Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:09:32 (30564): wrapper (7.7.26015): starting
20:09:32 (30564): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 20:09:32] Arguments: --nthreads 12
[2025-06-03 20:09:32] Threads: 12
[2025-06-03 20:09:32] Checking for CVMFS
[2025-06-03 20:09:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:09:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:09:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:09:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:09:32] 2.11.2.0 2979 34957 85120 146761 0 56 18633775 20275201 1 130560 0 15043722 99.982 6241730 7425 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 20:09:32] CVMFS is ok
[2025-06-03 20:09:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:09:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:09:32] Further information can be found at the LHC@home message board.
[2025-06-03 20:09:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:09:32] Checking for apptainer binary...
[2025-06-03 20:09:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:09:32] Running /usr/bin/apptainer --version
[2025-06-03 20:09:32] apptainer version 1.3.2-1.el7
[2025-06-03 20:09:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:09:34] c-205-21.aglt2.org
[2025-06-03 20:09:34] apptainer works
[2025-06-03 20:09:34] Set ATHENA_PROC_NUMBER=12
[2025-06-03 20:09:34] Set ATHENA_CORE_NUMBER=12
[2025-06-03 20:09:34] Starting ATLAS job with PandaID=6666850886
[2025-06-03 20:09:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:46:37]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:46:37]  mtime=0
[2025-06-03 21:46:37]  protocol_id=None
[2025-06-03 21:46:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 21:46:37]  replicas=None
[2025-06-03 21:46:37]  scope=mc23_13p6TeV
[2025-06-03 21:46:37]  status=None
[2025-06-03 21:46:37]  status_code=0
[2025-06-03 21:46:37]  storage_token=
[2025-06-03 21:46:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666850886/log.44871837._064947.job.log.tgz.1
[2025-06-03 21:46:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/5d/log.44871837._064947.job.log.tgz.1
[2025-06-03 21:46:37]  workdir=None
[2025-06-03 21:46:37] ]
[2025-06-03 21:46:37] 2025-06-04 01:46:11,700 | INFO     | transferring file log.44871837._064947.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666850886/log.44871837._064947.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:46:37] 2025-06-04 01:46:11,700 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666850886/log.44871837._064947.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._064947.job
[2025-06-03 21:46:37] 2025-06-04 01:46:11,724 | INFO     | adding to output.list: log.44871837._064947.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/5d/log.44871837._064947.job.log.tg
[2025-06-03 21:46:37] 2025-06-04 01:46:11,725 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:46:37] 2025-06-04 01:46:11,725 | INFO     | summary of transferred files:
[2025-06-03 21:46:37] 2025-06-04 01:46:11,725 | INFO     |  -- lfn=log.44871837._064947.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:46:37] 2025-06-04 01:46:11,726 | INFO     | stage-out finished correctly
[2025-06-03 21:46:37] 2025-06-04 01:46:11,818 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:46:37] 2025-06-04 01:46:12,030 | WARNING  | process 10059 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 21:46:37] 2025-06-04 01:46:12,030 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666850886/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:46:37] 2025-06-04 01:46:12,122 | INFO     | number of running child processes to parent process 10059: 1
[2025-06-03 21:46:37] 2025-06-04 01:46:12,122 | INFO     | maximum number of monitored processes: 6
[2025-06-03 21:46:37] 2025-06-04 01:46:13,187 | INFO     | job 6666850886 has state=finished
[2025-06-03 21:46:37] 2025-06-04 01:46:13,187 | INFO     | preparing for final server update for job 6666850886 in state='finished'
[2025-06-03 21:46:37] 2025-06-04 01:46:13,188 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:46:37] 2025-06-04 01:46:13,188 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:46:37] 2025-06-04 01:46:13,188 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:46:37] 2025-06-04 01:46:13,188 | INFO     | job 6666850886 has finished - writing final server update
[2025-06-03 21:46:37] 2025-06-04 01:46:13,189 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:46:37] 2025-06-04 01:46:13,190 | INFO     | executing command: lscpu
[2025-06-03 21:46:37] 2025-06-04 01:46:13,218 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:46:37] 2025-06-04 01:46:14,625 | INFO     | monitor loop #431: job 0:6666850886 is in state 'finished'
[2025-06-03 21:46:37] 2025-06-04 01:46:14,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:46:37] 2025-06-04 01:46:17,127 | INFO     | monitor loop #432: job 0:6666850886 is in state 'finished'
[2025-06-03 21:46:37] 2025-06-04 01:46:17,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:46:37] 2025-06-04 01:46:17,698 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 21:46:37] 2025-06-04 01:46:17,699 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666850886/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:46:37] 2025-06-04 01:46:17,700 | INFO     | extracted standard info from prmon json
[2025-06-03 21:46:37] 2025-06-04 01:46:17,700 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:46:37] 2025-06-04 01:46:17,700 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:46:37] 2025-06-04 01:46:17,701 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:46:37] 2025-06-04 01:46:17,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:46:37] 2025-06-04 01:46:17,703 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:46:37] 2025-06-04 01:46:17,703 | INFO     | sum of square deviations: 211285822.0
[2025-06-03 21:46:37] 2025-06-04 01:46:17,703 | INFO     | sum of deviations: 360173798.50000006
[2025-06-03 21:46:37] 2025-06-04 01:46:17,704 | INFO     | mean x: 1748998776.5
[2025-06-03 21:46:37] 2025-06-04 01:46:17,704 | INFO     | mean y: 2680258.0568181816
[2025-06-03 21:46:37] 2025-06-04 01:46:17,704 | INFO     | -- intersect: -2978795389.2010355
[2025-06-03 21:46:37] 2025-06-04 01:46:17,704 | INFO     | intersect: -2978795389.2010355
[2025-06-03 21:46:37] 2025-06-04 01:46:17,704 | INFO     | chi2: 0.02909369895309233
[2025-06-03 21:46:37] 2025-06-04 01:46:17,704 | INFO     | -- intersect: -2978795389.2010355
[2025-06-03 21:46:37] 2025-06-04 01:46:17,704 | INFO     | current memory leak: 1.70 B/s (using 88 data points, chi2=0.03)
[2025-06-03 21:46:37] 2025-06-04 01:46:17,705 | INFO     | ..............................
[2025-06-03 21:46:37] 2025-06-04 01:46:17,705 | INFO     | . Timing measurements:
[2025-06-03 21:46:37] 2025-06-04 01:46:17,705 | INFO     | . get job = 0 s
[2025-06-03 21:46:37] 2025-06-04 01:46:17,705 | INFO     | . initial setup = 2 s
[2025-06-03 21:46:37] 2025-06-04 01:46:17,705 | INFO     | . payload setup = 9 s
[2025-06-03 21:46:37] 2025-06-04 01:46:17,705 | INFO     | . stage-in = 0 s
[2025-06-03 21:46:37] 2025-06-04 01:46:17,705 | INFO     | . payload execution = 5754 s
[2025-06-03 21:46:37] 2025-06-04 01:46:17,705 | INFO     | . stage-out = 0 s
[2025-06-03 21:46:37] 2025-06-04 01:46:17,706 | INFO     | . log creation = 0 s
[2025-06-03 21:46:37] 2025-06-04 01:46:17,706 | INFO     | ..............................
[2025-06-03 21:46:37] 2025-06-04 01:46:17,788 | INFO     | 
[2025-06-03 21:46:37] 2025-06-04 01:46:17,788 | INFO     | job summary report
[2025-06-03 21:46:37] 2025-06-04 01:46:17,788 | INFO     | --------------------------------------------------
[2025-06-03 21:46:37] 2025-06-04 01:46:17,789 | INFO     | PanDA job id: 6666850886
[2025-06-03 21:46:37] 2025-06-04 01:46:17,789 | INFO     | task id: 44871837
[2025-06-03 21:46:37] 2025-06-04 01:46:17,789 | INFO     | errors: (none)
[2025-06-03 21:46:37] 2025-06-04 01:46:17,789 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:46:37] 2025-06-04 01:46:17,789 | INFO     | pilot state: finished 
[2025-06-03 21:46:37] 2025-06-04 01:46:17,789 | INFO     | transexitcode: 0
[2025-06-03 21:46:37] 2025-06-04 01:46:17,790 | INFO     | exeerrorcode: 0
[2025-06-03 21:46:37] 2025-06-04 01:46:17,790 | INFO     | exeerrordiag: 
[2025-06-03 21:46:37] 2025-06-04 01:46:17,790 | INFO     | exitcode: 0
[2025-06-03 21:46:37] 2025-06-04 01:46:17,790 | INFO     | exitmsg: OK
[2025-06-03 21:46:37] 2025-06-04 01:46:17,790 | INFO     | cpuconsumptiontime: 62915 s
[2025-06-03 21:46:37] 2025-06-04 01:46:17,790 | INFO     | nevents: 400
[2025-06-03 21:46:37] 2025-06-04 01:46:17,790 | INFO     | neventsw: 0
[2025-06-03 21:46:37] 2025-06-04 01:46:17,791 | INFO     | pid: 10059
[2025-06-03 21:46:37] 2025-06-04 01:46:17,791 | INFO     | pgrp: 10059
[2025-06-03 21:46:37] 2025-06-04 01:46:17,791 | INFO     | corecount: 12
[2025-06-03 21:46:37] 2025-06-04 01:46:17,791 | INFO     | event service: False
[2025-06-03 21:46:37] 2025-06-04 01:46:17,791 | INFO     | sizes: {0: 2405004, 1: 2405259, 6: 2405465, 12: 2405493, 5768: 2431992, 5769: 2441117, 5775: 2441231}
[2025-06-03 21:46:37] 2025-06-04 01:46:17,791 | INFO     | --------------------------------------------------
[2025-06-03 21:46:37] 2025-06-04 01:46:17,792 | INFO     | 
[2025-06-03 21:46:37] 2025-06-04 01:46:17,792 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 21:46:37] 2025-06-04 01:46:17,816 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,819 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:46:37] 2025-06-04 01:46:17,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,819 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:46:37] 2025-06-04 01:46:17,820 | INFO     | job 6666850886 has completed (purged errors)
[2025-06-03 21:46:37] 2025-06-04 01:46:17,820 | INFO     | overall cleanup function is called
[2025-06-03 21:46:37] 2025-06-04 01:46:18,827 | INFO     | --- collectZombieJob: --- 10, [10059]
[2025-06-03 21:46:37] 2025-06-04 01:46:18,827 | INFO     | zombie collector waiting for pid 10059
[2025-06-03 21:46:37] 2025-06-04 01:46:18,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:46:37] 2025-06-04 01:46:18,828 | INFO     | collected zombie processes
[2025-06-03 21:46:37] 2025-06-04 01:46:18,828 | INFO     | will attempt to kill all subprocesses of pid=10059
[2025-06-03 21:46:37] 2025-06-04 01:46:18,919 | INFO     | process IDs to be killed: [10059] (in reverse order)
[2025-06-03 21:46:37] 2025-06-04 01:46:18,970 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:46:37] 2025-06-04 01:46:18,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:46:37] 2025-06-04 01:46:18,974 | INFO     | did not find any defunct processes belonging to 10059
[2025-06-03 21:46:37] 2025-06-04 01:46:18,978 | INFO     | did not find any defunct processes belonging to 10059
[2025-06-03 21:46:37] 2025-06-04 01:46:18,978 | INFO     | ready for new job
[2025-06-03 21:46:37] 2025-06-04 01:46:18,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:46:37] 2025-06-04 01:46:18,980 | INFO     | **************************************
[2025-06-03 21:46:37] 2025-06-04 01:46:18,981 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:46:37] 2025-06-04 01:46:18,981 | INFO     | **************************************
[2025-06-03 21:46:37] 2025-06-04 01:46:18,981 | INFO     | 
[2025-06-03 21:46:37] 2025-06-04 01:46:18,981 | INFO     | architecture information:
[2025-06-03 21:46:37] 2025-06-04 01:46:18,982 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:46:37] 2025-06-04 01:46:18,998 | INFO     | cat /etc/os-release:
[2025-06-03 21:46:37] NAME="CentOS Linux"
[2025-06-03 21:46:37] VERSION="7 (Core)"
[2025-06-03 21:46:37] ID="centos"
[2025-06-03 21:46:37] ID_LIKE="rhel fedora"
[2025-06-03 21:46:37] VERSION_ID="7"
[2025-06-03 21:46:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:46:37] ANSI_COLOR="0;31"
[2025-06-03 21:46:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:46:37] HOME_URL="https://www.centos.org/"
[2025-06-03 21:46:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:46:37] 
[2025-06-03 21:46:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:46:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:46:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:46:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:46:37] 
[2025-06-03 21:46:37] 2025-06-04 01:46:18,999 | INFO     | **************************************
[2025-06-03 21:46:37] 2025-06-04 01:46:19,502 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 21:46:37] 2025-06-04 01:46:19,520 | INFO     | sufficient remaining disk space (29375856640 B)
[2025-06-03 21:46:37] 2025-06-04 01:46:19,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:46:37] 2025-06-04 01:46:19,520 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:46:37] 2025-06-04 01:46:19,521 | INFO     | update_server=False
[2025-06-03 21:46:37] 2025-06-04 01:46:19,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:46:37] 2025-06-04 01:46:19,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:46:37] 2025-06-04 01:46:19,521 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:46:37] 2025-06-04 01:46:19,522 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:46:37] 2025-06-04 01:46:19,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:46:37] 2025-06-04 01:46:19,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:46:37] 2025-06-04 01:46:19,574 | INFO     | all data control threads have been joined
[2025-06-03 21:46:37] 2025-06-04 01:46:19,631 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 21:46:37] 2025-06-04 01:46:19,631 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 21:46:37] 2025-06-04 01:46:19,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:46:37] 2025-06-04 01:46:19,631 | INFO     | will abort loop
[2025-06-03 21:46:37] 2025-06-04 01:46:19,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:46:37] 2025-06-04 01:46:19,983 | INFO     | all payload control threads have been joined
[2025-06-03 21:46:37] 2025-06-04 01:46:20,471 | INFO     | all job control threads have been joined
[2025-06-03 21:46:37] 2025-06-04 01:46:20,526 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:20,527 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:20,575 | INFO     | [data] control thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:20,634 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:20,739 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:20,846 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:20,988 | INFO     | [payload] control thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:21,458 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:21,477 | INFO     | [job] control thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:21,540 | INFO     | [job] validate thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:21,565 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:21,835 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:21,899 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:21,915 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:22,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:46:37] 2025-06-04 01:46:26,426 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:29,877 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:46:37] 2025-06-04 01:46:30,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:46:37] 2025-06-04 01:46:32,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295964600128)>', '<ExcThread(monitor, started 140295207368448)>']
[2025-06-03 21:46:37] 2025-06-04 01:46:33,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:46:37] 2025-06-04 01:46:33,586 | INFO     | [monitor] control thread has ended
[2025-06-03 21:46:37] 2025-06-04 01:46:37,654 | INFO     | all workflow threads have been joined
[2025-06-03 21:46:37] 2025-06-04 01:46:37,655 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:46:37] 2025-06-04 01:46:37,655 | INFO     | traces error code: 0
[2025-06-03 21:46:37] 2025-06-04 01:46:37,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:46:37] 2025-06-04 01:46:37,745 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:46:37] 2025-06-04 01:46:37,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:46:37] 2025-06-04 01:46:37,752 [wrapper] pilotpid: 2334
[2025-06-03 21:46:37] 2025-06-04 01:46:37,756 [wrapper] Pilot exit status: 0
[2025-06-03 21:46:37] 2025-06-04 01:46:37,772 [wrapper] pandaids: 6666850886
[2025-06-03 21:46:37] 2025-06-04 01:46:37,811 [wrapper] cleanup supervisor_pilot 12650 2335
[2025-06-03 21:46:37] 2025-06-04 01:46:37,815 [wrapper] Test setup, not cleaning
[2025-06-03 21:46:37] 2025-06-04 01:46:37,819 [wrapper] apfmon messages muted
[2025-06-03 21:46:37] 2025-06-04 01:46:37,823 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:46:37] 2025-06-04 01:46:37,827 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:46:37]  *** Error codes and diagnostics ***
[2025-06-03 21:46:37]     "exeErrorCode": 0,
[2025-06-03 21:46:37]     "exeErrorDiag": "",
[2025-06-03 21:46:37]     "pilotErrorCode": 0,
[2025-06-03 21:46:37]     "pilotErrorDiag": "",
[2025-06-03 21:46:37]  *** Listing of results directory ***
[2025-06-03 21:46:37] total 421328
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas      5111 May 27 05:03 queuedata.json
[2025-06-03 21:46:37] -rwx------ 1 boincer umatlas     37140 May 27 05:06 runpilot2-wrapper.sh
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas       100 Jun  3 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:46:37] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 20:09 run_atlas
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas       105 Jun  3 20:09 job.xml
[2025-06-03 21:46:37] -rw-r--r-- 2 boincer umatlas 224174806 Jun  3 20:09 EVNT.44871834._002560.pool.root.1
[2025-06-03 21:46:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 20:09 start_atlas.sh
[2025-06-03 21:46:37] drwxrwx--x 2 boincer umatlas      4096 Jun  3 20:09 shared
[2025-06-03 21:46:37] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 20:09 input.tar.gz
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas         0 Jun  3 20:09 boinc_lockfile
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas      2557 Jun  3 20:09 pandaJob.out
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas    986077 Jun  3 20:09 agis_schedconf.cvmfs.json
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas   1603667 Jun  3 20:09 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:46:37] drwx------ 4 boincer umatlas      4096 Jun  3 20:09 pilot3
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas      5866 Jun  3 21:40 init_data.xml
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas 201624342 Jun  3 21:45 HITS.44871837._064947.pool.root.1
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas       529 Jun  3 21:45 boinc_task_state.xml
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas        95 Jun  3 21:46 pilot_heartbeat.json
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas      1049 Jun  3 21:46 memory_monitor_summary.json
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas    362182 Jun  3 21:46 log.44871837._064947.job.log.tgz.1
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas      7746 Jun  3 21:46 heartbeat.json
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 21:46 boinc_mmap_file
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas        27 Jun  3 21:46 wrapper_checkpoint.txt
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas      4734 Jun  3 21:46 pilotlog.txt
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas    540930 Jun  3 21:46 log.44871837._064947.job.log.1
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas       357 Jun  3 21:46 output.list
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas       620 Jun  3 21:46 runtime_log
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas    921600 Jun  3 21:46 result.tar.gz
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 21:46 runtime_log.err
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas       659 Jun  3 21:46 BRIKDmER5d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO0YKDmlz4Bcn.diag
[2025-06-03 21:46:37] -rw-r--r-- 1 boincer umatlas     21606 Jun  3 21:46 stderr.txt
[2025-06-03 21:46:37] HITS file was successfully produced:
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas 201624342 Jun  3 21:45 shared/HITS.pool.root.1
[2025-06-03 21:46:37]  *** Contents of shared directory: ***
[2025-06-03 21:46:37] total 417244
[2025-06-03 21:46:37] -rw-r--r-- 2 boincer umatlas 224174806 Jun  3 20:09 ATLAS.root_0
[2025-06-03 21:46:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 20:09 start_atlas.sh
[2025-06-03 21:46:37] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 20:09 input.tar.gz
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas 201624342 Jun  3 21:45 HITS.pool.root.1
[2025-06-03 21:46:37] -rw------- 1 boincer umatlas    921600 Jun  3 21:46 result.tar.gz
21:46:39 (30564): run_atlas exited; CPU time 62886.961952
21:46:39 (30564): called boinc_finish(0)

</stderr_txt>
]]>

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