Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:32:49 (3254116): wrapper (7.7.26015): starting
12:32:49 (3254116): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 12:32:49] Arguments: --nthreads 4
[2025-06-05 12:32:49] Threads: 4
[2025-06-05 12:32:49] Checking for CVMFS
[2025-06-05 12:32:49] No cvmfs_config command found, will try listing directly
[2025-06-05 12:32:49] CVMFS is ok
[2025-06-05 12:32:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 12:32:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 12:32:49] Further information can be found at the LHC@home message board.
[2025-06-05 12:32:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:32:49] Checking for apptainer binary...
[2025-06-05 12:32:49] which: no apptainer in ((null))
[2025-06-05 12:32:49] apptainer is not installed, using version from CVMFS
[2025-06-05 12:32:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:32:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-06-05 12:32:50] apptainer works
[2025-06-05 12:32:50] Set ATHENA_PROC_NUMBER=4
[2025-06-05 12:32:50] Set ATHENA_CORE_NUMBER=4
[2025-06-05 12:32:50] Starting ATLAS job with PandaID=6677978561
[2025-06-05 12:32:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:56:20]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:56:20] 2025-06-05 12:54:31,197 | INFO     | maximum number of monitored processes: 6
[2025-06-05 14:56:20] 2025-06-05 12:54:33,700 | INFO     | monitor loop #586: job 0:6677978561 is in state 'finished'
[2025-06-05 14:56:20] 2025-06-05 12:54:33,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:56:20] 2025-06-05 12:54:36,203 | INFO     | monitor loop #587: job 0:6677978561 is in state 'finished'
[2025-06-05 14:56:20] 2025-06-05 12:54:36,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:56:20] 2025-06-05 12:54:37,045 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 14:56:20] 2025-06-05 12:54:37,046 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6677978561/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:56:20] 2025-06-05 12:54:37,046 | INFO     | extracted standard info from prmon json
[2025-06-05 14:56:20] 2025-06-05 12:54:37,046 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:56:20] 2025-06-05 12:54:37,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:56:20] 2025-06-05 12:54:37,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:56:20] 2025-06-05 12:54:37,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:56:20] 2025-06-05 12:54:37,049 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:56:20] 2025-06-05 12:54:37,050 | INFO     | sum of square deviations: 832722590.0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,050 | INFO     | sum of deviations: 15838738328.0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,050 | INFO     | mean x: 1749123827.0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,051 | INFO     | mean y: 2307348.107913669
[2025-06-05 14:56:20] 2025-06-05 12:54:37,051 | INFO     | -- intersect: -33266772813.537445
[2025-06-05 14:56:20] 2025-06-05 12:54:37,051 | INFO     | intersect: -33266772813.537445
[2025-06-05 14:56:20] 2025-06-05 12:54:37,051 | INFO     | chi2: 1.592072048553706
[2025-06-05 14:56:20] 2025-06-05 12:54:37,051 | INFO     | sum of square deviations: 746051197.5
[2025-06-05 14:56:20] 2025-06-05 12:54:37,052 | INFO     | sum of deviations: 15260109377.5
[2025-06-05 14:56:20] 2025-06-05 12:54:37,052 | INFO     | mean x: 1749123674.5
[2025-06-05 14:56:20] 2025-06-05 12:54:37,052 | INFO     | mean y: 2306332.3656716417
[2025-06-05 14:56:20] 2025-06-05 12:54:37,052 | INFO     | -- intersect: -35775155961.22539
[2025-06-05 14:56:20] 2025-06-05 12:54:37,052 | INFO     | intersect: -35775155961.22539
[2025-06-05 14:56:20] 2025-06-05 12:54:37,053 | INFO     | chi2: 1.5942440065261736
[2025-06-05 14:56:20] 2025-06-05 12:54:37,053 | INFO     | current chi2=1.5942440065261736 (change=-0.1364233468228137 %)
[2025-06-05 14:56:20] 2025-06-05 12:54:37,053 | INFO     | right removable region: 133
[2025-06-05 14:56:20] 2025-06-05 12:54:37,053 | INFO     | sum of square deviations: 746051197.5
[2025-06-05 14:56:20] 2025-06-05 12:54:37,054 | INFO     | sum of deviations: -5241656738.999999
[2025-06-05 14:56:20] 2025-06-05 12:54:37,054 | INFO     | mean x: 1749123979.5
[2025-06-05 14:56:20] 2025-06-05 12:54:37,054 | INFO     | mean y: 2343863.6417910447
[2025-06-05 14:56:20] 2025-06-05 12:54:37,054 | INFO     | -- intersect: 12291456896.655415
[2025-06-05 14:56:20] 2025-06-05 12:54:37,054 | INFO     | intersect: 12291456896.655415
[2025-06-05 14:56:20] 2025-06-05 12:54:37,054 | INFO     | chi2: 0.003937493504257826
[2025-06-05 14:56:20] 2025-06-05 12:54:37,055 | INFO     | current chi2=0.003937493504257826 (change=99.75268119882924 %)
[2025-06-05 14:56:20] 2025-06-05 12:54:37,055 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,055 | INFO     | sum of deviations: -4649389987.999999
[2025-06-05 14:56:20] 2025-06-05 12:54:37,056 | INFO     | mean x: 1749124132.0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,056 | INFO     | mean y: 2342730.906976744
[2025-06-05 14:56:20] 2025-06-05 12:54:37,056 | INFO     | -- intersect: 12220202929.516817
[2025-06-05 14:56:20] 2025-06-05 12:54:37,056 | INFO     | intersect: 12220202929.516817
[2025-06-05 14:56:20] 2025-06-05 12:54:37,056 | INFO     | chi2: 0.0037870854986776885
[2025-06-05 14:56:20] 2025-06-05 12:54:37,056 | INFO     | current chi2=0.0037870854986776885 (change=3.8198921577265588 %)
[2025-06-05 14:56:20] 2025-06-05 12:54:37,056 | INFO     | left removable region: 20
[2025-06-05 14:56:20] 2025-06-05 12:54:37,056 | INFO     | sum of square deviations: 447383272.0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,057 | INFO     | sum of deviations: -2737428680.0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,057 | INFO     | mean x: 1749124254.0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,057 | INFO     | mean y: 2339107.6725663715
[2025-06-05 14:56:20] 2025-06-05 12:54:37,057 | INFO     | -- intersect: 10704802068.297531
[2025-06-05 14:56:20] 2025-06-05 12:54:37,057 | INFO     | intersect: 10704802068.297531
[2025-06-05 14:56:20] 2025-06-05 12:54:37,058 | INFO     | chi2: 0.0023585718695750225
[2025-06-05 14:56:20] 2025-06-05 12:54:37,058 | INFO     | -- intersect: 10704802068.297531
[2025-06-05 14:56:20] 2025-06-05 12:54:37,058 | INFO     | current memory leak: -6.12 B/s (using 113 data points, chi2=0.00)
[2025-06-05 14:56:20] 2025-06-05 12:54:37,058 | INFO     | ..............................
[2025-06-05 14:56:20] 2025-06-05 12:54:37,058 | INFO     | . Timing measurements:
[2025-06-05 14:56:20] 2025-06-05 12:54:37,058 | INFO     | . get job = 0 s
[2025-06-05 14:56:20] 2025-06-05 12:54:37,059 | INFO     | . initial setup = 1 s
[2025-06-05 14:56:20] 2025-06-05 12:54:37,059 | INFO     | . payload setup = 9 s
[2025-06-05 14:56:20] 2025-06-05 12:54:37,059 | INFO     | . stage-in = 0 s
[2025-06-05 14:56:20] 2025-06-05 12:54:37,059 | INFO     | . payload execution = 8453 s
[2025-06-05 14:56:20] 2025-06-05 12:54:37,059 | INFO     | . stage-out = 0 s
[2025-06-05 14:56:20] 2025-06-05 12:54:37,059 | INFO     | . log creation = 0 s
[2025-06-05 14:56:20] 2025-06-05 12:54:37,059 | INFO     | ..............................
[2025-06-05 14:56:20] 2025-06-05 12:54:37,152 | INFO     | 
[2025-06-05 14:56:20] 2025-06-05 12:54:37,152 | INFO     | job summary report
[2025-06-05 14:56:20] 2025-06-05 12:54:37,152 | INFO     | --------------------------------------------------
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | PanDA job id: 6677978561
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | task id: 45006595
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | errors: (none)
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | pilot state: finished 
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | transexitcode: 0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | exeerrorcode: 0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | exeerrordiag: 
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | exitcode: 0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | exitmsg: OK
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | cpuconsumptiontime: 32009 s
[2025-06-05 14:56:20] 2025-06-05 12:54:37,153 | INFO     | nevents: 400
[2025-06-05 14:56:20] 2025-06-05 12:54:37,154 | INFO     | neventsw: 0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,154 | INFO     | pid: 3265985
[2025-06-05 14:56:20] 2025-06-05 12:54:37,154 | INFO     | pgrp: 3265985
[2025-06-05 14:56:20] 2025-06-05 12:54:37,157 | INFO     | corecount: 4
[2025-06-05 14:56:20] 2025-06-05 12:54:37,157 | INFO     | event service: False
[2025-06-05 14:56:20] 2025-06-05 12:54:37,157 | INFO     | sizes: {0: 2397303, 7: 2397509, 11: 2397537, 8467: 2425692, 8469: 2434713, 8476: 2434827}
[2025-06-05 14:56:20] 2025-06-05 12:54:37,157 | INFO     | --------------------------------------------------
[2025-06-05 14:56:20] 2025-06-05 12:54:37,157 | INFO     | 
[2025-06-05 14:56:20] 2025-06-05 12:54:37,157 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-06-05 14:56:20] 2025-06-05 12:54:37,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,192 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,194 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:56:20] 2025-06-05 12:54:37,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:56:20] 2025-06-05 12:54:37,194 | INFO     | job 6677978561 has completed (purged errors)
[2025-06-05 14:56:20] 2025-06-05 12:54:37,195 | INFO     | overall cleanup function is called
[2025-06-05 14:56:20] 2025-06-05 12:54:38,203 | INFO     | --- collectZombieJob: --- 10, [3265985]
[2025-06-05 14:56:20] 2025-06-05 12:54:38,204 | INFO     | zombie collector waiting for pid 3265985
[2025-06-05 14:56:20] 2025-06-05 12:54:38,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:56:20] 2025-06-05 12:54:38,204 | INFO     | collected zombie processes
[2025-06-05 14:56:20] 2025-06-05 12:54:38,205 | INFO     | will attempt to kill all subprocesses of pid=3265985
[2025-06-05 14:56:20] 2025-06-05 12:54:39,002 | INFO     | PID=3258035 has CPU usage=21.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 14:56:20] 2025-06-05 12:54:39,002 | INFO     | .. there are 15 such processes running
[2025-06-05 14:56:20] 2025-06-05 12:54:39,444 | INFO     | process IDs to be killed: [3265985] (in reverse order)
[2025-06-05 14:56:20] 2025-06-05 12:54:39,703 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:56:20] 2025-06-05 12:54:39,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:56:20] 2025-06-05 12:54:39,735 | INFO     | did not find any defunct processes belonging to 3265985
[2025-06-05 14:56:20] 2025-06-05 12:54:39,764 | INFO     | did not find any defunct processes belonging to 3265985
[2025-06-05 14:56:20] 2025-06-05 12:54:39,765 | INFO     | ready for new job
[2025-06-05 14:56:20] 2025-06-05 12:54:39,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:56:20] 2025-06-05 12:54:39,767 | INFO     | **************************************
[2025-06-05 14:56:20] 2025-06-05 12:54:39,768 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:56:20] 2025-06-05 12:54:39,768 | INFO     | **************************************
[2025-06-05 14:56:20] 2025-06-05 12:54:39,768 | INFO     | 
[2025-06-05 14:56:20] 2025-06-05 12:54:39,776 | INFO     | architecture information:
[2025-06-05 14:56:20] 2025-06-05 12:54:39,776 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:56:20] 2025-06-05 12:54:39,802 | INFO     | cat /etc/os-release:
[2025-06-05 14:56:20] NAME="CentOS Linux"
[2025-06-05 14:56:20] VERSION="7 (Core)"
[2025-06-05 14:56:20] ID="centos"
[2025-06-05 14:56:20] ID_LIKE="rhel fedora"
[2025-06-05 14:56:20] VERSION_ID="7"
[2025-06-05 14:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:56:20] ANSI_COLOR="0;31"
[2025-06-05 14:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:56:20] HOME_URL="https://www.centos.org/"
[2025-06-05 14:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:56:20] 
[2025-06-05 14:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:56:20] 
[2025-06-05 14:56:20] 2025-06-05 12:54:39,803 | INFO     | **************************************
[2025-06-05 14:56:20] 2025-06-05 12:54:40,306 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-06-05 14:56:20] 2025-06-05 12:54:40,332 | INFO     | sufficient remaining disk space (3297674002432 B)
[2025-06-05 14:56:20] 2025-06-05 12:54:40,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:56:20] 2025-06-05 12:54:40,333 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:56:20] 2025-06-05 12:54:40,333 | INFO     | update_server=False
[2025-06-05 14:56:20] 2025-06-05 12:54:40,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:56:20] 2025-06-05 12:54:40,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:56:20] 2025-06-05 12:54:40,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:56:20] 2025-06-05 12:54:40,335 | INFO     | aborting loop
[2025-06-05 14:56:20] 2025-06-05 12:54:40,413 | INFO     | all data control threads have been joined
[2025-06-05 14:56:20] 2025-06-05 12:54:40,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:56:20] 2025-06-05 12:54:40,909 | INFO     | all job control threads have been joined
[2025-06-05 14:56:20] 2025-06-05 12:54:40,917 | INFO     | all payload control threads have been joined
[2025-06-05 14:56:20] 2025-06-05 12:54:41,008 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:56:20] 2025-06-05 12:54:41,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:56:20] 2025-06-05 12:54:41,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:56:20] 2025-06-05 12:54:41,338 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:41,341 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:41,418 | INFO     | [data] control thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:41,490 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:41,891 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:41,915 | INFO     | [job] control thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:41,923 | INFO     | [payload] control thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:42,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:56:20] 2025-06-05 12:54:42,169 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:42,177 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:42,340 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:42,652 | INFO     | [job] validate thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:42,692 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:42,770 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:43,168 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:44,546 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:50,761 | INFO     | job.realtimelogging is not enabled
[2025-06-05 14:56:20] 2025-06-05 12:54:51,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:56:20] 2025-06-05 12:54:52,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23367033726784)>', '<ExcThread(monitor, started 23366794704640)>']
[2025-06-05 14:56:20] 2025-06-05 12:54:53,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:56:20] 2025-06-05 12:54:53,057 | INFO     | [monitor] control thread has ended
[2025-06-05 14:56:20] 2025-06-05 12:54:57,981 | INFO     | all workflow threads have been joined
[2025-06-05 14:56:20] 2025-06-05 12:54:57,981 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:56:20] 2025-06-05 12:54:57,981 | INFO     | traces error code: 0
[2025-06-05 14:56:20] 2025-06-05 12:54:57,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:56:20] 2025-06-05 12:54:58,132 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:56:20] 2025-06-05 12:54:58,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:56:20] 2025-06-05 12:54:58,140 [wrapper] pilotpid: 3258035
[2025-06-05 14:56:20] 2025-06-05 12:54:58,144 [wrapper] Pilot exit status: 0
[2025-06-05 14:56:20] 2025-06-05 12:54:58,159 [wrapper] pandaids: 6677978561
[2025-06-05 14:56:20] 2025-06-05 12:54:58,310 [wrapper] cleanup supervisor_pilot 3724869 3258036
[2025-06-05 14:56:20] 2025-06-05 12:54:58,314 [wrapper] Test setup, not cleaning
[2025-06-05 14:56:20] 2025-06-05 12:54:58,318 [wrapper] apfmon messages muted
[2025-06-05 14:56:20] 2025-06-05 12:54:58,322 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:56:20] 2025-06-05 12:54:58,325 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:56:20]  *** Error codes and diagnostics ***
[2025-06-05 14:56:20]     "exeErrorCode": 0,
[2025-06-05 14:56:20]     "exeErrorDiag": "",
[2025-06-05 14:56:20]     "pilotErrorCode": 0,
[2025-06-05 14:56:20]     "pilotErrorDiag": "",
[2025-06-05 14:56:20]  *** Listing of results directory ***
[2025-06-05 14:56:20] total 393236
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-05 14:56:20] -rwx------ 1 boinc boinc     37140 Jun  3 21:50 runpilot2-wrapper.sh
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:50 queuedata.json
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc       100 Jun  5 12:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:56:20] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 12:32 run_atlas
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc       105 Jun  5 12:32 job.xml
[2025-06-05 14:56:20] -rw-r--r-- 2 boinc boinc 216314044 Jun  5 12:32 EVNT.45006593._001764.pool.root.1
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc      6687 Jun  5 12:32 init_data.xml
[2025-06-05 14:56:20] -rw-r--r-- 2 boinc boinc     15093 Jun  5 12:32 start_atlas.sh
[2025-06-05 14:56:20] drwxrwx--x 2 boinc boinc      4096 Jun  5 12:32 shared
[2025-06-05 14:56:20] -rw-r--r-- 2 boinc boinc    508880 Jun  5 12:32 input.tar.gz
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc         0 Jun  5 12:32 boinc_lockfile
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc      2524 Jun  5 12:32 pandaJob.out
[2025-06-05 14:56:20] -rw------- 1 boinc boinc    982836 Jun  5 12:33 agis_schedconf.cvmfs.json
[2025-06-05 14:56:20] -rw------- 1 boinc boinc   1598969 Jun  5 12:33 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:56:20] drwx------ 4 boinc boinc      4096 Jun  5 12:33 pilot3
[2025-06-05 14:56:20] -rw------- 1 boinc boinc        95 Jun  5 14:53 pilot_heartbeat.json
[2025-06-05 14:56:20] -rw------- 1 boinc boinc 180390115 Jun  5 14:53 HITS.45006595._044002.pool.root.1
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc       530 Jun  5 14:54 boinc_task_state.xml
[2025-06-05 14:56:20] -rw------- 1 boinc boinc      1028 Jun  5 14:54 memory_monitor_summary.json
[2025-06-05 14:56:20] -rw------- 1 boinc boinc    270541 Jun  5 14:54 log.45006595._044002.job.log.tgz.1
[2025-06-05 14:56:20] -rw------- 1 boinc boinc      7697 Jun  5 14:54 heartbeat.json
[2025-06-05 14:56:20] -rw------- 1 boinc boinc      4437 Jun  5 14:54 pilotlog.txt
[2025-06-05 14:56:20] -rw------- 1 boinc boinc    799182 Jun  5 14:54 log.45006595._044002.job.log.1
[2025-06-05 14:56:20] -rw------- 1 boinc boinc       357 Jun  5 14:54 output.list
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc       620 Jun  5 14:54 runtime_log
[2025-06-05 14:56:20] -rw------- 1 boinc boinc   1085440 Jun  5 14:54 result.tar.gz
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc      9040 Jun  5 14:54 runtime_log.err
[2025-06-05 14:56:20] -rw------- 1 boinc boinc       662 Jun  5 14:54 6EoKDm5pmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzvlKDmWgDaYm.diag
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc        27 Jun  5 14:56 wrapper_checkpoint.txt
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc      8192 Jun  5 14:56 boinc_mmap_file
[2025-06-05 14:56:20] -rw-r--r-- 1 boinc boinc     20872 Jun  5 14:56 stderr.txt
[2025-06-05 14:56:20] HITS file was successfully produced:
[2025-06-05 14:56:20] -rw------- 1 boinc boinc 180390115 Jun  5 14:53 shared/HITS.pool.root.1
[2025-06-05 14:56:20]  *** Contents of shared directory: ***
[2025-06-05 14:56:20] total 388996
[2025-06-05 14:56:20] -rw-r--r-- 2 boinc boinc 216314044 Jun  5 12:32 ATLAS.root_0
[2025-06-05 14:56:20] -rw-r--r-- 2 boinc boinc     15093 Jun  5 12:32 start_atlas.sh
[2025-06-05 14:56:20] -rw-r--r-- 2 boinc boinc    508880 Jun  5 12:32 input.tar.gz
[2025-06-05 14:56:20] -rw------- 1 boinc boinc 180390115 Jun  5 14:53 HITS.pool.root.1
[2025-06-05 14:56:20] -rw------- 1 boinc boinc   1085440 Jun  5 14:54 result.tar.gz
14:56:21 (3254116): run_atlas exited; CPU time 32451.608650
14:56:21 (3254116): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN