Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:38:09 (1094050): wrapper (7.7.26015): starting
20:38:09 (1094050): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 20:38:10] Arguments: --nthreads 12
[2025-06-03 20:38:10] Threads: 12
[2025-06-03 20:38:10] Checking for CVMFS
[2025-06-03 20:38:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:38:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:38:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:38:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:38:10] 2.12.6.0 5533 30794 469392 146762 2 102 21463198 32935937 3783 16776704 1 126876626 99.627 117272328 31745 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 20:38:10] CVMFS is ok
[2025-06-03 20:38:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:38:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:38:10] Further information can be found at the LHC@home message board.
[2025-06-03 20:38:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:38:10] Checking for apptainer binary...
[2025-06-03 20:38:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:38:10] Running /usr/bin/apptainer --version
[2025-06-03 20:38:10] apptainer version 1.4.1-1.el9
[2025-06-03 20:38:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:38:10] c6-2-29-3.aglt2.org
[2025-06-03 20:38:10] apptainer works
[2025-06-03 20:38:10] Set ATHENA_PROC_NUMBER=12
[2025-06-03 20:38:10] Set ATHENA_CORE_NUMBER=12
[2025-06-03 20:38:11] Starting ATLAS job with PandaID=6678014620
[2025-06-03 20:38:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:17:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:17:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 21:17:13]  is_altstaged=None
[2025-06-03 21:17:13]  is_tar=False
[2025-06-03 21:17:13]  lfn=log.45006595._044223.job.log.tgz.1
[2025-06-03 21:17:13]  mtime=0
[2025-06-03 21:17:13]  protocol_id=None
[2025-06-03 21:17:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 21:17:13]  replicas=None
[2025-06-03 21:17:13]  scope=mc23_13p6TeV
[2025-06-03 21:17:13]  status=None
[2025-06-03 21:17:13]  status_code=0
[2025-06-03 21:17:13]  storage_token=
[2025-06-03 21:17:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678014620/log.45006595._044223.job.log.tgz.1
[2025-06-03 21:17:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/77/log.45006595._044223.job.log.tgz.1
[2025-06-03 21:17:13]  workdir=None
[2025-06-03 21:17:13] ]
[2025-06-03 21:17:13] 2025-06-04 01:16:47,148 | INFO     | transferring file log.45006595._044223.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678014620/log.45006595._044223.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:17:13] 2025-06-04 01:16:47,149 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678014620/log.45006595._044223.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._044223.job
[2025-06-03 21:17:13] 2025-06-04 01:16:47,163 | INFO     | adding to output.list: log.45006595._044223.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/77/log.45006595._044223.job.log.tg
[2025-06-03 21:17:13] 2025-06-04 01:16:47,163 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:17:13] 2025-06-04 01:16:47,163 | INFO     | summary of transferred files:
[2025-06-03 21:17:13] 2025-06-04 01:16:47,163 | INFO     |  -- lfn=log.45006595._044223.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:17:13] 2025-06-04 01:16:47,164 | INFO     | stage-out finished correctly
[2025-06-03 21:17:13] 2025-06-04 01:16:47,210 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:17:13] 2025-06-04 01:16:48,622 | INFO     | job 6678014620 has state=finished
[2025-06-03 21:17:13] 2025-06-04 01:16:48,622 | INFO     | preparing for final server update for job 6678014620 in state='finished'
[2025-06-03 21:17:13] 2025-06-04 01:16:48,623 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:17:13] 2025-06-04 01:16:48,624 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:17:13] 2025-06-04 01:16:48,624 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:17:13] 2025-06-04 01:16:48,624 | INFO     | job 6678014620 has finished - writing final server update
[2025-06-03 21:17:13] 2025-06-04 01:16:48,625 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:17:13] 2025-06-04 01:16:48,642 | INFO     | executing command: lscpu
[2025-06-03 21:17:13] 2025-06-04 01:16:48,715 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:17:13] 2025-06-04 01:16:48,916 | INFO     | monitor loop #179: job 0:6678014620 is in state 'finished'
[2025-06-03 21:17:13] 2025-06-04 01:16:48,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:17:13] 2025-06-04 01:16:51,420 | INFO     | monitor loop #180: job 0:6678014620 is in state 'finished'
[2025-06-03 21:17:13] 2025-06-04 01:16:51,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:17:13] 2025-06-04 01:16:53,224 | INFO     | 2312s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 21:17:13] 2025-06-04 01:16:53,830 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 21:17:13] 2025-06-04 01:16:53,831 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678014620/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:17:13] 2025-06-04 01:16:53,832 | INFO     | extracted standard info from prmon json
[2025-06-03 21:17:13] 2025-06-04 01:16:53,832 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:17:13] 2025-06-04 01:16:53,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:17:13] 2025-06-04 01:16:53,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:17:13] 2025-06-04 01:16:53,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:17:13] 2025-06-04 01:16:53,836 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:17:13] 2025-06-04 01:16:53,836 | INFO     | sum of square deviations: 9228080.0
[2025-06-03 21:17:13] 2025-06-04 01:16:53,836 | INFO     | sum of deviations: 4589429428.0
[2025-06-03 21:17:13] 2025-06-04 01:16:53,836 | INFO     | mean x: 1748998753.0
[2025-06-03 21:17:13] 2025-06-04 01:16:53,836 | INFO     | mean y: 2655827.419354839
[2025-06-03 21:17:13] 2025-06-04 01:16:53,836 | INFO     | -- intersect: -869832276959.6289
[2025-06-03 21:17:13] 2025-06-04 01:16:53,837 | INFO     | intersect: -869832276959.6289
[2025-06-03 21:17:13] 2025-06-04 01:16:53,837 | INFO     | chi2: 0.7168387760759163
[2025-06-03 21:17:13] 2025-06-04 01:16:53,837 | INFO     | -- intersect: -869832276959.6289
[2025-06-03 21:17:13] 2025-06-04 01:16:53,837 | INFO     | current memory leak: 497.33 B/s (using 31 data points, chi2=0.72)
[2025-06-03 21:17:13] 2025-06-04 01:16:53,838 | INFO     | ..............................
[2025-06-03 21:17:13] 2025-06-04 01:16:53,838 | INFO     | . Timing measurements:
[2025-06-03 21:17:13] 2025-06-04 01:16:53,838 | INFO     | . get job = 0 s
[2025-06-03 21:17:13] 2025-06-04 01:16:53,838 | INFO     | . initial setup = 2 s
[2025-06-03 21:17:13] 2025-06-04 01:16:53,838 | INFO     | . payload setup = 8 s
[2025-06-03 21:17:13] 2025-06-04 01:16:53,838 | INFO     | . stage-in = 0 s
[2025-06-03 21:17:13] 2025-06-04 01:16:53,838 | INFO     | . payload execution = 2273 s
[2025-06-03 21:17:13] 2025-06-04 01:16:53,838 | INFO     | . stage-out = 0 s
[2025-06-03 21:17:13] 2025-06-04 01:16:53,838 | INFO     | . log creation = 0 s
[2025-06-03 21:17:13] 2025-06-04 01:16:53,839 | INFO     | ..............................
[2025-06-03 21:17:13] 2025-06-04 01:16:54,240 | INFO     | 
[2025-06-03 21:17:13] 2025-06-04 01:16:54,240 | INFO     | job summary report
[2025-06-03 21:17:13] 2025-06-04 01:16:54,240 | INFO     | --------------------------------------------------
[2025-06-03 21:17:13] 2025-06-04 01:16:54,240 | INFO     | PanDA job id: 6678014620
[2025-06-03 21:17:13] 2025-06-04 01:16:54,240 | INFO     | task id: 45006595
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | errors: (none)
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | pilot state: finished 
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | transexitcode: 0
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | exeerrorcode: 0
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | exeerrordiag: 
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | exitcode: 0
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | exitmsg: OK
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | cpuconsumptiontime: 20330 s
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | nevents: 400
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | neventsw: 0
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | pid: 1104591
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | pgrp: 1104591
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | corecount: 12
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | event service: False
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | sizes: {0: 2404356, 1: 2405212, 6: 2405418, 11: 2405446, 2285: 2430338, 2287: 2439463, 2294: 2439577}
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | --------------------------------------------------
[2025-06-03 21:17:13] 2025-06-04 01:16:54,241 | INFO     | 
[2025-06-03 21:17:13] 2025-06-04 01:16:54,242 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 21:17:13] 2025-06-04 01:16:54,264 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,265 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,265 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,265 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,266 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,266 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:17:13] 2025-06-04 01:16:54,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:17:13] 2025-06-04 01:16:54,268 | INFO     | job 6678014620 has completed (purged errors)
[2025-06-03 21:17:13] 2025-06-04 01:16:54,268 | INFO     | overall cleanup function is called
[2025-06-03 21:17:13] 2025-06-04 01:16:55,277 | INFO     | --- collectZombieJob: --- 10, [1104591]
[2025-06-03 21:17:13] 2025-06-04 01:16:55,278 | INFO     | zombie collector waiting for pid 1104591
[2025-06-03 21:17:13] 2025-06-04 01:16:55,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:17:13] 2025-06-04 01:16:55,278 | INFO     | collected zombie processes
[2025-06-03 21:17:13] 2025-06-04 01:16:55,278 | INFO     | will attempt to kill all subprocesses of pid=1104591
[2025-06-03 21:17:13] 2025-06-04 01:16:55,407 | INFO     | process IDs to be killed: [1104591] (in reverse order)
[2025-06-03 21:17:13] 2025-06-04 01:16:55,460 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:17:13] 2025-06-04 01:16:55,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:17:13] 2025-06-04 01:16:55,472 | INFO     | did not find any defunct processes belonging to 1104591
[2025-06-03 21:17:13] 2025-06-04 01:16:55,478 | INFO     | did not find any defunct processes belonging to 1104591
[2025-06-03 21:17:13] 2025-06-04 01:16:55,479 | INFO     | ready for new job
[2025-06-03 21:17:13] 2025-06-04 01:16:55,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:17:13] 2025-06-04 01:16:55,480 | INFO     | **************************************
[2025-06-03 21:17:13] 2025-06-04 01:16:55,480 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:17:13] 2025-06-04 01:16:55,480 | INFO     | **************************************
[2025-06-03 21:17:13] 2025-06-04 01:16:55,480 | INFO     | 
[2025-06-03 21:17:13] 2025-06-04 01:16:55,494 | INFO     | architecture information:
[2025-06-03 21:17:13] 2025-06-04 01:16:55,494 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:17:13] 2025-06-04 01:16:55,511 | INFO     | cat /etc/os-release:
[2025-06-03 21:17:13] NAME="CentOS Linux"
[2025-06-03 21:17:13] VERSION="7 (Core)"
[2025-06-03 21:17:13] ID="centos"
[2025-06-03 21:17:13] ID_LIKE="rhel fedora"
[2025-06-03 21:17:13] VERSION_ID="7"
[2025-06-03 21:17:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:17:13] ANSI_COLOR="0;31"
[2025-06-03 21:17:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:17:13] HOME_URL="https://www.centos.org/"
[2025-06-03 21:17:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:17:13] 
[2025-06-03 21:17:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:17:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:17:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:17:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:17:13] 
[2025-06-03 21:17:13] 2025-06-04 01:16:55,511 | INFO     | **************************************
[2025-06-03 21:17:13] 2025-06-04 01:16:56,014 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 21:17:13] 2025-06-04 01:16:56,034 | INFO     | sufficient remaining disk space (76374081536 B)
[2025-06-03 21:17:13] 2025-06-04 01:16:56,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:17:13] 2025-06-04 01:16:56,035 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:17:13] 2025-06-04 01:16:56,035 | INFO     | update_server=False
[2025-06-03 21:17:13] 2025-06-04 01:16:56,035 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:17:13] 2025-06-04 01:16:56,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:17:13] 2025-06-04 01:16:56,233 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:17:13] 2025-06-04 01:16:56,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:17:13] 2025-06-04 01:16:56,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:17:13] 2025-06-04 01:16:56,427 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 21:17:13] 2025-06-04 01:16:56,427 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 21:17:13] 2025-06-04 01:16:56,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:17:13] 2025-06-04 01:16:56,428 | INFO     | will abort loop
[2025-06-03 21:17:13] 2025-06-04 01:16:56,635 | INFO     | all data control threads have been joined
[2025-06-03 21:17:13] 2025-06-04 01:16:57,040 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:57,149 | INFO     | all payload control threads have been joined
[2025-06-03 21:17:13] 2025-06-04 01:16:57,359 | INFO     | all job control threads have been joined
[2025-06-03 21:17:13] 2025-06-04 01:16:57,433 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:57,512 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:57,641 | INFO     | [data] control thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:57,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:17:13] 2025-06-04 01:16:58,041 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:58,155 | INFO     | [payload] control thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:58,177 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:58,179 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:58,283 | INFO     | [job] validate thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:58,365 | INFO     | [job] control thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:58,385 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:58,528 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:58,614 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:16:58,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:17:13] 2025-06-04 01:16:59,906 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:17:01,780 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:17:06,762 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:17:13] 2025-06-04 01:17:07,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:17:13] 2025-06-04 01:17:08,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660178270016)>', '<ExcThread(monitor, started 139659678033664)>']
[2025-06-03 21:17:13] 2025-06-04 01:17:09,296 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:17:13] 2025-06-04 01:17:09,296 | INFO     | [monitor] control thread has ended
[2025-06-03 21:17:13] 2025-06-04 01:17:13,434 | INFO     | all workflow threads have been joined
[2025-06-03 21:17:13] 2025-06-04 01:17:13,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:17:13] 2025-06-04 01:17:13,435 | INFO     | traces error code: 0
[2025-06-03 21:17:13] 2025-06-04 01:17:13,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:17:13] 2025-06-04 01:17:13,529 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:17:13] 2025-06-04 01:17:13,533 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:17:13] 2025-06-04 01:17:13,537 [wrapper] pilotpid: 1097687
[2025-06-03 21:17:13] 2025-06-04 01:17:13,542 [wrapper] Pilot exit status: 0
[2025-06-03 21:17:13] 2025-06-04 01:17:13,558 [wrapper] pandaids: 6678014620
[2025-06-03 21:17:13] 2025-06-04 01:17:13,608 [wrapper] cleanup supervisor_pilot 1194501 1097688
[2025-06-03 21:17:13] 2025-06-04 01:17:13,613 [wrapper] Test setup, not cleaning
[2025-06-03 21:17:13] 2025-06-04 01:17:13,617 [wrapper] apfmon messages muted
[2025-06-03 21:17:13] 2025-06-04 01:17:13,620 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:17:13] 2025-06-04 01:17:13,624 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:17:13]  *** Error codes and diagnostics ***
[2025-06-03 21:17:13]     "exeErrorCode": 0,
[2025-06-03 21:17:13]     "exeErrorDiag": "",
[2025-06-03 21:17:13]     "pilotErrorCode": 0,
[2025-06-03 21:17:13]     "pilotErrorDiag": "",
[2025-06-03 21:17:13]  *** Listing of results directory ***
[2025-06-03 21:17:13] total 391756
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 15:41 pilot3.tar.gz
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:57 queuedata.json
[2025-06-03 21:17:13] -rwx------. 1 boincer umatlas     37140 Jun  3 15:58 runpilot2-wrapper.sh
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas       100 Jun  3 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:17:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 20:38 run_atlas
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas       105 Jun  3 20:38 job.xml
[2025-06-03 21:17:13] -rw-r--r--. 2 boincer umatlas 216474898 Jun  3 20:38 EVNT.45006593._001772.pool.root.1
[2025-06-03 21:17:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:38 start_atlas.sh
[2025-06-03 21:17:13] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 20:38 shared
[2025-06-03 21:17:13] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 20:38 input.tar.gz
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas         0 Jun  3 20:38 boinc_lockfile
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 20:38 pandaJob.out
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas    986069 Jun  3 20:38 agis_schedconf.cvmfs.json
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas   1603667 Jun  3 20:38 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:17:13] drwx------. 4 boincer umatlas      4096 Jun  3 20:38 pilot3
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas      6842 Jun  3 21:13 init_data.xml
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas 179665748 Jun  3 21:16 HITS.45006595._044223.pool.root.1
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas       529 Jun  3 21:16 boinc_task_state.xml
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas      1028 Jun  3 21:16 memory_monitor_summary.json
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas    335089 Jun  3 21:16 log.45006595._044223.job.log.tgz.1
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:16 boinc_mmap_file
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas        27 Jun  3 21:16 wrapper_checkpoint.txt
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas        95 Jun  3 21:16 pilot_heartbeat.json
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas      7707 Jun  3 21:16 heartbeat.json
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas      4611 Jun  3 21:17 pilotlog.txt
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas    256979 Jun  3 21:17 log.45006595._044223.job.log.1
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas       357 Jun  3 21:17 output.list
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:17 runtime_log
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas    614400 Jun  3 21:17 result.tar.gz
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas      8666 Jun  3 21:17 runtime_log.err
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas       651 Jun  3 21:17 rQYLDmQxmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmboZKDmXkrYLm.diag
[2025-06-03 21:17:13] -rw-r--r--. 1 boincer umatlas     21326 Jun  3 21:17 stderr.txt
[2025-06-03 21:17:13] HITS file was successfully produced:
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas 179665748 Jun  3 21:16 shared/HITS.pool.root.1
[2025-06-03 21:17:13]  *** Contents of shared directory: ***
[2025-06-03 21:17:13] total 387980
[2025-06-03 21:17:13] -rw-r--r--. 2 boincer umatlas 216474898 Jun  3 20:38 ATLAS.root_0
[2025-06-03 21:17:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:38 start_atlas.sh
[2025-06-03 21:17:13] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 20:38 input.tar.gz
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas 179665748 Jun  3 21:16 HITS.pool.root.1
[2025-06-03 21:17:13] -rw-------. 1 boincer umatlas    614400 Jun  3 21:17 result.tar.gz
21:17:15 (1094050): run_atlas exited; CPU time 20348.985857
21:17:15 (1094050): called boinc_finish(0)

</stderr_txt>
]]>

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