Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:39:46 (16851): wrapper (7.7.26015): starting
10:39:46 (16851): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:39:46] Arguments: --nthreads 8
[2025-06-04 10:39:46] Threads: 8
[2025-06-04 10:39:46] Checking for CVMFS
[2025-06-04 10:39:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:39:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:39:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:39:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:39:49] 2.11.2.0 25379 33092 99592 146773 3 16 18896128 25165824 3908 130560 0 17349546 99.849 18400815 2606 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:39:49] CVMFS is ok
[2025-06-04 10:39:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:39:49] Checking for apptainer binary...
[2025-06-04 10:39:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:39:49] Running /usr/bin/apptainer --version
[2025-06-04 10:39:49] apptainer version 1.3.2-1.el7
[2025-06-04 10:39:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:40:02] cg-vwn336.simple-grid.lan
[2025-06-04 10:40:02] apptainer works
[2025-06-04 10:40:02] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:40:02] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:40:02] Starting ATLAS job with PandaID=6678014748
[2025-06-04 10:40:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:46:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:46:27] 2025-06-04 12:35:32,315 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6678014748/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:46:27] 2025-06-04 12:35:32,316 | INFO     | extracted standard info from prmon json
[2025-06-04 14:46:27] 2025-06-04 12:35:32,316 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:46:27] 2025-06-04 12:35:32,316 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:46:27] 2025-06-04 12:35:32,317 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:46:27] 2025-06-04 12:35:32,317 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:46:27] 2025-06-04 12:35:32,322 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:46:27] 2025-06-04 12:35:32,323 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,324 | INFO     | sum of deviations: 56380995972.5
[2025-06-04 14:46:27] 2025-06-04 12:35:32,325 | INFO     | mean x: 1749033745.5
[2025-06-04 14:46:27] 2025-06-04 12:35:32,325 | INFO     | mean y: 2437489.831818182
[2025-06-04 14:46:27] 2025-06-04 12:35:32,325 | INFO     | -- intersect: -29864688836.972218
[2025-06-04 14:46:27] 2025-06-04 12:35:32,325 | INFO     | intersect: -29864688836.972218
[2025-06-04 14:46:27] 2025-06-04 12:35:32,325 | INFO     | chi2: 5.606433587940271
[2025-06-04 14:46:27] 2025-06-04 12:35:32,332 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,334 | INFO     | sum of deviations: 69330338120.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,334 | INFO     | mean x: 1749033593.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,334 | INFO     | mean y: 2446279.5023255814
[2025-06-04 14:46:27] 2025-06-04 12:35:32,334 | INFO     | -- intersect: -39346858232.15194
[2025-06-04 14:46:27] 2025-06-04 12:35:32,334 | INFO     | intersect: -39346858232.15194
[2025-06-04 14:46:27] 2025-06-04 12:35:32,335 | INFO     | chi2: 4.88776697713172
[2025-06-04 14:46:27] 2025-06-04 12:35:32,335 | INFO     | current chi2=4.88776697713172 (change=12.818605616847764 %)
[2025-06-04 14:46:27] 2025-06-04 12:35:32,335 | INFO     | right removable region: 214
[2025-06-04 14:46:27] 2025-06-04 12:35:32,335 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,337 | INFO     | sum of deviations: -15037661195.999996
[2025-06-04 14:46:27] 2025-06-04 12:35:32,337 | INFO     | mean x: 1749033898.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,337 | INFO     | mean y: 2486902.8558139536
[2025-06-04 14:46:27] 2025-06-04 12:35:32,338 | INFO     | -- intersect: 8537301945.960054
[2025-06-04 14:46:27] 2025-06-04 12:35:32,338 | INFO     | intersect: 8537301945.960054
[2025-06-04 14:46:27] 2025-06-04 12:35:32,338 | INFO     | chi2: 1.3816168716026458
[2025-06-04 14:46:27] 2025-06-04 12:35:32,338 | INFO     | current chi2=1.3816168716026458 (change=75.35658186383273 %)
[2025-06-04 14:46:27] 2025-06-04 12:35:32,339 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 14:46:27] 2025-06-04 12:35:32,340 | INFO     | sum of deviations: -33503746933.000008
[2025-06-04 14:46:27] 2025-06-04 12:35:32,341 | INFO     | mean x: 1749034050.5
[2025-06-04 14:46:27] 2025-06-04 12:35:32,341 | INFO     | mean y: 2500179.2666666666
[2025-06-04 14:46:27] 2025-06-04 12:35:32,341 | INFO     | -- intersect: 20408843262.095276
[2025-06-04 14:46:27] 2025-06-04 12:35:32,341 | INFO     | intersect: 20408843262.095276
[2025-06-04 14:46:27] 2025-06-04 12:35:32,341 | INFO     | chi2: 0.9244793237868639
[2025-06-04 14:46:27] 2025-06-04 12:35:32,342 | INFO     | current chi2=0.9244793237868639 (change=33.08714284051209 %)
[2025-06-04 14:46:27] 2025-06-04 12:35:32,342 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,344 | INFO     | sum of deviations: -29040865177.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,344 | INFO     | mean x: 1749034203.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,344 | INFO     | mean y: 2496752.1902439026
[2025-06-04 14:46:27] 2025-06-04 12:35:32,344 | INFO     | -- intersect: 19016702111.71242
[2025-06-04 14:46:27] 2025-06-04 12:35:32,344 | INFO     | intersect: 19016702111.71242
[2025-06-04 14:46:27] 2025-06-04 12:35:32,345 | INFO     | chi2: 0.9096565050572205
[2025-06-04 14:46:27] 2025-06-04 12:35:32,345 | INFO     | current chi2=0.9096565050572205 (change=1.603369415437654 %)
[2025-06-04 14:46:27] 2025-06-04 12:35:32,345 | INFO     | left removable region: 30
[2025-06-04 14:46:27] 2025-06-04 12:35:32,345 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,346 | INFO     | sum of deviations: 5084013157.999999
[2025-06-04 14:46:27] 2025-06-04 12:35:32,347 | INFO     | mean x: 1749034477.5
[2025-06-04 14:46:27] 2025-06-04 12:35:32,347 | INFO     | mean y: 2489761.5108695654
[2025-06-04 14:46:27] 2025-06-04 12:35:32,347 | INFO     | -- intersect: -4600987170.831409
[2025-06-04 14:46:27] 2025-06-04 12:35:32,347 | INFO     | intersect: -4600987170.831409
[2025-06-04 14:46:27] 2025-06-04 12:35:32,347 | INFO     | chi2: 0.0008967310476070073
[2025-06-04 14:46:27] 2025-06-04 12:35:32,348 | INFO     | -- intersect: -4600987170.831409
[2025-06-04 14:46:27] 2025-06-04 12:35:32,348 | INFO     | current memory leak: 2.63 B/s (using 184 data points, chi2=0.00)
[2025-06-04 14:46:27] 2025-06-04 12:35:32,348 | INFO     | ..............................
[2025-06-04 14:46:27] 2025-06-04 12:35:32,349 | INFO     | . Timing measurements:
[2025-06-04 14:46:27] 2025-06-04 12:35:32,349 | INFO     | . get job = 0 s
[2025-06-04 14:46:27] 2025-06-04 12:35:32,349 | INFO     | . initial setup = 11 s
[2025-06-04 14:46:27] 2025-06-04 12:35:32,349 | INFO     | . payload setup = 157 s
[2025-06-04 14:46:27] 2025-06-04 12:35:32,349 | INFO     | . stage-in = 0 s
[2025-06-04 14:46:27] 2025-06-04 12:35:32,349 | INFO     | . payload execution = 13518 s
[2025-06-04 14:46:27] 2025-06-04 12:35:32,349 | INFO     | . stage-out = 4 s
[2025-06-04 14:46:27] 2025-06-04 12:35:32,349 | INFO     | . log creation = 1 s
[2025-06-04 14:46:27] 2025-06-04 12:35:32,349 | INFO     | ..............................
[2025-06-04 14:46:27] 2025-06-04 12:35:32,497 | INFO     | 
[2025-06-04 14:46:27] 2025-06-04 12:35:32,497 | INFO     | job summary report
[2025-06-04 14:46:27] 2025-06-04 12:35:32,497 | INFO     | --------------------------------------------------
[2025-06-04 14:46:27] 2025-06-04 12:35:32,497 | INFO     | PanDA job id: 6678014748
[2025-06-04 14:46:27] 2025-06-04 12:35:32,497 | INFO     | task id: 45006595
[2025-06-04 14:46:27] 2025-06-04 12:35:32,497 | INFO     | errors: (none)
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | pilot state: finished 
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | transexitcode: 0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | exeerrorcode: 0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | exeerrordiag: 
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | exitcode: 0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | exitmsg: OK
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | cpuconsumptiontime: 50563 s
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | nevents: 400
[2025-06-04 14:46:27] 2025-06-04 12:35:32,498 | INFO     | neventsw: 0
[2025-06-04 14:46:27] 2025-06-04 12:35:32,499 | INFO     | pid: 2987
[2025-06-04 14:46:27] 2025-06-04 12:35:32,499 | INFO     | pgrp: 2987
[2025-06-04 14:46:27] 2025-06-04 12:35:32,499 | INFO     | corecount: 8
[2025-06-04 14:46:27] 2025-06-04 12:35:32,499 | INFO     | event service: False
[2025-06-04 14:46:27] 2025-06-04 12:35:32,499 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 76: 2405508, 85: 2405770, 87: 2405798, 13679: 2435612
[2025-06-04 14:46:27] 2025-06-04 12:35:32,499 | INFO     | --------------------------------------------------
[2025-06-04 14:46:27] 2025-06-04 12:35:32,499 | INFO     | 
[2025-06-04 14:46:27] 2025-06-04 12:35:32,499 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 14:46:27] 2025-06-04 12:35:33,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,086 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,086 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,086 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,088 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,088 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:46:27] 2025-06-04 12:35:33,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,088 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:46:27] 2025-06-04 12:35:33,088 | INFO     | job 6678014748 has completed (purged errors)
[2025-06-04 14:46:27] 2025-06-04 12:35:33,088 | INFO     | overall cleanup function is called
[2025-06-04 14:46:27] 2025-06-04 12:35:34,098 | INFO     | --- collectZombieJob: --- 10, [2987]
[2025-06-04 14:46:27] 2025-06-04 12:35:34,098 | INFO     | zombie collector waiting for pid 2987
[2025-06-04 14:46:27] 2025-06-04 12:35:34,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:46:27] 2025-06-04 12:35:34,098 | INFO     | collected zombie processes
[2025-06-04 14:46:27] 2025-06-04 12:35:34,098 | INFO     | will attempt to kill all subprocesses of pid=2987
[2025-06-04 14:46:27] 2025-06-04 12:35:34,214 | INFO     | process IDs to be killed: [2987] (in reverse order)
[2025-06-04 14:46:27] 2025-06-04 12:35:34,946 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:46:27] 2025-06-04 12:35:34,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:46:27] 2025-06-04 12:35:34,950 | INFO     | did not find any defunct processes belonging to 2987
[2025-06-04 14:46:27] 2025-06-04 12:35:34,952 | INFO     | did not find any defunct processes belonging to 2987
[2025-06-04 14:46:27] 2025-06-04 12:35:34,953 | INFO     | ready for new job
[2025-06-04 14:46:27] 2025-06-04 12:35:34,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:46:27] 2025-06-04 12:35:34,954 | INFO     | **************************************
[2025-06-04 14:46:27] 2025-06-04 12:35:34,955 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:46:27] 2025-06-04 12:35:34,955 | INFO     | **************************************
[2025-06-04 14:46:27] 2025-06-04 12:35:34,955 | INFO     | 
[2025-06-04 14:46:27] 2025-06-04 12:35:34,955 | INFO     | pilot is running in a VM
[2025-06-04 14:46:27] 2025-06-04 12:35:34,955 | INFO     | architecture information:
[2025-06-04 14:46:27] 2025-06-04 12:35:34,965 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:46:27] 2025-06-04 12:35:35,186 | INFO     | cat /etc/os-release:
[2025-06-04 14:46:27] NAME="CentOS Linux"
[2025-06-04 14:46:27] VERSION="7 (Core)"
[2025-06-04 14:46:27] ID="centos"
[2025-06-04 14:46:27] ID_LIKE="rhel fedora"
[2025-06-04 14:46:27] VERSION_ID="7"
[2025-06-04 14:46:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:46:27] ANSI_COLOR="0;31"
[2025-06-04 14:46:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:46:27] HOME_URL="https://www.centos.org/"
[2025-06-04 14:46:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:46:27] 
[2025-06-04 14:46:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:46:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:46:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:46:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:46:27] 
[2025-06-04 14:46:27] 2025-06-04 12:35:35,187 | INFO     | **************************************
[2025-06-04 14:46:27] 2025-06-04 12:35:35,691 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 14:46:27] 2025-06-04 12:35:35,873 | INFO     | sufficient remaining disk space (496613982208 B)
[2025-06-04 14:46:27] 2025-06-04 12:35:35,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:46:27] 2025-06-04 12:35:35,873 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:46:27] 2025-06-04 12:35:35,874 | INFO     | update_server=False
[2025-06-04 14:46:27] 2025-06-04 12:35:35,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:46:27] 2025-06-04 12:35:35,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:46:27] 2025-06-04 12:35:35,876 | INFO     | aborting loop
[2025-06-04 14:46:27] 2025-06-04 12:35:35,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:46:27] 2025-06-04 12:35:36,000 | INFO     | all data control threads have been joined
[2025-06-04 14:46:27] 2025-06-04 12:35:36,117 | INFO     | all payload control threads have been joined
[2025-06-04 14:46:27] 2025-06-04 12:35:36,811 | INFO     | all job control threads have been joined
[2025-06-04 14:46:27] 2025-06-04 12:35:36,825 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:46:27] 2025-06-04 12:35:36,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:46:27] 2025-06-04 12:35:36,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:46:27] 2025-06-04 12:35:36,879 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:36,882 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:37,006 | INFO     | [data] control thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:37,124 | INFO     | [payload] control thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:37,257 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:37,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:46:27] 2025-06-04 12:35:37,345 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:37,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:46:27] 2025-06-04 12:35:37,628 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:37,679 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:37,817 | INFO     | [job] control thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:37,833 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:37,884 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:38,078 | INFO     | [job] validate thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:38,164 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:38,469 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:38,516 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:41,269 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:46:27] 2025-06-04 12:35:43,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307578066752)>', '<ExcThread(monitor, started 140307270178560)>']
[2025-06-04 14:46:27] 2025-06-04 12:35:43,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:46:27] 2025-06-04 12:35:43,866 | INFO     | [monitor] control thread has ended
[2025-06-04 14:46:27] 2025-06-04 12:35:48,080 | INFO     | all workflow threads have been joined
[2025-06-04 14:46:27] 2025-06-04 12:35:48,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:46:27] 2025-06-04 12:35:48,080 | INFO     | traces error code: 0
[2025-06-04 14:46:27] 2025-06-04 12:35:48,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:46:27] 2025-06-04 12:35:48,423 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:46:27] 2025-06-04 12:35:48,486 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:46:27] 2025-06-04 12:35:48,586 [wrapper] pilotpid: 24741
[2025-06-04 14:46:27] 2025-06-04 12:35:48,681 [wrapper] Pilot exit status: 0
[2025-06-04 14:46:27] 2025-06-04 12:35:49,018 [wrapper] pandaids: 6678014748
[2025-06-04 14:46:27] 2025-06-04 12:35:49,664 [wrapper] cleanup supervisor_pilot 12060 24742
[2025-06-04 14:46:27] 2025-06-04 12:35:49,786 [wrapper] Test setup, not cleaning
[2025-06-04 14:46:27] 2025-06-04 12:35:49,904 [wrapper] apfmon messages muted
[2025-06-04 14:46:27] 2025-06-04 12:35:50,015 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:46:27] 2025-06-04 12:35:50,096 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:46:27]  *** Error codes and diagnostics ***
[2025-06-04 14:46:27]     "exeErrorCode": 0,
[2025-06-04 14:46:27]     "exeErrorDiag": "",
[2025-06-04 14:46:27]     "pilotErrorCode": 0,
[2025-06-04 14:46:27]     "pilotErrorDiag": "",
[2025-06-04 14:46:27]  *** Listing of results directory ***
[2025-06-04 14:46:27] total 395320
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:01 queuedata.json
[2025-06-04 14:46:27] -rwx------. 1 boinc boinc     37140 Jun  3 22:02 runpilot2-wrapper.sh
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:46:27] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:39 run_atlas
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:39 job.xml
[2025-06-04 14:46:27] -rw-r--r--. 2 boinc boinc 216945017 Jun  4 10:39 EVNT.45006593._001777.pool.root.1
[2025-06-04 14:46:27] -rw-r--r--. 2 boinc boinc    508879 Jun  4 10:39 input.tar.gz
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc      6391 Jun  4 10:39 init_data.xml
[2025-06-04 14:46:27] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:39 start_atlas.sh
[2025-06-04 14:46:27] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:39 shared
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:39 boinc_lockfile
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:40 pandaJob.out
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc    986774 Jun  4 10:43 agis_schedconf.cvmfs.json
[2025-06-04 14:46:27] drwx------. 4 boinc boinc      4096 Jun  4 10:43 pilot3
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc 180943115 Jun  4 14:32 HITS.45006595._044343.pool.root.1
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:32 boinc_task_state.xml
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc      1014 Jun  4 14:33 memory_monitor_summary.json
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc   1598969 Jun  4 14:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc    370621 Jun  4 14:34 log.45006595._044343.job.log.tgz.1
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc      7686 Jun  4 14:35 heartbeat.json
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc        95 Jun  4 14:35 pilot_heartbeat.json
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc      4416 Jun  4 14:35 pilotlog.txt
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc   1181986 Jun  4 14:35 log.45006595._044343.job.log.1
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc       357 Jun  4 14:35 output.list
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:35 runtime_log
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc   1566720 Jun  4 14:35 result.tar.gz
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc      8659 Jun  4 14:35 runtime_log.err
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc       657 Jun  4 14:35 deLKDmW1mg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkpZKDmm8jzRo.diag
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:46 boinc_mmap_file
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:46 wrapper_checkpoint.txt
[2025-06-04 14:46:27] -rw-r--r--. 1 boinc boinc     20520 Jun  4 14:46 stderr.txt
[2025-06-04 14:46:27] HITS file was successfully produced:
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc 180943115 Jun  4 14:32 shared/HITS.pool.root.1
[2025-06-04 14:46:27]  *** Contents of shared directory: ***
[2025-06-04 14:46:27] total 390616
[2025-06-04 14:46:27] -rw-r--r--. 2 boinc boinc 216945017 Jun  4 10:39 ATLAS.root_0
[2025-06-04 14:46:27] -rw-r--r--. 2 boinc boinc    508879 Jun  4 10:39 input.tar.gz
[2025-06-04 14:46:27] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:39 start_atlas.sh
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc 180943115 Jun  4 14:32 HITS.pool.root.1
[2025-06-04 14:46:27] -rw-------. 1 boinc boinc   1566720 Jun  4 14:35 result.tar.gz
14:46:29 (16851): run_atlas exited; CPU time 50755.637960
14:46:29 (16851): called boinc_finish(0)

</stderr_txt>
]]>

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