Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:48:17 (28622): wrapper (7.7.26015): starting
10:48:17 (28622): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:48:17] Arguments: --nthreads 8
[2025-06-04 10:48:17] Threads: 8
[2025-06-04 10:48:17] Checking for CVMFS
[2025-06-04 10:48:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:48:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:48:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:48:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:48:20] 2.11.2.0 31576 32988 99080 146773 3 59 20186565 25165825 3907 130560 0 17001941 99.825 18830482 2060 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:48:20] CVMFS is ok
[2025-06-04 10:48:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:48:20] Checking for apptainer binary...
[2025-06-04 10:48:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:48:20] Running /usr/bin/apptainer --version
[2025-06-04 10:48:20] apptainer version 1.3.2-1.el7
[2025-06-04 10:48:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:48:33] cg-vwn347.simple-grid.lan
[2025-06-04 10:48:33] apptainer works
[2025-06-04 10:48:34] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:48:34] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:48:34] Starting ATLAS job with PandaID=6678015309
[2025-06-04 10:48:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:49:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:49:39] 2025-06-04 12:49:14,076 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6678015309/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:49:39] 2025-06-04 12:49:14,077 | INFO     | extracted standard info from prmon json
[2025-06-04 14:49:39] 2025-06-04 12:49:14,077 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:49:39] 2025-06-04 12:49:14,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:49:39] 2025-06-04 12:49:14,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:49:39] 2025-06-04 12:49:14,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:49:39] 2025-06-04 12:49:14,082 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:49:39] 2025-06-04 12:49:14,083 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,085 | INFO     | sum of deviations: 100876135112.99998
[2025-06-04 14:49:39] 2025-06-04 12:49:14,085 | INFO     | mean x: 1749034425.5
[2025-06-04 14:49:39] 2025-06-04 12:49:14,085 | INFO     | mean y: 2406162.160714286
[2025-06-04 14:49:39] 2025-06-04 12:49:14,085 | INFO     | -- intersect: -50623518534.28066
[2025-06-04 14:49:39] 2025-06-04 12:49:14,085 | INFO     | intersect: -50623518534.28066
[2025-06-04 14:49:39] 2025-06-04 12:49:14,094 | INFO     | chi2: 7.001140675313415
[2025-06-04 14:49:39] 2025-06-04 12:49:14,095 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,096 | INFO     | sum of deviations: 112950517447.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,096 | INFO     | mean x: 1749034273.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,097 | INFO     | mean y: 2414052.3515981734
[2025-06-04 14:49:39] 2025-06-04 12:49:14,097 | INFO     | -- intersect: -60655131262.451965
[2025-06-04 14:49:39] 2025-06-04 12:49:14,097 | INFO     | intersect: -60655131262.451965
[2025-06-04 14:49:39] 2025-06-04 12:49:14,097 | INFO     | chi2: 6.290907949240634
[2025-06-04 14:49:39] 2025-06-04 12:49:14,097 | INFO     | current chi2=6.290907949240634 (change=10.144528713401213 %)
[2025-06-04 14:49:39] 2025-06-04 12:49:14,097 | INFO     | right removable region: 218
[2025-06-04 14:49:39] 2025-06-04 12:49:14,098 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,100 | INFO     | sum of deviations: 25671947112.00001
[2025-06-04 14:49:39] 2025-06-04 12:49:14,100 | INFO     | mean x: 1749034578.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,100 | INFO     | mean y: 2456371.02283105
[2025-06-04 14:49:39] 2025-06-04 12:49:14,100 | INFO     | -- intersect: -13784090180.59578
[2025-06-04 14:49:39] 2025-06-04 12:49:14,100 | INFO     | intersect: -13784090180.59578
[2025-06-04 14:49:39] 2025-06-04 12:49:14,100 | INFO     | chi2: 2.3306898484605223
[2025-06-04 14:49:39] 2025-06-04 12:49:14,101 | INFO     | current chi2=2.3306898484605223 (change=66.70985548571075 %)
[2025-06-04 14:49:39] 2025-06-04 12:49:14,101 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 14:49:39] 2025-06-04 12:49:14,103 | INFO     | sum of deviations: -14885916559.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,103 | INFO     | mean x: 1749034730.5
[2025-06-04 14:49:39] 2025-06-04 12:49:14,103 | INFO     | mean y: 2484592.5887850467
[2025-06-04 14:49:39] 2025-06-04 12:49:14,103 | INFO     | -- intersect: 8570174763.527753
[2025-06-04 14:49:39] 2025-06-04 12:49:14,103 | INFO     | intersect: 8570174763.527753
[2025-06-04 14:49:39] 2025-06-04 12:49:14,103 | INFO     | chi2: 0.8651282744567099
[2025-06-04 14:49:39] 2025-06-04 12:49:14,104 | INFO     | current chi2=0.8651282744567099 (change=62.88102104069539 %)
[2025-06-04 14:49:39] 2025-06-04 12:49:14,104 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,106 | INFO     | sum of deviations: -14959452181.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,106 | INFO     | mean x: 1749034883.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,106 | INFO     | mean y: 2484588.6459330143
[2025-06-04 14:49:39] 2025-06-04 12:49:14,106 | INFO     | -- intersect: 9245354088.182531
[2025-06-04 14:49:39] 2025-06-04 12:49:14,106 | INFO     | intersect: 9245354088.182531
[2025-06-04 14:49:39] 2025-06-04 12:49:14,106 | INFO     | chi2: 0.8360197696997868
[2025-06-04 14:49:39] 2025-06-04 12:49:14,107 | INFO     | current chi2=0.8360197696997868 (change=3.3646461012042357 %)
[2025-06-04 14:49:39] 2025-06-04 12:49:14,107 | INFO     | left removable region: 30
[2025-06-04 14:49:39] 2025-06-04 12:49:14,107 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,118 | INFO     | sum of deviations: 3702571229.0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,118 | INFO     | mean x: 1749035157.5
[2025-06-04 14:49:39] 2025-06-04 12:49:14,118 | INFO     | mean y: 2491069.159574468
[2025-06-04 14:49:39] 2025-06-04 12:49:14,118 | INFO     | -- intersect: -3140638450.9015183
[2025-06-04 14:49:39] 2025-06-04 12:49:14,118 | INFO     | intersect: -3140638450.9015183
[2025-06-04 14:49:39] 2025-06-04 12:49:14,119 | INFO     | chi2: 0.00034520291209322405
[2025-06-04 14:49:39] 2025-06-04 12:49:14,119 | INFO     | -- intersect: -3140638450.9015183
[2025-06-04 14:49:39] 2025-06-04 12:49:14,119 | INFO     | current memory leak: 1.80 B/s (using 188 data points, chi2=0.00)
[2025-06-04 14:49:39] 2025-06-04 12:49:14,120 | INFO     | ..............................
[2025-06-04 14:49:39] 2025-06-04 12:49:14,120 | INFO     | . Timing measurements:
[2025-06-04 14:49:39] 2025-06-04 12:49:14,120 | INFO     | . get job = 0 s
[2025-06-04 14:49:39] 2025-06-04 12:49:14,120 | INFO     | . initial setup = 22 s
[2025-06-04 14:49:39] 2025-06-04 12:49:14,120 | INFO     | . payload setup = 164 s
[2025-06-04 14:49:39] 2025-06-04 12:49:14,120 | INFO     | . stage-in = 0 s
[2025-06-04 14:49:39] 2025-06-04 12:49:14,120 | INFO     | . payload execution = 13777 s
[2025-06-04 14:49:39] 2025-06-04 12:49:14,121 | INFO     | . stage-out = 11 s
[2025-06-04 14:49:39] 2025-06-04 12:49:14,121 | INFO     | . log creation = 1 s
[2025-06-04 14:49:39] 2025-06-04 12:49:14,121 | INFO     | ..............................
[2025-06-04 14:49:39] 2025-06-04 12:49:14,296 | INFO     | 
[2025-06-04 14:49:39] 2025-06-04 12:49:14,296 | INFO     | job summary report
[2025-06-04 14:49:39] 2025-06-04 12:49:14,296 | INFO     | --------------------------------------------------
[2025-06-04 14:49:39] 2025-06-04 12:49:14,296 | INFO     | PanDA job id: 6678015309
[2025-06-04 14:49:39] 2025-06-04 12:49:14,296 | INFO     | task id: 45006595
[2025-06-04 14:49:39] 2025-06-04 12:49:14,296 | INFO     | errors: (none)
[2025-06-04 14:49:39] 2025-06-04 12:49:14,296 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | pilot state: finished 
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | transexitcode: 0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | exeerrorcode: 0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | exeerrordiag: 
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | exitcode: 0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | exitmsg: OK
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | cpuconsumptiontime: 50956 s
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | nevents: 400
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | neventsw: 0
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | pid: 10647
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | pgrp: 10647
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | corecount: 8
[2025-06-04 14:49:39] 2025-06-04 12:49:14,297 | INFO     | event service: False
[2025-06-04 14:49:39] 2025-06-04 12:49:14,298 | INFO     | sizes: {0: 2404305, 1: 2404991, 2: 2405190, 13: 2405190, 24: 2405246, 34: 2405274, 45: 2405430, 56: 2405458, 67: 2405486, 77: 2405514, 88: 2405570, 90: 2406084, 99
[2025-06-04 14:49:39] 2025-06-04 12:49:14,298 | INFO     | --------------------------------------------------
[2025-06-04 14:49:39] 2025-06-04 12:49:14,298 | INFO     | 
[2025-06-04 14:49:39] 2025-06-04 12:49:14,298 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 14:49:39] 2025-06-04 12:49:14,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,595 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:49:39] 2025-06-04 12:49:14,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,597 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:49:39] 2025-06-04 12:49:14,597 | INFO     | job 6678015309 has completed (purged errors)
[2025-06-04 14:49:39] 2025-06-04 12:49:14,597 | INFO     | overall cleanup function is called
[2025-06-04 14:49:39] 2025-06-04 12:49:15,606 | INFO     | --- collectZombieJob: --- 10, [10647]
[2025-06-04 14:49:39] 2025-06-04 12:49:15,607 | INFO     | zombie collector waiting for pid 10647
[2025-06-04 14:49:39] 2025-06-04 12:49:15,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:49:39] 2025-06-04 12:49:15,607 | INFO     | collected zombie processes
[2025-06-04 14:49:39] 2025-06-04 12:49:15,607 | INFO     | will attempt to kill all subprocesses of pid=10647
[2025-06-04 14:49:39] 2025-06-04 12:49:15,738 | INFO     | process IDs to be killed: [10647] (in reverse order)
[2025-06-04 14:49:39] 2025-06-04 12:49:16,661 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:49:39] 2025-06-04 12:49:16,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:49:39] 2025-06-04 12:49:16,665 | INFO     | did not find any defunct processes belonging to 10647
[2025-06-04 14:49:39] 2025-06-04 12:49:16,668 | INFO     | did not find any defunct processes belonging to 10647
[2025-06-04 14:49:39] 2025-06-04 12:49:16,669 | INFO     | ready for new job
[2025-06-04 14:49:39] 2025-06-04 12:49:16,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:49:39] 2025-06-04 12:49:16,671 | INFO     | **************************************
[2025-06-04 14:49:39] 2025-06-04 12:49:16,671 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:49:39] 2025-06-04 12:49:16,671 | INFO     | **************************************
[2025-06-04 14:49:39] 2025-06-04 12:49:16,671 | INFO     | 
[2025-06-04 14:49:39] 2025-06-04 12:49:16,672 | INFO     | pilot is running in a VM
[2025-06-04 14:49:39] 2025-06-04 12:49:16,672 | INFO     | architecture information:
[2025-06-04 14:49:39] 2025-06-04 12:49:16,681 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:49:39] 2025-06-04 12:49:16,958 | INFO     | cat /etc/os-release:
[2025-06-04 14:49:39] NAME="CentOS Linux"
[2025-06-04 14:49:39] VERSION="7 (Core)"
[2025-06-04 14:49:39] ID="centos"
[2025-06-04 14:49:39] ID_LIKE="rhel fedora"
[2025-06-04 14:49:39] VERSION_ID="7"
[2025-06-04 14:49:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:49:39] ANSI_COLOR="0;31"
[2025-06-04 14:49:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:49:39] HOME_URL="https://www.centos.org/"
[2025-06-04 14:49:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:49:39] 
[2025-06-04 14:49:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:49:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:49:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:49:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:49:39] 
[2025-06-04 14:49:39] 2025-06-04 12:49:16,958 | INFO     | **************************************
[2025-06-04 14:49:39] 2025-06-04 12:49:17,462 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 14:49:39] 2025-06-04 12:49:17,684 | INFO     | sufficient remaining disk space (496458792960 B)
[2025-06-04 14:49:39] 2025-06-04 12:49:17,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:49:39] 2025-06-04 12:49:17,685 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:49:39] 2025-06-04 12:49:17,685 | INFO     | update_server=False
[2025-06-04 14:49:39] 2025-06-04 12:49:17,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:49:39] 2025-06-04 12:49:17,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:49:39] 2025-06-04 12:49:17,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:49:39] 2025-06-04 12:49:17,686 | INFO     | aborting loop
[2025-06-04 14:49:39] 2025-06-04 12:49:17,735 | INFO     | all data control threads have been joined
[2025-06-04 14:49:39] 2025-06-04 12:49:17,831 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:49:39] 2025-06-04 12:49:17,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:49:39] 2025-06-04 12:49:17,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:49:39] 2025-06-04 12:49:18,691 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:18,692 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:18,742 | INFO     | [data] control thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:18,845 | INFO     | all job control threads have been joined
[2025-06-04 14:49:39] 2025-06-04 12:49:18,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:49:39] 2025-06-04 12:49:18,931 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:18,981 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:19,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:19,053 | INFO     | all payload control threads have been joined
[2025-06-04 14:49:39] 2025-06-04 12:49:19,212 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:19,311 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:19,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:49:39] 2025-06-04 12:49:19,588 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:19,766 | INFO     | [job] validate thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:19,852 | INFO     | [job] control thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:20,060 | INFO     | [payload] control thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:20,234 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:20,321 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:20,903 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:21,693 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:49:39] 2025-06-04 12:49:23,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703896172352)>', '<ExcThread(monitor, started 140703321548544)>']
[2025-06-04 14:49:39] 2025-06-04 12:49:23,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:49:39] 2025-06-04 12:49:23,867 | INFO     | [monitor] control thread has ended
[2025-06-04 14:49:39] 2025-06-04 12:49:28,804 | INFO     | all workflow threads have been joined
[2025-06-04 14:49:39] 2025-06-04 12:49:28,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:49:39] 2025-06-04 12:49:28,804 | INFO     | traces error code: 0
[2025-06-04 14:49:39] 2025-06-04 12:49:28,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:49:39] 2025-06-04 12:49:29,058 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:49:39] 2025-06-04 12:49:29,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:49:39] 2025-06-04 12:49:29,183 [wrapper] pilotpid: 4043
[2025-06-04 14:49:39] 2025-06-04 12:49:29,186 [wrapper] Pilot exit status: 0
[2025-06-04 14:49:39] 2025-06-04 12:49:29,207 [wrapper] pandaids: 6678015309
[2025-06-04 14:49:39] 2025-06-04 12:49:29,252 [wrapper] cleanup supervisor_pilot 18417 4044
[2025-06-04 14:49:39] 2025-06-04 12:49:29,259 [wrapper] Test setup, not cleaning
[2025-06-04 14:49:39] 2025-06-04 12:49:29,263 [wrapper] apfmon messages muted
[2025-06-04 14:49:39] 2025-06-04 12:49:29,268 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:49:39] 2025-06-04 12:49:29,274 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:49:39]  *** Error codes and diagnostics ***
[2025-06-04 14:49:39]     "exeErrorCode": 0,
[2025-06-04 14:49:39]     "exeErrorDiag": "",
[2025-06-04 14:49:39]     "pilotErrorCode": 0,
[2025-06-04 14:49:39]     "pilotErrorDiag": "",
[2025-06-04 14:49:39]  *** Listing of results directory ***
[2025-06-04 14:49:39] total 395408
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:04 queuedata.json
[2025-06-04 14:49:39] -rwx------. 1 boinc boinc     37140 Jun  3 22:05 runpilot2-wrapper.sh
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:49:39] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:48 run_atlas
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:48 job.xml
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc      6392 Jun  4 10:48 init_data.xml
[2025-06-04 14:49:39] -rw-r--r--. 2 boinc boinc 216163858 Jun  4 10:48 EVNT.45006593._001780.pool.root.1
[2025-06-04 14:49:39] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:48 start_atlas.sh
[2025-06-04 14:49:39] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:48 shared
[2025-06-04 14:49:39] -rw-r--r--. 2 boinc boinc    508878 Jun  4 10:48 input.tar.gz
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:48 boinc_lockfile
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc      2524 Jun  4 10:48 pandaJob.out
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc    986774 Jun  4 10:51 agis_schedconf.cvmfs.json
[2025-06-04 14:49:39] drwx------. 4 boinc boinc      4096 Jun  4 10:52 pilot3
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc 181718244 Jun  4 14:46 HITS.45006595._044426.pool.root.1
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:46 boinc_task_state.xml
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc      1012 Jun  4 14:47 memory_monitor_summary.json
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc   1598969 Jun  4 14:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc    384313 Jun  4 14:47 log.45006595._044426.job.log.tgz.1
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc        95 Jun  4 14:48 pilot_heartbeat.json
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc      7685 Jun  4 14:49 heartbeat.json
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc      4417 Jun  4 14:49 pilotlog.txt
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc   1218091 Jun  4 14:49 log.45006595._044426.job.log.1
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc       357 Jun  4 14:49 output.list
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:49 runtime_log
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc   1617920 Jun  4 14:49 result.tar.gz
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc      8673 Jun  4 14:49 runtime_log.err
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc       656 Jun  4 14:49 dQdNDmw3mg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmHqZKDmDx4xln.diag
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:49 boinc_mmap_file
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:49 wrapper_checkpoint.txt
[2025-06-04 14:49:39] -rw-r--r--. 1 boinc boinc     20529 Jun  4 14:49 stderr.txt
[2025-06-04 14:49:39] HITS file was successfully produced:
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc 181718244 Jun  4 14:46 shared/HITS.pool.root.1
[2025-06-04 14:49:39]  *** Contents of shared directory: ***
[2025-06-04 14:49:39] total 390656
[2025-06-04 14:49:39] -rw-r--r--. 2 boinc boinc 216163858 Jun  4 10:48 ATLAS.root_0
[2025-06-04 14:49:39] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:48 start_atlas.sh
[2025-06-04 14:49:39] -rw-r--r--. 2 boinc boinc    508878 Jun  4 10:48 input.tar.gz
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc 181718244 Jun  4 14:46 HITS.pool.root.1
[2025-06-04 14:49:39] -rw-------. 1 boinc boinc   1617920 Jun  4 14:49 result.tar.gz
14:49:41 (28622): run_atlas exited; CPU time 51159.474611
14:49:41 (28622): called boinc_finish(0)

</stderr_txt>
]]>

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