Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:02:02 (2059050): wrapper (7.7.26015): starting
20:02:02 (2059050): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 20:02:02] Arguments: --nthreads 10
[2025-06-03 20:02:02] Threads: 10
[2025-06-03 20:02:02] Checking for CVMFS
[2025-06-03 20:02:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:02:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:02:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:02:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:02:03] 2.12.6.0 4839 591 87276 146761 1 66 30335841 32935936 10300 16776704 0 3395411 99.871 1285706 40605 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 20:02:03] CVMFS is ok
[2025-06-03 20:02:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:02:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:02:03] Further information can be found at the LHC@home message board.
[2025-06-03 20:02:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:02:03] Checking for apptainer binary...
[2025-06-03 20:02:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:02:03] Running /usr/bin/apptainer --version
[2025-06-03 20:02:03] apptainer version 1.4.1-1.el9
[2025-06-03 20:02:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:02:03] c-8-14.aglt2.org
[2025-06-03 20:02:03] apptainer works
[2025-06-03 20:02:03] Set ATHENA_PROC_NUMBER=10
[2025-06-03 20:02:03] Set ATHENA_CORE_NUMBER=10
[2025-06-03 20:02:03] Starting ATLAS job with PandaID=6677920664
[2025-06-03 20:02:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:17:39]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:17:39]  filetype=log
[2025-06-03 21:17:39]  guid=1672e495-623e-41f8-a310-2b234042641e
[2025-06-03 21:17:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 21:17:39]  is_altstaged=None
[2025-06-03 21:17:39]  is_tar=False
[2025-06-03 21:17:39]  lfn=log.45006595._042216.job.log.tgz.1
[2025-06-03 21:17:39]  mtime=0
[2025-06-03 21:17:39]  protocol_id=None
[2025-06-03 21:17:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 21:17:39]  replicas=None
[2025-06-03 21:17:39]  scope=mc23_13p6TeV
[2025-06-03 21:17:39]  status=None
[2025-06-03 21:17:39]  status_code=0
[2025-06-03 21:17:39]  storage_token=
[2025-06-03 21:17:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677920664/log.45006595._042216.job.log.tgz.1
[2025-06-03 21:17:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/08/log.45006595._042216.job.log.tgz.1
[2025-06-03 21:17:39]  workdir=None
[2025-06-03 21:17:39] ]
[2025-06-03 21:17:39] 2025-06-04 01:17:16,918 | INFO     | transferring file log.45006595._042216.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677920664/log.45006595._042216.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:17:39] 2025-06-04 01:17:16,918 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677920664/log.45006595._042216.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._042216.job
[2025-06-03 21:17:39] 2025-06-04 01:17:16,930 | INFO     | adding to output.list: log.45006595._042216.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/08/log.45006595._042216.job.log.tg
[2025-06-03 21:17:39] 2025-06-04 01:17:16,930 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:17:39] 2025-06-04 01:17:16,931 | INFO     | summary of transferred files:
[2025-06-03 21:17:39] 2025-06-04 01:17:16,931 | INFO     |  -- lfn=log.45006595._042216.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:17:39] 2025-06-04 01:17:16,931 | INFO     | stage-out finished correctly
[2025-06-03 21:17:39] 2025-06-04 01:17:17,190 | INFO     | monitor loop #328: job 0:6677920664 is in state 'finished'
[2025-06-03 21:17:39] 2025-06-04 01:17:17,190 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:17:39] 2025-06-04 01:17:18,005 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:17:39] 2025-06-04 01:17:19,694 | INFO     | monitor loop #329: job 0:6677920664 is in state 'finished'
[2025-06-03 21:17:39] 2025-06-04 01:17:19,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:17:39] 2025-06-04 01:17:21,059 | INFO     | job 6677920664 has state=finished
[2025-06-03 21:17:39] 2025-06-04 01:17:21,060 | INFO     | preparing for final server update for job 6677920664 in state='finished'
[2025-06-03 21:17:39] 2025-06-04 01:17:21,060 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:17:39] 2025-06-04 01:17:21,060 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:17:39] 2025-06-04 01:17:21,060 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:17:39] 2025-06-04 01:17:21,061 | INFO     | job 6677920664 has finished - writing final server update
[2025-06-03 21:17:39] 2025-06-04 01:17:21,061 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:17:39] 2025-06-04 01:17:21,075 | INFO     | executing command: lscpu
[2025-06-03 21:17:39] 2025-06-04 01:17:21,133 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:17:39] 2025-06-04 01:17:22,197 | INFO     | monitor loop #330: job 0:6677920664 is in state 'finished'
[2025-06-03 21:17:39] 2025-06-04 01:17:22,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:17:39] 2025-06-04 01:17:24,288 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:17:39] 2025-06-04 01:17:24,288 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677920664/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:17:39] 2025-06-04 01:17:24,289 | INFO     | extracted standard info from prmon json
[2025-06-03 21:17:39] 2025-06-04 01:17:24,289 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:17:39] 2025-06-04 01:17:24,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:17:39] 2025-06-04 01:17:24,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:17:39] 2025-06-04 01:17:24,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:17:39] 2025-06-04 01:17:24,292 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:17:39] 2025-06-04 01:17:24,292 | INFO     | sum of square deviations: 93240818.0
[2025-06-03 21:17:39] 2025-06-04 01:17:24,293 | INFO     | sum of deviations: 7083686305.000001
[2025-06-03 21:17:39] 2025-06-04 01:17:24,293 | INFO     | mean x: 1748997675.0
[2025-06-03 21:17:39] 2025-06-04 01:17:24,293 | INFO     | mean y: 2262114.0447761193
[2025-06-03 21:17:39] 2025-06-04 01:17:24,293 | INFO     | -- intersect: -132872493209.04068
[2025-06-03 21:17:39] 2025-06-04 01:17:24,293 | INFO     | intersect: -132872493209.04068
[2025-06-03 21:17:39] 2025-06-04 01:17:24,294 | INFO     | chi2: 0.7730915704068524
[2025-06-03 21:17:39] 2025-06-04 01:17:24,294 | INFO     | -- intersect: -132872493209.04068
[2025-06-03 21:17:39] 2025-06-04 01:17:24,294 | INFO     | current memory leak: 75.97 B/s (using 67 data points, chi2=0.77)
[2025-06-03 21:17:39] 2025-06-04 01:17:24,295 | INFO     | ..............................
[2025-06-03 21:17:39] 2025-06-04 01:17:24,295 | INFO     | . Timing measurements:
[2025-06-03 21:17:39] 2025-06-04 01:17:24,295 | INFO     | . get job = 0 s
[2025-06-03 21:17:39] 2025-06-04 01:17:24,295 | INFO     | . initial setup = 2 s
[2025-06-03 21:17:39] 2025-06-04 01:17:24,295 | INFO     | . payload setup = 5 s
[2025-06-03 21:17:39] 2025-06-04 01:17:24,295 | INFO     | . stage-in = 0 s
[2025-06-03 21:17:39] 2025-06-04 01:17:24,295 | INFO     | . payload execution = 4479 s
[2025-06-03 21:17:39] 2025-06-04 01:17:24,295 | INFO     | . stage-out = 0 s
[2025-06-03 21:17:39] 2025-06-04 01:17:24,296 | INFO     | . log creation = 0 s
[2025-06-03 21:17:39] 2025-06-04 01:17:24,296 | INFO     | ..............................
[2025-06-03 21:17:39] 2025-06-04 01:17:24,405 | INFO     | 
[2025-06-03 21:17:39] 2025-06-04 01:17:24,405 | INFO     | job summary report
[2025-06-03 21:17:39] 2025-06-04 01:17:24,405 | INFO     | --------------------------------------------------
[2025-06-03 21:17:39] 2025-06-04 01:17:24,405 | INFO     | PanDA job id: 6677920664
[2025-06-03 21:17:39] 2025-06-04 01:17:24,405 | INFO     | task id: 45006595
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | errors: (none)
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | pilot state: finished 
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | transexitcode: 0
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | exeerrorcode: 0
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | exeerrordiag: 
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | exitcode: 0
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | exitmsg: OK
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | cpuconsumptiontime: 35283 s
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | nevents: 400
[2025-06-03 21:17:39] 2025-06-04 01:17:24,406 | INFO     | neventsw: 0
[2025-06-03 21:17:39] 2025-06-04 01:17:24,407 | INFO     | pid: 2071557
[2025-06-03 21:17:39] 2025-06-04 01:17:24,407 | INFO     | pgrp: 2071557
[2025-06-03 21:17:39] 2025-06-04 01:17:24,407 | INFO     | corecount: 10
[2025-06-03 21:17:39] 2025-06-04 01:17:24,407 | INFO     | event service: False
[2025-06-03 21:17:39] 2025-06-04 01:17:24,407 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 4488: 2431505, 4490: 2440446, 4491: 2440502, 4497: 2440800}
[2025-06-03 21:17:39] 2025-06-04 01:17:24,407 | INFO     | --------------------------------------------------
[2025-06-03 21:17:39] 2025-06-04 01:17:24,407 | INFO     | 
[2025-06-03 21:17:39] 2025-06-04 01:17:24,407 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 21:17:39] 2025-06-04 01:17:24,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,422 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,422 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,424 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:17:39] 2025-06-04 01:17:24,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,424 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:17:39] 2025-06-04 01:17:24,424 | INFO     | job 6677920664 has completed (purged errors)
[2025-06-03 21:17:39] 2025-06-04 01:17:24,424 | INFO     | overall cleanup function is called
[2025-06-03 21:17:39] 2025-06-04 01:17:25,433 | INFO     | --- collectZombieJob: --- 10, [2071557]
[2025-06-03 21:17:39] 2025-06-04 01:17:25,433 | INFO     | zombie collector waiting for pid 2071557
[2025-06-03 21:17:39] 2025-06-04 01:17:25,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:17:39] 2025-06-04 01:17:25,433 | INFO     | collected zombie processes
[2025-06-03 21:17:39] 2025-06-04 01:17:25,433 | INFO     | will attempt to kill all subprocesses of pid=2071557
[2025-06-03 21:17:39] 2025-06-04 01:17:25,727 | INFO     | process IDs to be killed: [2071557] (in reverse order)
[2025-06-03 21:17:39] 2025-06-04 01:17:25,815 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:17:39] 2025-06-04 01:17:25,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:17:39] 2025-06-04 01:17:25,826 | INFO     | did not find any defunct processes belonging to 2071557
[2025-06-03 21:17:39] 2025-06-04 01:17:25,837 | INFO     | did not find any defunct processes belonging to 2071557
[2025-06-03 21:17:39] 2025-06-04 01:17:25,837 | INFO     | ready for new job
[2025-06-03 21:17:39] 2025-06-04 01:17:25,838 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:17:39] 2025-06-04 01:17:25,839 | INFO     | **************************************
[2025-06-03 21:17:39] 2025-06-04 01:17:25,839 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:17:39] 2025-06-04 01:17:25,839 | INFO     | **************************************
[2025-06-03 21:17:39] 2025-06-04 01:17:25,839 | INFO     | 
[2025-06-03 21:17:39] 2025-06-04 01:17:25,853 | INFO     | architecture information:
[2025-06-03 21:17:39] 2025-06-04 01:17:25,853 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:17:39] 2025-06-04 01:17:25,868 | INFO     | cat /etc/os-release:
[2025-06-03 21:17:39] NAME="CentOS Linux"
[2025-06-03 21:17:39] VERSION="7 (Core)"
[2025-06-03 21:17:39] ID="centos"
[2025-06-03 21:17:39] ID_LIKE="rhel fedora"
[2025-06-03 21:17:39] VERSION_ID="7"
[2025-06-03 21:17:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:17:39] ANSI_COLOR="0;31"
[2025-06-03 21:17:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:17:39] HOME_URL="https://www.centos.org/"
[2025-06-03 21:17:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:17:39] 
[2025-06-03 21:17:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:17:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:17:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:17:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:17:39] 
[2025-06-03 21:17:39] 2025-06-04 01:17:25,868 | INFO     | **************************************
[2025-06-03 21:17:39] 2025-06-04 01:17:26,372 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 21:17:39] 2025-06-04 01:17:26,384 | INFO     | sufficient remaining disk space (76604768256 B)
[2025-06-03 21:17:39] 2025-06-04 01:17:26,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:17:39] 2025-06-04 01:17:26,385 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:17:39] 2025-06-04 01:17:26,385 | INFO     | update_server=False
[2025-06-03 21:17:39] 2025-06-04 01:17:26,385 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:17:39] 2025-06-04 01:17:26,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:17:39] 2025-06-04 01:17:26,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:17:39] 2025-06-04 01:17:26,387 | INFO     | aborting loop
[2025-06-03 21:17:39] 2025-06-04 01:17:27,015 | INFO     | all payload control threads have been joined
[2025-06-03 21:17:39] 2025-06-04 01:17:27,111 | INFO     | all data control threads have been joined
[2025-06-03 21:17:39] 2025-06-04 01:17:27,237 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:17:39] 2025-06-04 01:17:27,238 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:17:39] 2025-06-04 01:17:27,238 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:17:39] 2025-06-04 01:17:27,390 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:27,391 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:27,391 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:27,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:17:39] 2025-06-04 01:17:27,559 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:27,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:27,840 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:27,915 | INFO     | all job control threads have been joined
[2025-06-03 21:17:39] 2025-06-04 01:17:28,021 | INFO     | [payload] control thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:28,117 | INFO     | [data] control thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:28,272 | INFO     | [job] validate thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:28,391 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:28,485 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:28,562 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:28,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:17:39] 2025-06-04 01:17:28,841 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:28,921 | INFO     | [job] control thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:29,504 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:32,621 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:17:39] 2025-06-04 01:17:34,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066308638528)>', '<ExcThread(monitor, started 140065955096320)>']
[2025-06-03 21:17:39] 2025-06-04 01:17:35,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:17:39] 2025-06-04 01:17:35,278 | INFO     | [monitor] control thread has ended
[2025-06-03 21:17:39] 2025-06-04 01:17:39,453 | INFO     | all workflow threads have been joined
[2025-06-03 21:17:39] 2025-06-04 01:17:39,454 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:17:39] 2025-06-04 01:17:39,454 | INFO     | traces error code: 0
[2025-06-03 21:17:39] 2025-06-04 01:17:39,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:17:39] 2025-06-04 01:17:39,616 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:17:39] 2025-06-04 01:17:39,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:17:39] 2025-06-04 01:17:39,620 [wrapper] pilotpid: 2064963
[2025-06-03 21:17:39] 2025-06-04 01:17:39,622 [wrapper] Pilot exit status: 0
[2025-06-03 21:17:39] 2025-06-04 01:17:39,629 [wrapper] pandaids: 6677920664
[2025-06-03 21:17:39] 2025-06-04 01:17:39,686 [wrapper] cleanup supervisor_pilot 2512405 2064964
[2025-06-03 21:17:39] 2025-06-04 01:17:39,688 [wrapper] Test setup, not cleaning
[2025-06-03 21:17:39] 2025-06-04 01:17:39,691 [wrapper] apfmon messages muted
[2025-06-03 21:17:39] 2025-06-04 01:17:39,693 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:17:39] 2025-06-04 01:17:39,695 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:17:39]  *** Error codes and diagnostics ***
[2025-06-03 21:17:39]     "exeErrorCode": 0,
[2025-06-03 21:17:39]     "exeErrorDiag": "",
[2025-06-03 21:17:39]     "pilotErrorCode": 0,
[2025-06-03 21:17:39]     "pilotErrorDiag": "",
[2025-06-03 21:17:39]  *** Listing of results directory ***
[2025-06-03 21:17:39] total 385432
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 14:30 queuedata.json
[2025-06-03 21:17:39] -rwx------. 1 boincer umatlas     37140 Jun  3 14:30 runpilot2-wrapper.sh
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas       100 Jun  3 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:17:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 20:02 run_atlas
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas       105 Jun  3 20:02 job.xml
[2025-06-03 21:17:39] -rw-r--r--. 2 boincer umatlas 213426457 Jun  3 20:02 EVNT.45006593._001693.pool.root.1
[2025-06-03 21:17:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:02 start_atlas.sh
[2025-06-03 21:17:39] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 20:02 shared
[2025-06-03 21:17:39] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 20:02 input.tar.gz
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas         0 Jun  3 20:02 boinc_lockfile
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 20:02 pandaJob.out
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas    986077 Jun  3 20:02 agis_schedconf.cvmfs.json
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas   1603667 Jun  3 20:02 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:17:39] drwx------. 4 boincer umatlas      4096 Jun  3 20:02 pilot3
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas      6658 Jun  3 21:11 init_data.xml
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas        95 Jun  3 21:16 pilot_heartbeat.json
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas 175847007 Jun  3 21:16 HITS.45006595._042216.pool.root.1
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas       529 Jun  3 21:16 boinc_task_state.xml
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas      1035 Jun  3 21:17 memory_monitor_summary.json
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas    343246 Jun  3 21:17 log.45006595._042216.job.log.tgz.1
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas      7715 Jun  3 21:17 heartbeat.json
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas        27 Jun  3 21:17 wrapper_checkpoint.txt
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:17 boinc_mmap_file
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas      4353 Jun  3 21:17 pilotlog.txt
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas    444001 Jun  3 21:17 log.45006595._042216.job.log.1
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas       357 Jun  3 21:17 output.list
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:17 runtime_log
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas    808960 Jun  3 21:17 result.tar.gz
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas      8651 Jun  3 21:17 runtime_log.err
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas       651 Jun  3 21:17 huDLDmUalg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmglKDm6XH4Xn.diag
[2025-06-03 21:17:39] -rw-r--r--. 1 boincer umatlas     21225 Jun  3 21:17 stderr.txt
[2025-06-03 21:17:39] HITS file was successfully produced:
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas 175847007 Jun  3 21:16 shared/HITS.pool.root.1
[2025-06-03 21:17:39]  *** Contents of shared directory: ***
[2025-06-03 21:17:39] total 381464
[2025-06-03 21:17:39] -rw-r--r--. 2 boincer umatlas 213426457 Jun  3 20:02 ATLAS.root_0
[2025-06-03 21:17:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:02 start_atlas.sh
[2025-06-03 21:17:39] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 20:02 input.tar.gz
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas 175847007 Jun  3 21:16 HITS.pool.root.1
[2025-06-03 21:17:39] -rw-------. 1 boincer umatlas    808960 Jun  3 21:17 result.tar.gz
21:17:40 (2059050): run_atlas exited; CPU time 35404.543692
21:17:40 (2059050): called boinc_finish(0)

</stderr_txt>
]]>

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