Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:31:12 (21912): wrapper (7.7.26015): starting
10:31:12 (21912): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:31:12] Arguments: --nthreads 8
[2025-06-04 10:31:12] Threads: 8
[2025-06-04 10:31:12] Checking for CVMFS
[2025-06-04 10:31:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:31:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:31:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:31:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:31:15] 2.11.2.0 19466 32971 90532 146773 3 59 14644839 25165824 3906 130560 0 17135959 99.834 18413796 1996 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:31:15] CVMFS is ok
[2025-06-04 10:31:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:31:15] Checking for apptainer binary...
[2025-06-04 10:31:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:31:15] Running /usr/bin/apptainer --version
[2025-06-04 10:31:15] apptainer version 1.3.2-1.el7
[2025-06-04 10:31:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:32:29] cg-vwn426.simple-grid.lan
[2025-06-04 10:32:29] apptainer works
[2025-06-04 10:32:29] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:32:29] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:32:29] Starting ATLAS job with PandaID=6678015307
[2025-06-04 10:32:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:54:10]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:54:10] 2025-06-04 12:34:18,168 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:54:10] 2025-06-04 12:34:18,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:54:10] 2025-06-04 12:34:18,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:54:10] 2025-06-04 12:34:18,173 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:54:10] 2025-06-04 12:34:18,173 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,175 | INFO     | sum of deviations: 105173476594.0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,176 | INFO     | mean x: 1749033500.0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,176 | INFO     | mean y: 2408843.066666667
[2025-06-04 14:54:10] 2025-06-04 12:34:18,176 | INFO     | -- intersect: -52079507824.46974
[2025-06-04 14:54:10] 2025-06-04 12:34:18,176 | INFO     | intersect: -52079507824.46974
[2025-06-04 14:54:10] 2025-06-04 12:34:18,176 | INFO     | chi2: 8.879116790105076
[2025-06-04 14:54:10] 2025-06-04 12:34:18,177 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,179 | INFO     | sum of deviations: 117380997497.50002
[2025-06-04 14:54:10] 2025-06-04 12:34:18,179 | INFO     | mean x: 1749033347.5
[2025-06-04 14:54:10] 2025-06-04 12:34:18,179 | INFO     | mean y: 2416750.159090909
[2025-06-04 14:54:10] 2025-06-04 12:34:18,179 | INFO     | -- intersect: -62178682082.62827
[2025-06-04 14:54:10] 2025-06-04 12:34:18,180 | INFO     | intersect: -62178682082.62827
[2025-06-04 14:54:10] 2025-06-04 12:34:18,180 | INFO     | chi2: 8.200526347696739
[2025-06-04 14:54:10] 2025-06-04 12:34:18,180 | INFO     | current chi2=8.200526347696739 (change=7.642544393205429 %)
[2025-06-04 14:54:10] 2025-06-04 12:34:18,180 | INFO     | right removable region: 219
[2025-06-04 14:54:10] 2025-06-04 12:34:18,181 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,182 | INFO     | sum of deviations: 26167032902.500008
[2025-06-04 14:54:10] 2025-06-04 12:34:18,183 | INFO     | mean x: 1749033652.5
[2025-06-04 14:54:10] 2025-06-04 12:34:18,183 | INFO     | mean y: 2461139.168181818
[2025-06-04 14:54:10] 2025-06-04 12:34:18,183 | INFO     | -- intersect: -13859196007.18486
[2025-06-04 14:54:10] 2025-06-04 12:34:18,183 | INFO     | intersect: -13859196007.18486
[2025-06-04 14:54:10] 2025-06-04 12:34:18,183 | INFO     | chi2: 3.564001443665213
[2025-06-04 14:54:10] 2025-06-04 12:34:18,184 | INFO     | current chi2=3.564001443665213 (change=59.86085634511586 %)
[2025-06-04 14:54:10] 2025-06-04 12:34:18,184 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,186 | INFO     | sum of deviations: -30254606271.999992
[2025-06-04 14:54:10] 2025-06-04 12:34:18,186 | INFO     | mean x: 1749033805.0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,186 | INFO     | mean y: 2500161.562790698
[2025-06-04 14:54:10] 2025-06-04 12:34:18,186 | INFO     | -- intersect: 17173884171.20873
[2025-06-04 14:54:10] 2025-06-04 12:34:18,186 | INFO     | intersect: 17173884171.20873
[2025-06-04 14:54:10] 2025-06-04 12:34:18,187 | INFO     | chi2: 1.0175667477545247
[2025-06-04 14:54:10] 2025-06-04 12:34:18,187 | INFO     | current chi2=1.0175667477545247 (change=71.4487560165503 %)
[2025-06-04 14:54:10] 2025-06-04 12:34:18,187 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 14:54:10] 2025-06-04 12:34:18,189 | INFO     | sum of deviations: -36303916583.49999
[2025-06-04 14:54:10] 2025-06-04 12:34:18,189 | INFO     | mean x: 1749033957.5
[2025-06-04 14:54:10] 2025-06-04 12:34:18,189 | INFO     | mean y: 2504480.6333333333
[2025-06-04 14:54:10] 2025-06-04 12:34:18,189 | INFO     | -- intersect: 22114363764.4087
[2025-06-04 14:54:10] 2025-06-04 12:34:18,189 | INFO     | intersect: 22114363764.4087
[2025-06-04 14:54:10] 2025-06-04 12:34:18,190 | INFO     | chi2: 0.9300403559788227
[2025-06-04 14:54:10] 2025-06-04 12:34:18,190 | INFO     | current chi2=0.9300403559788227 (change=8.601538126992397 %)
[2025-06-04 14:54:10] 2025-06-04 12:34:18,190 | INFO     | left removable region: 30
[2025-06-04 14:54:10] 2025-06-04 12:34:18,190 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,192 | INFO     | sum of deviations: -1273376951.9999993
[2025-06-04 14:54:10] 2025-06-04 12:34:18,192 | INFO     | mean x: 1749034232.0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,192 | INFO     | mean y: 2497879.095238095
[2025-06-04 14:54:10] 2025-06-04 12:34:18,192 | INFO     | -- intersect: 1066404755.986787
[2025-06-04 14:54:10] 2025-06-04 12:34:18,192 | INFO     | intersect: 1066404755.986787
[2025-06-04 14:54:10] 2025-06-04 12:34:18,193 | INFO     | chi2: 0.04840551844476259
[2025-06-04 14:54:10] 2025-06-04 12:34:18,193 | INFO     | -- intersect: 1066404755.986787
[2025-06-04 14:54:10] 2025-06-04 12:34:18,193 | INFO     | current memory leak: -0.61 B/s (using 189 data points, chi2=0.05)
[2025-06-04 14:54:10] 2025-06-04 12:34:18,194 | INFO     | ..............................
[2025-06-04 14:54:10] 2025-06-04 12:34:18,194 | INFO     | . Timing measurements:
[2025-06-04 14:54:10] 2025-06-04 12:34:18,194 | INFO     | . get job = 0 s
[2025-06-04 14:54:10] 2025-06-04 12:34:18,194 | INFO     | . initial setup = 8 s
[2025-06-04 14:54:10] 2025-06-04 12:34:18,195 | INFO     | . payload setup = 185 s
[2025-06-04 14:54:10] 2025-06-04 12:34:18,195 | INFO     | . stage-in = 0 s
[2025-06-04 14:54:10] 2025-06-04 12:34:18,195 | INFO     | . payload execution = 13836 s
[2025-06-04 14:54:10] 2025-06-04 12:34:18,195 | INFO     | . stage-out = 4 s
[2025-06-04 14:54:10] 2025-06-04 12:34:18,195 | INFO     | . log creation = 1 s
[2025-06-04 14:54:10] 2025-06-04 12:34:18,195 | INFO     | ..............................
[2025-06-04 14:54:10] 2025-06-04 12:34:18,332 | INFO     | 
[2025-06-04 14:54:10] 2025-06-04 12:34:18,332 | INFO     | job summary report
[2025-06-04 14:54:10] 2025-06-04 12:34:18,332 | INFO     | --------------------------------------------------
[2025-06-04 14:54:10] 2025-06-04 12:34:18,332 | INFO     | PanDA job id: 6678015307
[2025-06-04 14:54:10] 2025-06-04 12:34:18,332 | INFO     | task id: 45006595
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | errors: (none)
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | pilot state: finished 
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | transexitcode: 0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | exeerrorcode: 0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | exeerrordiag: 
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | exitcode: 0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | exitmsg: OK
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | cpuconsumptiontime: 51026 s
[2025-06-04 14:54:10] 2025-06-04 12:34:18,333 | INFO     | nevents: 400
[2025-06-04 14:54:10] 2025-06-04 12:34:18,334 | INFO     | neventsw: 0
[2025-06-04 14:54:10] 2025-06-04 12:34:18,334 | INFO     | pid: 3807
[2025-06-04 14:54:10] 2025-06-04 12:34:18,334 | INFO     | pgrp: 3807
[2025-06-04 14:54:10] 2025-06-04 12:34:18,334 | INFO     | corecount: 8
[2025-06-04 14:54:10] 2025-06-04 12:34:18,334 | INFO     | event service: False
[2025-06-04 14:54:10] 2025-06-04 12:34:18,334 | INFO     | sizes: {0: 2404906, 1: 2405161, 2: 2405161, 12: 2405189, 23: 2405217, 34: 2405245, 45: 2405401, 55: 2405429, 66: 2405457, 77: 2405485, 88: 2405541, 92: 2406055, 98
[2025-06-04 14:54:10] 2025-06-04 12:34:18,334 | INFO     | --------------------------------------------------
[2025-06-04 14:54:10] 2025-06-04 12:34:18,334 | INFO     | 
[2025-06-04 14:54:10] 2025-06-04 12:34:18,334 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-04 14:54:10] 2025-06-04 12:34:18,363 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,363 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,363 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,363 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,363 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,365 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:54:10] 2025-06-04 12:34:18,365 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,365 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:54:10] 2025-06-04 12:34:18,365 | INFO     | job 6678015307 has completed (purged errors)
[2025-06-04 14:54:10] 2025-06-04 12:34:18,365 | INFO     | overall cleanup function is called
[2025-06-04 14:54:10] 2025-06-04 12:34:19,374 | INFO     | --- collectZombieJob: --- 10, [3807]
[2025-06-04 14:54:10] 2025-06-04 12:34:19,375 | INFO     | zombie collector waiting for pid 3807
[2025-06-04 14:54:10] 2025-06-04 12:34:19,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:54:10] 2025-06-04 12:34:19,375 | INFO     | collected zombie processes
[2025-06-04 14:54:10] 2025-06-04 12:34:19,375 | INFO     | will attempt to kill all subprocesses of pid=3807
[2025-06-04 14:54:10] 2025-06-04 12:34:19,529 | INFO     | process IDs to be killed: [3807] (in reverse order)
[2025-06-04 14:54:10] 2025-06-04 12:34:20,354 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:54:10] 2025-06-04 12:34:20,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:54:10] 2025-06-04 12:34:20,359 | INFO     | did not find any defunct processes belonging to 3807
[2025-06-04 14:54:10] 2025-06-04 12:34:20,362 | INFO     | did not find any defunct processes belonging to 3807
[2025-06-04 14:54:10] 2025-06-04 12:34:20,363 | INFO     | ready for new job
[2025-06-04 14:54:10] 2025-06-04 12:34:20,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:54:10] 2025-06-04 12:34:20,365 | INFO     | **************************************
[2025-06-04 14:54:10] 2025-06-04 12:34:20,365 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:54:10] 2025-06-04 12:34:20,365 | INFO     | **************************************
[2025-06-04 14:54:10] 2025-06-04 12:34:20,365 | INFO     | 
[2025-06-04 14:54:10] 2025-06-04 12:34:20,366 | INFO     | pilot is running in a VM
[2025-06-04 14:54:10] 2025-06-04 12:34:20,366 | INFO     | architecture information:
[2025-06-04 14:54:10] 2025-06-04 12:34:20,372 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:54:10] 2025-06-04 12:34:20,549 | INFO     | cat /etc/os-release:
[2025-06-04 14:54:10] NAME="CentOS Linux"
[2025-06-04 14:54:10] VERSION="7 (Core)"
[2025-06-04 14:54:10] ID="centos"
[2025-06-04 14:54:10] ID_LIKE="rhel fedora"
[2025-06-04 14:54:10] VERSION_ID="7"
[2025-06-04 14:54:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:54:10] ANSI_COLOR="0;31"
[2025-06-04 14:54:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:54:10] HOME_URL="https://www.centos.org/"
[2025-06-04 14:54:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:54:10] 
[2025-06-04 14:54:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:54:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:54:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:54:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:54:10] 
[2025-06-04 14:54:10] 2025-06-04 12:34:20,550 | INFO     | **************************************
[2025-06-04 14:54:10] 2025-06-04 12:34:21,054 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-04 14:54:10] 2025-06-04 12:34:21,234 | INFO     | sufficient remaining disk space (496389586944 B)
[2025-06-04 14:54:10] 2025-06-04 12:34:21,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:54:10] 2025-06-04 12:34:21,235 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:54:10] 2025-06-04 12:34:21,235 | INFO     | update_server=False
[2025-06-04 14:54:10] 2025-06-04 12:34:21,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:54:10] 2025-06-04 12:34:21,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:54:10] 2025-06-04 12:34:21,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:54:10] 2025-06-04 12:34:21,241 | INFO     | aborting loop
[2025-06-04 14:54:10] 2025-06-04 12:34:21,575 | INFO     | all data control threads have been joined
[2025-06-04 14:54:10] 2025-06-04 12:34:21,719 | INFO     | PID=25626 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 14:54:10] 2025-06-04 12:34:21,719 | INFO     | .. there are 9 such processes running
[2025-06-04 14:54:10] 2025-06-04 12:34:21,719 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:54:10] 2025-06-04 12:34:21,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:54:10] 2025-06-04 12:34:21,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:54:10] 2025-06-04 12:34:22,242 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:22,247 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:22,313 | INFO     | all job control threads have been joined
[2025-06-04 14:54:10] 2025-06-04 12:34:22,542 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:22,563 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:22,581 | INFO     | [data] control thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:22,622 | INFO     | all payload control threads have been joined
[2025-06-04 14:54:10] 2025-06-04 12:34:22,716 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:22,921 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:23,139 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:23,175 | INFO     | [job] validate thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:23,244 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:23,320 | INFO     | [job] control thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:23,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:54:10] 2025-06-04 12:34:23,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:54:10] 2025-06-04 12:34:23,605 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:23,629 | INFO     | [payload] control thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:24,353 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:27,605 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:31,290 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:54:10] 2025-06-04 12:34:32,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:54:10] 2025-06-04 12:34:34,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528783464256)>', '<ExcThread(monitor, started 140528335169280)>']
[2025-06-04 14:54:10] 2025-06-04 12:34:34,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:54:10] 2025-06-04 12:34:34,797 | INFO     | [monitor] control thread has ended
[2025-06-04 14:54:10] 2025-06-04 12:34:39,123 | INFO     | all workflow threads have been joined
[2025-06-04 14:54:10] 2025-06-04 12:34:39,123 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:54:10] 2025-06-04 12:34:39,123 | INFO     | traces error code: 0
[2025-06-04 14:54:10] 2025-06-04 12:34:39,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:54:10] 2025-06-04 12:34:39,459 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:54:10] 2025-06-04 12:34:39,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:54:10] 2025-06-04 12:34:39,588 [wrapper] pilotpid: 25626
[2025-06-04 14:54:10] 2025-06-04 12:34:39,629 [wrapper] Pilot exit status: 0
[2025-06-04 14:54:10] 2025-06-04 12:34:39,688 [wrapper] pandaids: 6678015307
[2025-06-04 14:54:10] 2025-06-04 12:34:40,901 [wrapper] cleanup supervisor_pilot 11461 25627
[2025-06-04 14:54:10] 2025-06-04 12:34:40,985 [wrapper] Test setup, not cleaning
[2025-06-04 14:54:10] 2025-06-04 12:34:41,041 [wrapper] apfmon messages muted
[2025-06-04 14:54:10] 2025-06-04 12:34:41,091 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:54:10] 2025-06-04 12:34:41,185 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:54:10]  *** Error codes and diagnostics ***
[2025-06-04 14:54:10]     "exeErrorCode": 0,
[2025-06-04 14:54:10]     "exeErrorDiag": "",
[2025-06-04 14:54:10]     "pilotErrorCode": 0,
[2025-06-04 14:54:10]     "pilotErrorDiag": "",
[2025-06-04 14:54:10]  *** Listing of results directory ***
[2025-06-04 14:54:10] total 393804
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:04 queuedata.json
[2025-06-04 14:54:10] -rwx------. 1 boinc boinc     37140 Jun  3 22:05 runpilot2-wrapper.sh
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:54:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:31 run_atlas
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:31 job.xml
[2025-06-04 14:54:10] -rw-r--r--. 2 boinc boinc 216163858 Jun  4 10:31 EVNT.45006593._001780.pool.root.1
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc      6391 Jun  4 10:31 init_data.xml
[2025-06-04 14:54:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:31 start_atlas.sh
[2025-06-04 14:54:10] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:31 shared
[2025-06-04 14:54:10] -rw-r--r--. 2 boinc boinc    508881 Jun  4 10:31 input.tar.gz
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:31 boinc_lockfile
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc      2524 Jun  4 10:32 pandaJob.out
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc    986774 Jun  4 10:35 agis_schedconf.cvmfs.json
[2025-06-04 14:54:10] drwx------. 4 boinc boinc      4096 Jun  4 10:35 pilot3
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc 180076053 Jun  4 14:31 HITS.45006595._044424.pool.root.1
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:31 boinc_task_state.xml
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc      1014 Jun  4 14:32 memory_monitor_summary.json
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc   1598969 Jun  4 14:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc    383784 Jun  4 14:32 log.45006595._044424.job.log.tgz.1
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc        95 Jun  4 14:34 pilot_heartbeat.json
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc      7687 Jun  4 14:34 heartbeat.json
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc      4880 Jun  4 14:34 pilotlog.txt
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc   1218260 Jun  4 14:34 log.45006595._044424.job.log.1
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc       357 Jun  4 14:34 output.list
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:34 runtime_log
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc   1617920 Jun  4 14:34 result.tar.gz
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc       656 Jun  4 14:34 ttZNDmw3mg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFqZKDmyKF2Oo.diag
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc      8659 Jun  4 14:34 runtime_log.err
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:54 boinc_mmap_file
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:54 wrapper_checkpoint.txt
[2025-06-04 14:54:10] -rw-r--r--. 1 boinc boinc     20561 Jun  4 14:54 stderr.txt
[2025-06-04 14:54:10] HITS file was successfully produced:
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc 180076053 Jun  4 14:31 shared/HITS.pool.root.1
[2025-06-04 14:54:10]  *** Contents of shared directory: ***
[2025-06-04 14:54:10] total 389052
[2025-06-04 14:54:10] -rw-r--r--. 2 boinc boinc 216163858 Jun  4 10:31 ATLAS.root_0
[2025-06-04 14:54:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:31 start_atlas.sh
[2025-06-04 14:54:10] -rw-r--r--. 2 boinc boinc    508881 Jun  4 10:31 input.tar.gz
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc 180076053 Jun  4 14:31 HITS.pool.root.1
[2025-06-04 14:54:10] -rw-------. 1 boinc boinc   1617920 Jun  4 14:34 result.tar.gz
14:54:12 (21912): run_atlas exited; CPU time 51230.306104
14:54:12 (21912): called boinc_finish(0)

</stderr_txt>
]]>

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