, 3751: 2431042, 3752: 2440167, 3757: 2440281}
[2025-06-03 21:21:04] 2025-06-04 01:20:49,531 | INFO     | --------------------------------------------------
[2025-06-03 21:21:04] 2025-06-04 01:20:49,531 | INFO     | 
[2025-06-03 21:21:04] 2025-06-04 01:20:49,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 21:21:04] 2025-06-04 01:20:49,555 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,555 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:21:04] 2025-06-04 01:20:49,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:21:04] 2025-06-04 01:20:49,559 | INFO     | job 6677920660 has completed (purged errors)
[2025-06-03 21:21:04] 2025-06-04 01:20:49,559 | INFO     | overall cleanup function is called
[2025-06-03 21:21:04] 2025-06-04 01:20:50,567 | INFO     | --- collectZombieJob: --- 10, [32729]
[2025-06-03 21:21:04] 2025-06-04 01:20:50,567 | INFO     | zombie collector waiting for pid 32729
[2025-06-03 21:21:04] 2025-06-04 01:20:50,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:21:04] 2025-06-04 01:20:50,568 | INFO     | collected zombie processes
[2025-06-03 21:21:04] 2025-06-04 01:20:50,568 | INFO     | will attempt to kill all subprocesses of pid=32729
[2025-06-03 21:21:04] 2025-06-04 01:20:50,661 | INFO     | process IDs to be killed: [32729] (in reverse order)
[2025-06-03 21:21:04] 2025-06-04 01:20:50,715 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:21:04] 2025-06-04 01:20:50,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:21:04] 2025-06-04 01:20:50,720 | INFO     | did not find any defunct processes belonging to 32729
[2025-06-03 21:21:04] 2025-06-04 01:20:50,723 | INFO     | did not find any defunct processes belonging to 32729
[2025-06-03 21:21:04] 2025-06-04 01:20:50,724 | INFO     | ready for new job
[2025-06-03 21:21:04] 2025-06-04 01:20:50,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:21:04] 2025-06-04 01:20:50,725 | INFO     | **************************************
[2025-06-03 21:21:04] 2025-06-04 01:20:50,725 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:21:04] 2025-06-04 01:20:50,725 | INFO     | **************************************
[2025-06-03 21:21:04] 2025-06-04 01:20:50,726 | INFO     | 
[2025-06-03 21:21:04] 2025-06-04 01:20:50,726 | INFO     | architecture information:
[2025-06-03 21:21:04] 2025-06-04 01:20:50,727 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:21:04] 2025-06-04 01:20:50,743 | INFO     | cat /etc/os-release:
[2025-06-03 21:21:04] NAME="CentOS Linux"
[2025-06-03 21:21:04] VERSION="7 (Core)"
[2025-06-03 21:21:04] ID="centos"
[2025-06-03 21:21:04] ID_LIKE="rhel fedora"
[2025-06-03 21:21:04] VERSION_ID="7"
[2025-06-03 21:21:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:21:04] ANSI_COLOR="0;31"
[2025-06-03 21:21:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:21:04] HOME_URL="https://www.centos.org/"
[2025-06-03 21:21:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:21:04] 
[2025-06-03 21:21:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:21:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:21:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:21:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:21:04] 
[2025-06-03 21:21:04] 2025-06-04 01:20:50,743 | INFO     | **************************************
[2025-06-03 21:21:04] 2025-06-04 01:20:51,246 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 21:21:04] 2025-06-04 01:20:51,262 | INFO     | sufficient remaining disk space (29426188288 B)
[2025-06-03 21:21:04] 2025-06-04 01:20:51,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:21:04] 2025-06-04 01:20:51,262 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:21:04] 2025-06-04 01:20:51,263 | INFO     | update_server=False
[2025-06-03 21:21:04] 2025-06-04 01:20:51,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:21:04] 2025-06-04 01:20:51,263 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:21:04] 2025-06-04 01:20:51,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:21:04] 2025-06-04 01:20:51,264 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:21:04] 2025-06-04 01:20:51,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:21:04] 2025-06-04 01:20:51,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:21:04] 2025-06-04 01:20:51,267 | INFO     | all data control threads have been joined
[2025-06-03 21:21:04] 2025-06-04 01:20:51,327 | INFO     | all job control threads have been joined
[2025-06-03 21:21:04] 2025-06-04 01:20:51,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:21:04] 2025-06-04 01:20:51,358 | INFO     | aborting loop
[2025-06-03 21:21:04] 2025-06-04 01:20:51,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:21:04] 2025-06-04 01:20:51,777 | INFO     | all payload control threads have been joined
[2025-06-03 21:21:04] 2025-06-04 01:20:52,267 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,268 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,272 | INFO     | [data] control thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,328 | INFO     | [job] control thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,364 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,501 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,641 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,647 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,782 | INFO     | [payload] control thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,819 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:52,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:53,046 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:53,418 | INFO     | [job] validate thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:53,503 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:53,713 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:54,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:21:04] 2025-06-04 01:20:58,511 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:21:04] 2025-06-04 01:20:59,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910422587200)>', '<ExcThread(monitor, started 139909029426944)>']
[2025-06-03 21:21:04] 2025-06-04 01:21:00,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:21:04] 2025-06-04 01:21:00,310 | INFO     | [monitor] control thread has ended
[2025-06-03 21:21:04] 2025-06-04 01:21:04,521 | INFO     | all workflow threads have been joined
[2025-06-03 21:21:04] 2025-06-04 01:21:04,521 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:21:04] 2025-06-04 01:21:04,522 | INFO     | traces error code: 0
[2025-06-03 21:21:04] 2025-06-04 01:21:04,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:21:04] 2025-06-04 01:21:04,614 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:21:04] 2025-06-04 01:21:04,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:21:04] 2025-06-04 01:21:04,622 [wrapper] pilotpid: 26195
[2025-06-03 21:21:04] 2025-06-04 01:21:04,626 [wrapper] Pilot exit status: 0
[2025-06-03 21:21:04] 2025-06-04 01:21:04,641 [wrapper] pandaids: 6677920660
[2025-06-03 21:21:04] 2025-06-04 01:21:04,682 [wrapper] cleanup supervisor_pilot  7835 26196
[2025-06-03 21:21:04] 2025-06-04 01:21:04,686 [wrapper] Test setup, not cleaning
[2025-06-03 21:21:04] 2025-06-04 01:21:04,690 [wrapper] apfmon messages muted
[2025-06-03 21:21:04] 2025-06-04 01:21:04,694 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:21:04] 2025-06-04 01:21:04,698 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:21:04]  *** Error codes and diagnostics ***
[2025-06-03 21:21:04]     "exeErrorCode": 0,
[2025-06-03 21:21:04]     "exeErrorDiag": "",
[2025-06-03 21:21:04]     "pilotErrorCode": 0,
[2025-06-03 21:21:04]     "pilotErrorDiag": "",
[2025-06-03 21:21:04]  *** Listing of results directory ***
[2025-06-03 21:21:04] total 384968
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 14:30 queuedata.json
[2025-06-03 21:21:04] -rwx------ 1 boincer umatlas     37140 Jun  3 14:30 runpilot2-wrapper.sh
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas       100 Jun  3 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:21:04] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 20:17 run_atlas
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas       105 Jun  3 20:17 job.xml
[2025-06-03 21:21:04] -rw-r--r-- 2 boincer umatlas 213426457 Jun  3 20:17 EVNT.45006593._001693.pool.root.1
[2025-06-03 21:21:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 20:17 start_atlas.sh
[2025-06-03 21:21:04] drwxrwx--x 2 boincer umatlas      4096 Jun  3 20:17 shared
[2025-06-03 21:21:04] -rw-r--r-- 2 boincer umatlas    508876 Jun  3 20:17 input.tar.gz
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas         0 Jun  3 20:17 boinc_lockfile
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 20:17 pandaJob.out
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas    986077 Jun  3 20:17 agis_schedconf.cvmfs.json
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas   1603667 Jun  3 20:17 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:21:04] drwx------ 4 boincer umatlas      4096 Jun  3 20:17 pilot3
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas      5868 Jun  3 21:13 init_data.xml
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas 175487767 Jun  3 21:20 HITS.45006595._042212.pool.root.1
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas       529 Jun  3 21:20 boinc_task_state.xml
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas      1048 Jun  3 21:20 memory_monitor_summary.json
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas        95 Jun  3 21:20 pilot_heartbeat.json
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas    359677 Jun  3 21:20 log.45006595._042212.job.log.tgz.1
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 21:20 boinc_mmap_file
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas        27 Jun  3 21:20 wrapper_checkpoint.txt
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas      7749 Jun  3 21:20 heartbeat.json
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas      4476 Jun  3 21:21 pilotlog.txt
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas    371696 Jun  3 21:21 log.45006595._042212.job.log.1
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas       357 Jun  3 21:21 output.list
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas       620 Jun  3 21:21 runtime_log
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas    747520 Jun  3 21:21 result.tar.gz
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 21:21 runtime_log.err
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas       659 Jun  3 21:21 ks8KDmUalg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiglKDmUHh1Dm.diag
[2025-06-03 21:21:04] -rw-r--r-- 1 boincer umatlas     21368 Jun  3 21:21 stderr.txt
[2025-06-03 21:21:04] HITS file was successfully produced:
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas 175487767 Jun  3 21:20 shared/HITS.pool.root.1
[2025-06-03 21:21:04]  *** Contents of shared directory: ***
[2025-06-03 21:21:04] total 381056
[2025-06-03 21:21:04] -rw-r--r-- 2 boincer umatlas 213426457 Jun  3 20:17 ATLAS.root_0
[2025-06-03 21:21:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 20:17 start_atlas.sh
[2025-06-03 21:21:04] -rw-r--r-- 2 boincer umatlas    508876 Jun  3 20:17 input.tar.gz
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas 175487767 Jun  3 21:20 HITS.pool.root.1
[2025-06-03 21:21:04] -rw------- 1 boincer umatlas    747520 Jun  3 21:21 result.tar.gz
21:21:06 (22610): run_atlas exited; CPU time 40412.887340
21:21:06 (22610): called boinc_finish(0)

</stderr_txt>
]]>

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