Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
12:53:38 (1716061): wrapper (7.7.26015): starting
12:53:38 (1716061): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 12:53:38] Arguments: --nthreads 12
[2025-06-05 12:53:38] Threads: 12
[2025-06-05 12:53:38] Checking for CVMFS
[2025-06-05 12:53:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:53:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:53:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:53:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:53:39] 2.12.7.0 600724 3947 59468 146816 2 56 3869431 4096001 0 130560 0 3100967 99.991 919974 240 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 12:53:39] CVMFS is ok
[2025-06-05 12:53:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:53:39] Checking for apptainer binary...
[2025-06-05 12:53:39] apptainer is not installed, using version from CVMFS
[2025-06-05 12:53:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:53:39] lithium
[2025-06-05 12:53:39] apptainer works
[2025-06-05 12:53:39] Set ATHENA_PROC_NUMBER=12
[2025-06-05 12:53:39] Set ATHENA_CORE_NUMBER=12
[2025-06-05 12:53:39] Starting ATLAS job with PandaID=6678070811
[2025-06-05 12:53:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:19:10]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:19:10] 2025-06-05 12:18:07,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:08,853 | INFO     | PID=1719788 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 14:19:10] 2025-06-05 12:18:09,941 | INFO     | monitor loop #385: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:09,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:12,444 | INFO     | monitor loop #386: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:12,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:14,948 | INFO     | monitor loop #387: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:14,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:17,452 | INFO     | monitor loop #388: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:17,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:19,956 | INFO     | monitor loop #389: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:19,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:22,457 | INFO     | monitor loop #390: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:22,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:24,961 | INFO     | monitor loop #391: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:24,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:27,465 | INFO     | monitor loop #392: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:27,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:29,969 | INFO     | monitor loop #393: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:29,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:31,021 | INFO     | PID=1719788 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 14:19:10] 2025-06-05 12:18:32,473 | INFO     | monitor loop #394: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:32,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:34,977 | INFO     | monitor loop #395: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:34,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:36,029 | INFO     | 5090s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 14:19:10] 2025-06-05 12:18:37,481 | INFO     | monitor loop #396: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:37,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:39,985 | INFO     | monitor loop #397: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:39,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:42,489 | INFO     | monitor loop #398: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:42,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:44,993 | INFO     | monitor loop #399: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:44,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:47,497 | INFO     | monitor loop #400: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:47,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:50,001 | INFO     | monitor loop #401: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:50,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:52,504 | INFO     | monitor loop #402: job 0:6678070811 is in state 'finished'
[2025-06-05 14:19:10] 2025-06-05 12:18:52,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:19:10] 2025-06-05 12:18:53,183 | INFO     | PID=1719788 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 14:19:10] 2025-06-05 12:18:54,978 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 14:19:10] 2025-06-05 12:18:54,978 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678070811/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:19:10] 2025-06-05 12:18:54,979 | INFO     | extracted standard info from prmon json
[2025-06-05 14:19:10] 2025-06-05 12:18:54,979 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:19:10] 2025-06-05 12:18:54,979 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:19:10] 2025-06-05 12:18:54,979 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:19:10] 2025-06-05 12:18:54,980 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:19:10] 2025-06-05 12:18:54,981 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:19:10] 2025-06-05 12:18:54,981 | INFO     | sum of square deviations: 130793150.0
[2025-06-05 14:19:10] 2025-06-05 12:18:54,982 | INFO     | sum of deviations: -16396480665.0
[2025-06-05 14:19:10] 2025-06-05 12:18:54,982 | INFO     | mean x: 1749123416.0
[2025-06-05 14:19:10] 2025-06-05 12:18:54,982 | INFO     | mean y: 2872194.546666667
[2025-06-05 14:19:10] 2025-06-05 12:18:54,982 | INFO     | -- intersect: 219276345393.58463
[2025-06-05 14:19:10] 2025-06-05 12:18:54,982 | INFO     | intersect: 219276345393.58463
[2025-06-05 14:19:10] 2025-06-05 12:18:54,982 | INFO     | chi2: 0.11768216590244274
[2025-06-05 14:19:10] 2025-06-05 12:18:54,982 | INFO     | -- intersect: 219276345393.58463
[2025-06-05 14:19:10] 2025-06-05 12:18:54,982 | INFO     | current memory leak: -125.36 B/s (using 75 data points, chi2=0.12)
[2025-06-05 14:19:10] 2025-06-05 12:18:54,983 | INFO     | ..............................
[2025-06-05 14:19:10] 2025-06-05 12:18:54,983 | INFO     | . Timing measurements:
[2025-06-05 14:19:10] 2025-06-05 12:18:54,983 | INFO     | . get job = 0 s
[2025-06-05 14:19:10] 2025-06-05 12:18:54,983 | INFO     | . initial setup = 4 s
[2025-06-05 14:19:10] 2025-06-05 12:18:54,983 | INFO     | . payload setup = 5 s
[2025-06-05 14:19:10] 2025-06-05 12:18:54,983 | INFO     | . stage-in = 0 s
[2025-06-05 14:19:10] 2025-06-05 12:18:54,983 | INFO     | . payload execution = 5000 s
[2025-06-05 14:19:10] 2025-06-05 12:18:54,983 | INFO     | . stage-out = 0 s
[2025-06-05 14:19:10] 2025-06-05 12:18:54,983 | INFO     | . log creation = 0 s
[2025-06-05 14:19:10] 2025-06-05 12:18:54,984 | INFO     | ..............................
[2025-06-05 14:19:10] 2025-06-05 12:18:55,062 | INFO     | 
[2025-06-05 14:19:10] 2025-06-05 12:18:55,063 | INFO     | job summary report
[2025-06-05 14:19:10] 2025-06-05 12:18:55,063 | INFO     | --------------------------------------------------
[2025-06-05 14:19:10] 2025-06-05 12:18:55,063 | INFO     | PanDA job id: 6678070811
[2025-06-05 14:19:10] 2025-06-05 12:18:55,063 | INFO     | task id: 45006595
[2025-06-05 14:19:10] 2025-06-05 12:18:55,063 | INFO     | errors: (none)
[2025-06-05 14:19:10] 2025-06-05 12:18:55,063 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:19:10] 2025-06-05 12:18:55,063 | INFO     | pilot state: finished 
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | transexitcode: 0
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | exeerrorcode: 0
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | exeerrordiag: 
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | exitcode: 0
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | exitmsg: OK
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | cpuconsumptiontime: 55662 s
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | nevents: 400
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | neventsw: 0
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | pid: 1726424
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | pgrp: 1726424
[2025-06-05 14:19:10] 2025-06-05 12:18:55,064 | INFO     | corecount: 12
[2025-06-05 14:19:10] 2025-06-05 12:18:55,065 | INFO     | event service: False
[2025-06-05 14:19:10] 2025-06-05 12:18:55,065 | INFO     | sizes: {0: 2397297, 3: 2397503, 11: 2397531, 5010: 2423641, 5012: 2432652, 5090: 2432766}
[2025-06-05 14:19:10] 2025-06-05 12:18:55,065 | INFO     | --------------------------------------------------
[2025-06-05 14:19:10] 2025-06-05 12:18:55,065 | INFO     | 
[2025-06-05 14:19:10] 2025-06-05 12:18:55,065 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 14:19:10] 2025-06-05 12:18:55,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,084 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:19:10] 2025-06-05 12:18:55,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,084 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:19:10] 2025-06-05 12:18:55,084 | INFO     | job 6678070811 has completed (purged errors)
[2025-06-05 14:19:10] 2025-06-05 12:18:55,084 | INFO     | overall cleanup function is called
[2025-06-05 14:19:10] 2025-06-05 12:18:56,091 | INFO     | --- collectZombieJob: --- 10, [1726424]
[2025-06-05 14:19:10] 2025-06-05 12:18:56,091 | INFO     | zombie collector waiting for pid 1726424
[2025-06-05 14:19:10] 2025-06-05 12:18:56,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:19:10] 2025-06-05 12:18:56,092 | INFO     | collected zombie processes
[2025-06-05 14:19:10] 2025-06-05 12:18:56,092 | INFO     | will attempt to kill all subprocesses of pid=1726424
[2025-06-05 14:19:10] 2025-06-05 12:18:56,172 | INFO     | process IDs to be killed: [1726424] (in reverse order)
[2025-06-05 14:19:10] 2025-06-05 12:18:56,214 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:19:10] 2025-06-05 12:18:56,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:19:10] 2025-06-05 12:18:56,217 | INFO     | did not find any defunct processes belonging to 1726424
[2025-06-05 14:19:10] 2025-06-05 12:18:56,220 | INFO     | did not find any defunct processes belonging to 1726424
[2025-06-05 14:19:10] 2025-06-05 12:18:56,220 | INFO     | ready for new job
[2025-06-05 14:19:10] 2025-06-05 12:18:56,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:19:10] 2025-06-05 12:18:56,221 | INFO     | **************************************
[2025-06-05 14:19:10] 2025-06-05 12:18:56,221 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:19:10] 2025-06-05 12:18:56,221 | INFO     | **************************************
[2025-06-05 14:19:10] 2025-06-05 12:18:56,221 | INFO     | 
[2025-06-05 14:19:10] 2025-06-05 12:18:56,243 | INFO     | architecture information:
[2025-06-05 14:19:10] 2025-06-05 12:18:56,243 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:19:10] 2025-06-05 12:18:56,254 | INFO     | cat /etc/os-release:
[2025-06-05 14:19:10] NAME="CentOS Linux"
[2025-06-05 14:19:10] VERSION="7 (Core)"
[2025-06-05 14:19:10] ID="centos"
[2025-06-05 14:19:10] ID_LIKE="rhel fedora"
[2025-06-05 14:19:10] VERSION_ID="7"
[2025-06-05 14:19:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:19:10] ANSI_COLOR="0;31"
[2025-06-05 14:19:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:19:10] HOME_URL="https://www.centos.org/"
[2025-06-05 14:19:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:19:10] 
[2025-06-05 14:19:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:19:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:19:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:19:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:19:10] 
[2025-06-05 14:19:10] 2025-06-05 12:18:56,254 | INFO     | **************************************
[2025-06-05 14:19:10] 2025-06-05 12:18:56,757 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 14:19:10] 2025-06-05 12:18:56,770 | INFO     | sufficient remaining disk space (33274462208 B)
[2025-06-05 14:19:10] 2025-06-05 12:18:56,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:19:10] 2025-06-05 12:18:56,770 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:19:10] 2025-06-05 12:18:56,770 | INFO     | update_server=False
[2025-06-05 14:19:10] 2025-06-05 12:18:56,770 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:19:10] 2025-06-05 12:18:56,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:19:10] 2025-06-05 12:18:56,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:19:10] 2025-06-05 12:18:56,771 | INFO     | aborting loop
[2025-06-05 14:19:10] 2025-06-05 12:18:57,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:19:10] 2025-06-05 12:18:57,191 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:19:10] 2025-06-05 12:18:57,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:19:10] 2025-06-05 12:18:57,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:19:10] 2025-06-05 12:18:57,413 | INFO     | all job control threads have been joined
[2025-06-05 14:19:10] 2025-06-05 12:18:57,636 | INFO     | all data control threads have been joined
[2025-06-05 14:19:10] 2025-06-05 12:18:57,773 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:57,776 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:57,777 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:57,876 | INFO     | all payload control threads have been joined
[2025-06-05 14:19:10] 2025-06-05 12:18:57,886 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:58,029 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:58,086 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:58,130 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:58,419 | INFO     | [job] control thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:58,641 | INFO     | [data] control thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:58,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:58,827 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:58,882 | INFO     | [payload] control thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:58,961 | INFO     | [job] validate thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:59,049 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:59,185 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:18:59,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:19:10] 2025-06-05 12:19:03,702 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:19:10] 2025-06-05 12:19:05,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140227214866240)>', '<ExcThread(monitor, started 140226638894848)>']
[2025-06-05 14:19:10] 2025-06-05 12:19:06,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:19:10] 2025-06-05 12:19:06,237 | INFO     | [monitor] control thread has ended
[2025-06-05 14:19:10] 2025-06-05 12:19:10,569 | INFO     | all workflow threads have been joined
[2025-06-05 14:19:10] 2025-06-05 12:19:10,569 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:19:10] 2025-06-05 12:19:10,570 | INFO     | traces error code: 0
[2025-06-05 14:19:10] 2025-06-05 12:19:10,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:19:10] 2025-06-05 12:19:10,660 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:19:10] 2025-06-05 12:19:10,663 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:19:10] 2025-06-05 12:19:10,666 [wrapper] pilotpid: 1719788
[2025-06-05 14:19:10] 2025-06-05 12:19:10,668 [wrapper] Pilot exit status: 0
[2025-06-05 14:19:10] 2025-06-05 12:19:10,677 [wrapper] pandaids: 6678070811
[2025-06-05 14:19:10] 2025-06-05 12:19:10,702 [wrapper] cleanup supervisor_pilot 1738205 1719789
[2025-06-05 14:19:10] 2025-06-05 12:19:10,705 [wrapper] Test setup, not cleaning
[2025-06-05 14:19:10] 2025-06-05 12:19:10,707 [wrapper] apfmon messages muted
[2025-06-05 14:19:10] 2025-06-05 12:19:10,709 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:19:10] 2025-06-05 12:19:10,711 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:19:10]  *** Error codes and diagnostics ***
[2025-06-05 14:19:10]     "exeErrorCode": 0,
[2025-06-05 14:19:10]     "exeErrorDiag": "",
[2025-06-05 14:19:10]     "pilotErrorCode": 0,
[2025-06-05 14:19:10]     "pilotErrorDiag": "",
[2025-06-05 14:19:10]  *** Listing of results directory ***
[2025-06-05 14:19:10] total 387708
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:09 pilot3.tar.gz
[2025-06-05 14:19:10] -rwx------ 1 boinc boinc     37140 Jun  3 22:10 runpilot2-wrapper.sh
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:10 queuedata.json
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc       100 Jun  5 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:19:10] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 12:53 run_atlas
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc       105 Jun  5 12:53 job.xml
[2025-06-05 14:19:10] -rw-r--r-- 2 boinc boinc     15093 Jun  5 12:53 start_atlas.sh
[2025-06-05 14:19:10] drwxrwx--x 2 boinc boinc      4096 Jun  5 12:53 shared
[2025-06-05 14:19:10] -rw-r--r-- 2 boinc boinc    508883 Jun  5 12:53 input.tar.gz
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc      6048 Jun  5 12:53 init_data.xml
[2025-06-05 14:19:10] -rw-r--r-- 2 boinc boinc 213075972 Jun  5 12:53 EVNT.45006593._000472.pool.root.1
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc         0 Jun  5 12:53 boinc_lockfile
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc      2524 Jun  5 12:53 pandaJob.out
[2025-06-05 14:19:10] -rw------- 1 boinc boinc    982836 Jun  5 12:53 agis_schedconf.cvmfs.json
[2025-06-05 14:19:10] -rw------- 1 boinc boinc   1598969 Jun  5 12:53 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:19:10] drwx------ 4 boinc boinc      4096 Jun  5 12:53 pilot3
[2025-06-05 14:19:10] -rw------- 1 boinc boinc 178427847 Jun  5 14:17 HITS.45006595._044686.pool.root.1
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc       529 Jun  5 14:17 boinc_task_state.xml
[2025-06-05 14:19:10] -rw------- 1 boinc boinc      1062 Jun  5 14:17 memory_monitor_summary.json
[2025-06-05 14:19:10] -rw------- 1 boinc boinc    358003 Jun  5 14:17 log.45006595._044686.job.log.tgz.1
[2025-06-05 14:19:10] -rw------- 1 boinc boinc        95 Jun  5 14:18 pilot_heartbeat.json
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc      8192 Jun  5 14:18 boinc_mmap_file
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc        27 Jun  5 14:18 wrapper_checkpoint.txt
[2025-06-05 14:19:10] -rw------- 1 boinc boinc      7737 Jun  5 14:18 heartbeat.json
[2025-06-05 14:19:10] -rw------- 1 boinc boinc      4360 Jun  5 14:19 pilotlog.txt
[2025-06-05 14:19:10] -rw------- 1 boinc boinc    482877 Jun  5 14:19 log.45006595._044686.job.log.1
[2025-06-05 14:19:10] -rw------- 1 boinc boinc       357 Jun  5 14:19 output.list
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc       620 Jun  5 14:19 runtime_log
[2025-06-05 14:19:10] -rw------- 1 boinc boinc    860160 Jun  5 14:19 result.tar.gz
[2025-06-05 14:19:10] -rw------- 1 boinc boinc       653 Jun  5 14:19 V5XMDm08mg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrqZKDmD78gKo.diag
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc      8716 Jun  5 14:19 runtime_log.err
[2025-06-05 14:19:10] -rw-r--r-- 1 boinc boinc     22315 Jun  5 14:19 stderr.txt
[2025-06-05 14:19:10] HITS file was successfully produced:
[2025-06-05 14:19:10] -rw------- 1 boinc boinc 178427847 Jun  5 14:17 shared/HITS.pool.root.1
[2025-06-05 14:19:10]  *** Contents of shared directory: ***
[2025-06-05 14:19:10] total 383696
[2025-06-05 14:19:10] -rw-r--r-- 2 boinc boinc     15093 Jun  5 12:53 start_atlas.sh
[2025-06-05 14:19:10] -rw-r--r-- 2 boinc boinc    508883 Jun  5 12:53 input.tar.gz
[2025-06-05 14:19:10] -rw-r--r-- 2 boinc boinc 213075972 Jun  5 12:53 ATLAS.root_0
[2025-06-05 14:19:10] -rw------- 1 boinc boinc 178427847 Jun  5 14:17 HITS.pool.root.1
[2025-06-05 14:19:10] -rw------- 1 boinc boinc    860160 Jun  5 14:19 result.tar.gz
14:19:12 (1716061): run_atlas exited; CPU time 55560.300853
14:19:12 (1716061): called boinc_finish(0)

</stderr_txt>
]]>

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