Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:40:07 (3956772): wrapper (7.7.26015): starting
17:40:07 (3956772): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 17:40:07] Arguments: --nthreads 4
[2025-06-05 17:40:07] Threads: 4
[2025-06-05 17:40:07] Checking for CVMFS
[2025-06-05 17:40:07] No cvmfs_config command found, will try listing directly
[2025-06-05 17:40:07] CVMFS is ok
[2025-06-05 17:40:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 17:40:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 17:40:07] Further information can be found at the LHC@home message board.
[2025-06-05 17:40:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:40:07] Checking for apptainer binary...
[2025-06-05 17:40:07] which: no apptainer in ((null))
[2025-06-05 17:40:07] apptainer is not installed, using version from CVMFS
[2025-06-05 17:40:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:40:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-05 17:40:07] apptainer works
[2025-06-05 17:40:07] Set ATHENA_PROC_NUMBER=4
[2025-06-05 17:40:07] Set ATHENA_CORE_NUMBER=4
[2025-06-05 17:40:07] Starting ATLAS job with PandaID=6678070868
[2025-06-05 17:40:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 19:57:17]  *** The last 200 lines of the pilot log: ***
[2025-06-05 19:57:17] 2025-06-05 17:56:57,784 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6678070868/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 19:57:17] 2025-06-05 17:56:59,309 | INFO     | PID=3960697 has CPU usage=25.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 19:57:17] 2025-06-05 17:56:59,310 | INFO     | .. there are 13 such processes running
[2025-06-05 19:57:17] 2025-06-05 17:56:59,422 | INFO     | number of running child processes to parent process 3968110: 1
[2025-06-05 19:57:17] 2025-06-05 17:56:59,423 | INFO     | maximum number of monitored processes: 6
[2025-06-05 19:57:17] 2025-06-05 17:57:01,925 | INFO     | monitor loop #570: job 0:6678070868 is in state 'finished'
[2025-06-05 19:57:17] 2025-06-05 17:57:01,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:57:17] 2025-06-05 17:57:03,465 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 19:57:17] 2025-06-05 17:57:03,465 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6678070868/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 19:57:17] 2025-06-05 17:57:03,466 | INFO     | extracted standard info from prmon json
[2025-06-05 19:57:17] 2025-06-05 17:57:03,466 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 19:57:17] 2025-06-05 17:57:03,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 19:57:17] 2025-06-05 17:57:03,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 19:57:17] 2025-06-05 17:57:03,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 19:57:17] 2025-06-05 17:57:03,469 | INFO     | fitting pss+swap vs Time
[2025-06-05 19:57:17] 2025-06-05 17:57:03,469 | INFO     | sum of square deviations: 746051197.5
[2025-06-05 19:57:17] 2025-06-05 17:57:03,470 | INFO     | sum of deviations: 12134129180.499989
[2025-06-05 19:57:17] 2025-06-05 17:57:03,470 | INFO     | mean x: 1749142111.5
[2025-06-05 19:57:17] 2025-06-05 17:57:03,470 | INFO     | mean y: 2313887.5597014925
[2025-06-05 19:57:17] 2025-06-05 17:57:03,470 | INFO     | -- intersect: -28446559872.197937
[2025-06-05 19:57:17] 2025-06-05 17:57:03,471 | INFO     | intersect: -28446559872.197937
[2025-06-05 19:57:17] 2025-06-05 17:57:03,471 | INFO     | chi2: 1.7515161607602048
[2025-06-05 19:57:17] 2025-06-05 17:57:03,471 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,472 | INFO     | sum of deviations: 11812833854.000002
[2025-06-05 19:57:17] 2025-06-05 17:57:03,472 | INFO     | mean x: 1749141959.0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,472 | INFO     | mean y: 2313278.1627906975
[2025-06-05 19:57:17] 2025-06-05 17:57:03,472 | INFO     | -- intersect: -31040258743.213795
[2025-06-05 19:57:17] 2025-06-05 17:57:03,472 | INFO     | intersect: -31040258743.213795
[2025-06-05 19:57:17] 2025-06-05 17:57:03,472 | INFO     | chi2: 1.7544448767811789
[2025-06-05 19:57:17] 2025-06-05 17:57:03,472 | INFO     | current chi2=1.7544448767811789 (change=-0.16721033391453086 %)
[2025-06-05 19:57:17] 2025-06-05 17:57:03,472 | INFO     | right removable region: 128
[2025-06-05 19:57:17] 2025-06-05 17:57:03,473 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,473 | INFO     | sum of deviations: -9507630555.999998
[2025-06-05 19:57:17] 2025-06-05 17:57:03,473 | INFO     | mean x: 1749142264.0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,474 | INFO     | mean y: 2354299.2248062016
[2025-06-05 19:57:17] 2025-06-05 17:57:03,474 | INFO     | -- intersect: 24987159926.66349
[2025-06-05 19:57:17] 2025-06-05 17:57:03,474 | INFO     | intersect: 24987159926.66349
[2025-06-05 19:57:17] 2025-06-05 17:57:03,474 | INFO     | chi2: 0.027442580155617995
[2025-06-05 19:57:17] 2025-06-05 17:57:03,474 | INFO     | current chi2=0.027442580155617995 (change=98.43320999426535 %)
[2025-06-05 19:57:17] 2025-06-05 17:57:03,474 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,475 | INFO     | sum of deviations: -8963800580.5
[2025-06-05 19:57:17] 2025-06-05 17:57:03,475 | INFO     | mean x: 1749142416.5
[2025-06-05 19:57:17] 2025-06-05 17:57:03,475 | INFO     | mean y: 2353138.169354839
[2025-06-05 19:57:17] 2025-06-05 17:57:03,475 | INFO     | -- intersect: 26524099905.8185
[2025-06-05 19:57:17] 2025-06-05 17:57:03,475 | INFO     | intersect: 26524099905.8185
[2025-06-05 19:57:17] 2025-06-05 17:57:03,475 | INFO     | chi2: 0.023786899696552233
[2025-06-05 19:57:17] 2025-06-05 17:57:03,476 | INFO     | current chi2=0.023786899696552233 (change=13.321198073707286 %)
[2025-06-05 19:57:17] 2025-06-05 17:57:03,476 | INFO     | left removable region: 20
[2025-06-05 19:57:17] 2025-06-05 17:57:03,476 | INFO     | sum of square deviations: 390582207.0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,476 | INFO     | sum of deviations: -4262045722.0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,476 | INFO     | mean x: 1749142538.5
[2025-06-05 19:57:17] 2025-06-05 17:57:03,477 | INFO     | mean y: 2343593.925925926
[2025-06-05 19:57:17] 2025-06-05 17:57:03,477 | INFO     | -- intersect: 19089043755.313835
[2025-06-05 19:57:17] 2025-06-05 17:57:03,477 | INFO     | intersect: 19089043755.313835
[2025-06-05 19:57:17] 2025-06-05 17:57:03,477 | INFO     | chi2: 0.013096783075851772
[2025-06-05 19:57:17] 2025-06-05 17:57:03,477 | INFO     | -- intersect: 19089043755.313835
[2025-06-05 19:57:17] 2025-06-05 17:57:03,477 | INFO     | current memory leak: -10.91 B/s (using 108 data points, chi2=0.01)
[2025-06-05 19:57:17] 2025-06-05 17:57:03,478 | INFO     | ..............................
[2025-06-05 19:57:17] 2025-06-05 17:57:03,478 | INFO     | . Timing measurements:
[2025-06-05 19:57:17] 2025-06-05 17:57:03,478 | INFO     | . get job = 0 s
[2025-06-05 19:57:17] 2025-06-05 17:57:03,478 | INFO     | . initial setup = 1 s
[2025-06-05 19:57:17] 2025-06-05 17:57:03,478 | INFO     | . payload setup = 9 s
[2025-06-05 19:57:17] 2025-06-05 17:57:03,478 | INFO     | . stage-in = 0 s
[2025-06-05 19:57:17] 2025-06-05 17:57:03,478 | INFO     | . payload execution = 8163 s
[2025-06-05 19:57:17] 2025-06-05 17:57:03,478 | INFO     | . stage-out = 1 s
[2025-06-05 19:57:17] 2025-06-05 17:57:03,479 | INFO     | . log creation = 0 s
[2025-06-05 19:57:17] 2025-06-05 17:57:03,479 | INFO     | ..............................
[2025-06-05 19:57:17] 2025-06-05 17:57:03,574 | INFO     | 
[2025-06-05 19:57:17] 2025-06-05 17:57:03,575 | INFO     | job summary report
[2025-06-05 19:57:17] 2025-06-05 17:57:03,575 | INFO     | --------------------------------------------------
[2025-06-05 19:57:17] 2025-06-05 17:57:03,575 | INFO     | PanDA job id: 6678070868
[2025-06-05 19:57:17] 2025-06-05 17:57:03,575 | INFO     | task id: 45006595
[2025-06-05 19:57:17] 2025-06-05 17:57:03,575 | INFO     | errors: (none)
[2025-06-05 19:57:17] 2025-06-05 17:57:03,575 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 19:57:17] 2025-06-05 17:57:03,575 | INFO     | pilot state: finished 
[2025-06-05 19:57:17] 2025-06-05 17:57:03,575 | INFO     | transexitcode: 0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | exeerrorcode: 0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | exeerrordiag: 
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | exitcode: 0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | exitmsg: OK
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | cpuconsumptiontime: 30907 s
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | nevents: 400
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | neventsw: 0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | pid: 3968110
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | pgrp: 3968110
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | corecount: 4
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | event service: False
[2025-06-05 19:57:17] 2025-06-05 17:57:03,576 | INFO     | sizes: {0: 2397132, 1: 2397331, 7: 2397537, 11: 2397565, 8176: 2425580, 8178: 2434729, 8185: 2434843}
[2025-06-05 19:57:17] 2025-06-05 17:57:03,577 | INFO     | --------------------------------------------------
[2025-06-05 19:57:17] 2025-06-05 17:57:03,577 | INFO     | 
[2025-06-05 19:57:17] 2025-06-05 17:57:03,577 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-06-05 19:57:17] 2025-06-05 17:57:03,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 19:57:17] 2025-06-05 17:57:03,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 19:57:17] 2025-06-05 17:57:03,610 | INFO     | job 6678070868 has completed (purged errors)
[2025-06-05 19:57:17] 2025-06-05 17:57:03,610 | INFO     | overall cleanup function is called
[2025-06-05 19:57:17] 2025-06-05 17:57:04,619 | INFO     | --- collectZombieJob: --- 10, [3968110]
[2025-06-05 19:57:17] 2025-06-05 17:57:04,619 | INFO     | zombie collector waiting for pid 3968110
[2025-06-05 19:57:17] 2025-06-05 17:57:04,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 19:57:17] 2025-06-05 17:57:04,620 | INFO     | collected zombie processes
[2025-06-05 19:57:17] 2025-06-05 17:57:04,620 | INFO     | will attempt to kill all subprocesses of pid=3968110
[2025-06-05 19:57:17] 2025-06-05 17:57:05,264 | INFO     | process IDs to be killed: [3968110] (in reverse order)
[2025-06-05 19:57:17] 2025-06-05 17:57:05,507 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 19:57:17] 2025-06-05 17:57:05,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 19:57:17] 2025-06-05 17:57:05,534 | INFO     | did not find any defunct processes belonging to 3968110
[2025-06-05 19:57:17] 2025-06-05 17:57:05,555 | INFO     | did not find any defunct processes belonging to 3968110
[2025-06-05 19:57:17] 2025-06-05 17:57:05,556 | INFO     | ready for new job
[2025-06-05 19:57:17] 2025-06-05 17:57:05,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 19:57:17] 2025-06-05 17:57:05,558 | INFO     | **************************************
[2025-06-05 19:57:17] 2025-06-05 17:57:05,558 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 19:57:17] 2025-06-05 17:57:05,558 | INFO     | **************************************
[2025-06-05 19:57:17] 2025-06-05 17:57:05,558 | INFO     | 
[2025-06-05 19:57:17] 2025-06-05 17:57:05,566 | INFO     | architecture information:
[2025-06-05 19:57:17] 2025-06-05 17:57:05,566 | INFO     | executing command: cat /etc/os-release
[2025-06-05 19:57:17] 2025-06-05 17:57:05,590 | INFO     | cat /etc/os-release:
[2025-06-05 19:57:17] NAME="CentOS Linux"
[2025-06-05 19:57:17] VERSION="7 (Core)"
[2025-06-05 19:57:17] ID="centos"
[2025-06-05 19:57:17] ID_LIKE="rhel fedora"
[2025-06-05 19:57:17] VERSION_ID="7"
[2025-06-05 19:57:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 19:57:17] ANSI_COLOR="0;31"
[2025-06-05 19:57:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 19:57:17] HOME_URL="https://www.centos.org/"
[2025-06-05 19:57:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 19:57:17] 
[2025-06-05 19:57:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 19:57:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 19:57:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 19:57:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 19:57:17] 
[2025-06-05 19:57:17] 2025-06-05 17:57:05,590 | INFO     | **************************************
[2025-06-05 19:57:17] 2025-06-05 17:57:06,094 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-06-05 19:57:17] 2025-06-05 17:57:06,115 | INFO     | sufficient remaining disk space (3289610452992 B)
[2025-06-05 19:57:17] 2025-06-05 17:57:06,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 19:57:17] 2025-06-05 17:57:06,115 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 19:57:17] 2025-06-05 17:57:06,116 | INFO     | update_server=False
[2025-06-05 19:57:17] 2025-06-05 17:57:06,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 19:57:17] 2025-06-05 17:57:06,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:57:17] 2025-06-05 17:57:06,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 19:57:17] 2025-06-05 17:57:06,117 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 19:57:17] 2025-06-05 17:57:06,117 | INFO     | aborting loop
[2025-06-05 19:57:17] 2025-06-05 17:57:06,118 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 19:57:17] 2025-06-05 17:57:06,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 19:57:17] 2025-06-05 17:57:06,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 19:57:17] 2025-06-05 17:57:06,329 | INFO     | all payload control threads have been joined
[2025-06-05 19:57:17] 2025-06-05 17:57:06,877 | INFO     | all data control threads have been joined
[2025-06-05 19:57:17] 2025-06-05 17:57:07,120 | INFO     | [job] retrieve thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:07,122 | INFO     | [job] job monitor thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:07,251 | INFO     | all job control threads have been joined
[2025-06-05 19:57:17] 2025-06-05 17:57:07,276 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:07,335 | INFO     | [payload] control thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:07,487 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:07,537 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:07,728 | INFO     | [payload] failed_post thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:07,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 19:57:17] 2025-06-05 17:57:07,878 | INFO     | [data] control thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:07,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:07,933 | INFO     | [data] copytool_in thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:08,122 | INFO     | [data] copytool_out thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:08,256 | INFO     | [job] control thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:08,443 | INFO     | [job] validate thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:08,466 | INFO     | [payload] validate_post thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:08,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:57:17] 2025-06-05 17:57:09,590 | INFO     | [job] queue monitor thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:11,740 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 19:57:17] 2025-06-05 17:57:11,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23009900676928)>', '<ExcThread(monitor, started 23009651795712)>']
[2025-06-05 19:57:17] 2025-06-05 17:57:12,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 19:57:17] 2025-06-05 17:57:12,148 | INFO     | [monitor] control thread has ended
[2025-06-05 19:57:17] 2025-06-05 17:57:16,794 | INFO     | all workflow threads have been joined
[2025-06-05 19:57:17] 2025-06-05 17:57:16,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 19:57:17] 2025-06-05 17:57:16,795 | INFO     | traces error code: 0
[2025-06-05 19:57:17] 2025-06-05 17:57:16,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 19:57:17] 2025-06-05 17:57:16,942 [wrapper] ==== pilot stdout END ====
[2025-06-05 19:57:17] 2025-06-05 17:57:16,946 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 19:57:17] 2025-06-05 17:57:16,949 [wrapper] pilotpid: 3960697
[2025-06-05 19:57:17] 2025-06-05 17:57:16,953 [wrapper] Pilot exit status: 0
[2025-06-05 19:57:17] 2025-06-05 17:57:16,967 [wrapper] pandaids: 6678070868
[2025-06-05 19:57:17] 2025-06-05 17:57:17,113 [wrapper] cleanup supervisor_pilot  290094 3960698
[2025-06-05 19:57:17] 2025-06-05 17:57:17,117 [wrapper] Test setup, not cleaning
[2025-06-05 19:57:17] 2025-06-05 17:57:17,121 [wrapper] apfmon messages muted
[2025-06-05 19:57:17] 2025-06-05 17:57:17,124 [wrapper] ==== wrapper stdout END ====
[2025-06-05 19:57:17] 2025-06-05 17:57:17,128 [wrapper] ==== wrapper stderr END ====
[2025-06-05 19:57:17]  *** Error codes and diagnostics ***
[2025-06-05 19:57:17]     "exeErrorCode": 0,
[2025-06-05 19:57:17]     "exeErrorDiag": "",
[2025-06-05 19:57:17]     "pilotErrorCode": 0,
[2025-06-05 19:57:17]     "pilotErrorDiag": "",
[2025-06-05 19:57:17]  *** Listing of results directory ***
[2025-06-05 19:57:17] total 386660
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:09 pilot3.tar.gz
[2025-06-05 19:57:17] -rwx------ 1 boinc boinc     37140 Jun  3 22:15 runpilot2-wrapper.sh
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:15 queuedata.json
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc       100 Jun  5 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 19:57:17] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 17:40 run_atlas
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc       105 Jun  5 17:40 job.xml
[2025-06-05 19:57:17] -rw-r--r-- 2 boinc boinc 212968513 Jun  5 17:40 EVNT.45006593._001794.pool.root.1
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc      6687 Jun  5 17:40 init_data.xml
[2025-06-05 19:57:17] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:40 start_atlas.sh
[2025-06-05 19:57:17] drwxrwx--x 2 boinc boinc      4096 Jun  5 17:40 shared
[2025-06-05 19:57:17] -rw-r--r-- 2 boinc boinc    508872 Jun  5 17:40 input.tar.gz
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc         0 Jun  5 17:40 boinc_lockfile
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc      2524 Jun  5 17:40 pandaJob.out
[2025-06-05 19:57:17] -rw------- 1 boinc boinc    983229 Jun  5 17:40 agis_schedconf.cvmfs.json
[2025-06-05 19:57:17] -rw------- 1 boinc boinc   1598969 Jun  5 17:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 19:57:17] drwx------ 4 boinc boinc      4096 Jun  5 17:40 pilot3
[2025-06-05 19:57:17] -rw------- 1 boinc boinc 177043643 Jun  5 19:56 HITS.45006595._044743.pool.root.1
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc       530 Jun  5 19:56 boinc_task_state.xml
[2025-06-05 19:57:17] -rw------- 1 boinc boinc      1030 Jun  5 19:56 memory_monitor_summary.json
[2025-06-05 19:57:17] -rw------- 1 boinc boinc    272523 Jun  5 19:56 log.45006595._044743.job.log.tgz.1
[2025-06-05 19:57:17] -rw------- 1 boinc boinc        95 Jun  5 19:56 pilot_heartbeat.json
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc      8192 Jun  5 19:57 boinc_mmap_file
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc        27 Jun  5 19:57 wrapper_checkpoint.txt
[2025-06-05 19:57:17] -rw------- 1 boinc boinc      7699 Jun  5 19:57 heartbeat.json
[2025-06-05 19:57:17] -rw------- 1 boinc boinc      4488 Jun  5 19:57 pilotlog.txt
[2025-06-05 19:57:17] -rw------- 1 boinc boinc    774622 Jun  5 19:57 log.45006595._044743.job.log.1
[2025-06-05 19:57:17] -rw------- 1 boinc boinc       357 Jun  5 19:57 output.list
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc       620 Jun  5 19:57 runtime_log
[2025-06-05 19:57:17] -rw------- 1 boinc boinc   1064960 Jun  5 19:57 result.tar.gz
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc      9040 Jun  5 19:57 runtime_log.err
[2025-06-05 19:57:17] -rw------- 1 boinc boinc       662 Jun  5 19:57 Du4KDm4Dng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmorZKDmKoB07n.diag
[2025-06-05 19:57:17] -rw-r--r-- 1 boinc boinc     20975 Jun  5 19:57 stderr.txt
[2025-06-05 19:57:17] HITS file was successfully produced:
[2025-06-05 19:57:17] -rw------- 1 boinc boinc 177043643 Jun  5 19:56 shared/HITS.pool.root.1
[2025-06-05 19:57:17]  *** Contents of shared directory: ***
[2025-06-05 19:57:17] total 382440
[2025-06-05 19:57:17] -rw-r--r-- 2 boinc boinc 212968513 Jun  5 17:40 ATLAS.root_0
[2025-06-05 19:57:17] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:40 start_atlas.sh
[2025-06-05 19:57:17] -rw-r--r-- 2 boinc boinc    508872 Jun  5 17:40 input.tar.gz
[2025-06-05 19:57:17] -rw------- 1 boinc boinc 177043643 Jun  5 19:56 HITS.pool.root.1
[2025-06-05 19:57:17] -rw------- 1 boinc boinc   1064960 Jun  5 19:57 result.tar.gz
19:57:19 (3956772): run_atlas exited; CPU time 31374.692627
19:57:19 (3956772): called boinc_finish(0)

</stderr_txt>
]]>

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