Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:51:21 (2361234): wrapper (7.7.26015): starting
17:51:21 (2361234): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 17:51:21] Arguments: --nthreads 4
[2025-06-05 17:51:21] Threads: 4
[2025-06-05 17:51:21] Checking for CVMFS
[2025-06-05 17:51:21] No cvmfs_config command found, will try listing directly
[2025-06-05 17:51:21] CVMFS is ok
[2025-06-05 17:51:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 17:51:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 17:51:22] Further information can be found at the LHC@home message board.
[2025-06-05 17:51:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:51:22] Checking for apptainer binary...
[2025-06-05 17:51:22] which: no apptainer in ((null))
[2025-06-05 17:51:22] apptainer is not installed, using version from CVMFS
[2025-06-05 17:51:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:51:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-06-05 17:51:22] apptainer works
[2025-06-05 17:51:22] Set ATHENA_PROC_NUMBER=4
[2025-06-05 17:51:22] Set ATHENA_CORE_NUMBER=4
[2025-06-05 17:51:22] Starting ATLAS job with PandaID=6677978530
[2025-06-05 17:51:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 20:28:39]  *** The last 200 lines of the pilot log: ***
[2025-06-05 20:28:39] 2025-06-05 18:28:20,414 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 20:28:39] 2025-06-05 18:28:20,670 | INFO     | monitor loop #687: job 0:6677978530 is in state 'finished'
[2025-06-05 20:28:39] 2025-06-05 18:28:20,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:28:39] 2025-06-05 18:28:23,173 | INFO     | monitor loop #688: job 0:6677978530 is in state 'finished'
[2025-06-05 20:28:39] 2025-06-05 18:28:23,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:28:39] 2025-06-05 18:28:24,015 | INFO     | PID=2364918 has CPU usage=16.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 20:28:39] 2025-06-05 18:28:24,015 | INFO     | .. there are 5 such processes running
[2025-06-05 20:28:39] 2025-06-05 18:28:24,562 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 20:28:39] 2025-06-05 18:28:24,563 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6677978530/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 20:28:39] 2025-06-05 18:28:24,564 | INFO     | extracted standard info from prmon json
[2025-06-05 20:28:39] 2025-06-05 18:28:24,564 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 20:28:39] 2025-06-05 18:28:24,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 20:28:39] 2025-06-05 18:28:24,564 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 20:28:39] 2025-06-05 18:28:24,564 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 20:28:39] 2025-06-05 18:28:24,568 | INFO     | fitting pss+swap vs Time
[2025-06-05 20:28:39] 2025-06-05 18:28:24,568 | INFO     | sum of square deviations: 1132458442.5
[2025-06-05 20:28:39] 2025-06-05 18:28:24,569 | INFO     | sum of deviations: 13981285338.999996
[2025-06-05 20:28:39] 2025-06-05 18:28:24,569 | INFO     | mean x: 1749143385.5
[2025-06-05 20:28:39] 2025-06-05 18:28:24,569 | INFO     | mean y: 2314638.064935065
[2025-06-05 20:28:39] 2025-06-05 18:28:24,569 | INFO     | -- intersect: -21592537635.28899
[2025-06-05 20:28:39] 2025-06-05 18:28:24,569 | INFO     | intersect: -21592537635.28899
[2025-06-05 20:28:39] 2025-06-05 18:28:24,570 | INFO     | chi2: 1.699105122776447
[2025-06-05 20:28:39] 2025-06-05 18:28:24,570 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,571 | INFO     | sum of deviations: 13420252235.000011
[2025-06-05 20:28:39] 2025-06-05 18:28:24,571 | INFO     | mean x: 1749143233.0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,571 | INFO     | mean y: 2313836.77852349
[2025-06-05 20:28:39] 2025-06-05 18:28:24,571 | INFO     | -- intersect: -22883606712.698795
[2025-06-05 20:28:39] 2025-06-05 18:28:24,571 | INFO     | intersect: -22883606712.698795
[2025-06-05 20:28:39] 2025-06-05 18:28:24,571 | INFO     | chi2: 1.7010976395074315
[2025-06-05 20:28:39] 2025-06-05 18:28:24,571 | INFO     | current chi2=1.7010976395074315 (change=-0.11726859652618427 %)
[2025-06-05 20:28:39] 2025-06-05 18:28:24,572 | INFO     | right removable region: 148
[2025-06-05 20:28:39] 2025-06-05 18:28:24,572 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,573 | INFO     | sum of deviations: -10666005794.0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,573 | INFO     | mean x: 1749143538.0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,573 | INFO     | mean y: 2349386.6845637583
[2025-06-05 20:28:39] 2025-06-05 18:28:24,573 | INFO     | -- intersect: 18191381863.239
[2025-06-05 20:28:39] 2025-06-05 18:28:24,573 | INFO     | intersect: 18191381863.239
[2025-06-05 20:28:39] 2025-06-05 18:28:24,573 | INFO     | chi2: 0.02792512034127258
[2025-06-05 20:28:39] 2025-06-05 18:28:24,573 | INFO     | current chi2=0.02792512034127258 (change=98.35648071641141 %)
[2025-06-05 20:28:39] 2025-06-05 18:28:24,574 | INFO     | sum of square deviations: 925859220.0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,574 | INFO     | sum of deviations: -8888700156.0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,574 | INFO     | mean x: 1749143690.5
[2025-06-05 20:28:39] 2025-06-05 18:28:24,575 | INFO     | mean y: 2346665.777777778
[2025-06-05 20:28:39] 2025-06-05 18:28:24,575 | INFO     | -- intersect: 16794979345.521212
[2025-06-05 20:28:39] 2025-06-05 18:28:24,575 | INFO     | intersect: 16794979345.521212
[2025-06-05 20:28:39] 2025-06-05 18:28:24,575 | INFO     | chi2: 0.026557570892756944
[2025-06-05 20:28:39] 2025-06-05 18:28:24,575 | INFO     | current chi2=0.026557570892756944 (change=4.897201629940464 %)
[2025-06-05 20:28:39] 2025-06-05 18:28:24,575 | INFO     | left removable region: 20
[2025-06-05 20:28:39] 2025-06-05 18:28:24,576 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,576 | INFO     | sum of deviations: -4574390518.5
[2025-06-05 20:28:39] 2025-06-05 18:28:24,576 | INFO     | mean x: 1749143812.5
[2025-06-05 20:28:39] 2025-06-05 18:28:24,576 | INFO     | mean y: 2339420.2890625
[2025-06-05 20:28:39] 2025-06-05 18:28:24,576 | INFO     | -- intersect: 12307206623.863121
[2025-06-05 20:28:39] 2025-06-05 18:28:24,577 | INFO     | intersect: 12307206623.863121
[2025-06-05 20:28:39] 2025-06-05 18:28:24,577 | INFO     | chi2: 0.0177285205009508
[2025-06-05 20:28:39] 2025-06-05 18:28:24,577 | INFO     | -- intersect: 12307206623.863121
[2025-06-05 20:28:39] 2025-06-05 18:28:24,577 | INFO     | current memory leak: -7.03 B/s (using 128 data points, chi2=0.02)
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | ..............................
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | . Timing measurements:
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | . get job = 0 s
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | . initial setup = 1 s
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | . payload setup = 7 s
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | . stage-in = 0 s
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | . payload execution = 9378 s
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | . stage-out = 1 s
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | . log creation = 0 s
[2025-06-05 20:28:39] 2025-06-05 18:28:24,578 | INFO     | ..............................
[2025-06-05 20:28:39] 2025-06-05 18:28:24,678 | INFO     | 
[2025-06-05 20:28:39] 2025-06-05 18:28:24,678 | INFO     | job summary report
[2025-06-05 20:28:39] 2025-06-05 18:28:24,678 | INFO     | --------------------------------------------------
[2025-06-05 20:28:39] 2025-06-05 18:28:24,678 | INFO     | PanDA job id: 6677978530
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | task id: 45006595
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | errors: (none)
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | pilot state: finished 
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | transexitcode: 0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | exeerrorcode: 0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | exeerrordiag: 
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | exitcode: 0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | exitmsg: OK
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | cpuconsumptiontime: 35985 s
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | nevents: 400
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | neventsw: 0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,679 | INFO     | pid: 2371945
[2025-06-05 20:28:39] 2025-06-05 18:28:24,680 | INFO     | pgrp: 2371945
[2025-06-05 20:28:39] 2025-06-05 18:28:24,680 | INFO     | corecount: 4
[2025-06-05 20:28:39] 2025-06-05 18:28:24,680 | INFO     | event service: False
[2025-06-05 20:28:39] 2025-06-05 18:28:24,680 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 11: 2397643, 9389: 2425764, 9390: 2434911, 9397: 2435025}
[2025-06-05 20:28:39] 2025-06-05 18:28:24,680 | INFO     | --------------------------------------------------
[2025-06-05 20:28:39] 2025-06-05 18:28:24,680 | INFO     | 
[2025-06-05 20:28:39] 2025-06-05 18:28:24,680 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-06-05 20:28:39] 2025-06-05 18:28:24,701 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,701 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,701 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,701 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,703 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 20:28:39] 2025-06-05 18:28:24,703 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,703 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 20:28:39] 2025-06-05 18:28:24,703 | INFO     | job 6677978530 has completed (purged errors)
[2025-06-05 20:28:39] 2025-06-05 18:28:24,703 | INFO     | overall cleanup function is called
[2025-06-05 20:28:39] 2025-06-05 18:28:25,711 | INFO     | --- collectZombieJob: --- 10, [2371945]
[2025-06-05 20:28:39] 2025-06-05 18:28:25,711 | INFO     | zombie collector waiting for pid 2371945
[2025-06-05 20:28:39] 2025-06-05 18:28:25,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 20:28:39] 2025-06-05 18:28:25,711 | INFO     | collected zombie processes
[2025-06-05 20:28:39] 2025-06-05 18:28:25,711 | INFO     | will attempt to kill all subprocesses of pid=2371945
[2025-06-05 20:28:39] 2025-06-05 18:28:26,053 | INFO     | process IDs to be killed: [2371945] (in reverse order)
[2025-06-05 20:28:39] 2025-06-05 18:28:26,151 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 20:28:39] 2025-06-05 18:28:26,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 20:28:39] 2025-06-05 18:28:26,164 | INFO     | did not find any defunct processes belonging to 2371945
[2025-06-05 20:28:39] 2025-06-05 18:28:26,175 | INFO     | did not find any defunct processes belonging to 2371945
[2025-06-05 20:28:39] 2025-06-05 18:28:26,176 | INFO     | ready for new job
[2025-06-05 20:28:39] 2025-06-05 18:28:26,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 20:28:39] 2025-06-05 18:28:26,178 | INFO     | **************************************
[2025-06-05 20:28:39] 2025-06-05 18:28:26,178 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 20:28:39] 2025-06-05 18:28:26,178 | INFO     | **************************************
[2025-06-05 20:28:39] 2025-06-05 18:28:26,178 | INFO     | 
[2025-06-05 20:28:39] 2025-06-05 18:28:26,182 | INFO     | architecture information:
[2025-06-05 20:28:39] 2025-06-05 18:28:26,182 | INFO     | executing command: cat /etc/os-release
[2025-06-05 20:28:39] 2025-06-05 18:28:26,196 | INFO     | cat /etc/os-release:
[2025-06-05 20:28:39] NAME="CentOS Linux"
[2025-06-05 20:28:39] VERSION="7 (Core)"
[2025-06-05 20:28:39] ID="centos"
[2025-06-05 20:28:39] ID_LIKE="rhel fedora"
[2025-06-05 20:28:39] VERSION_ID="7"
[2025-06-05 20:28:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 20:28:39] ANSI_COLOR="0;31"
[2025-06-05 20:28:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 20:28:39] HOME_URL="https://www.centos.org/"
[2025-06-05 20:28:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 20:28:39] 
[2025-06-05 20:28:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 20:28:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 20:28:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 20:28:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 20:28:39] 
[2025-06-05 20:28:39] 2025-06-05 18:28:26,197 | INFO     | **************************************
[2025-06-05 20:28:39] 2025-06-05 18:28:26,700 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-06-05 20:28:39] 2025-06-05 18:28:26,718 | INFO     | sufficient remaining disk space (662163161088 B)
[2025-06-05 20:28:39] 2025-06-05 18:28:26,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 20:28:39] 2025-06-05 18:28:26,718 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 20:28:39] 2025-06-05 18:28:26,719 | INFO     | update_server=False
[2025-06-05 20:28:39] 2025-06-05 18:28:26,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 20:28:39] 2025-06-05 18:28:26,719 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 20:28:39] 2025-06-05 18:28:26,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 20:28:39] 2025-06-05 18:28:26,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:28:39] 2025-06-05 18:28:26,720 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 20:28:39] 2025-06-05 18:28:26,721 | INFO     | aborting loop
[2025-06-05 20:28:39] 2025-06-05 18:28:26,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 20:28:39] 2025-06-05 18:28:26,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 20:28:39] 2025-06-05 18:28:26,743 | INFO     | all payload control threads have been joined
[2025-06-05 20:28:39] 2025-06-05 18:28:27,374 | INFO     | all data control threads have been joined
[2025-06-05 20:28:39] 2025-06-05 18:28:27,719 | INFO     | all job control threads have been joined
[2025-06-05 20:28:39] 2025-06-05 18:28:27,724 | INFO     | [job] retrieve thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:27,726 | INFO     | [job] job monitor thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:27,745 | INFO     | [payload] control thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:28,084 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:28,380 | INFO     | [data] control thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:28,441 | INFO     | [payload] failed_post thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:28,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 20:28:39] 2025-06-05 18:28:28,673 | INFO     | [job] validate thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:28,724 | INFO     | [job] control thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:28,726 | INFO     | [data] copytool_out thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:28,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:28,839 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:28,923 | INFO     | [payload] validate_post thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:29,008 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:29,032 | INFO     | [data] copytool_in thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:29,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:28:39] 2025-06-05 18:28:30,694 | INFO     | [job] queue monitor thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:32,632 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 20:28:39] 2025-06-05 18:28:33,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22809666910016)>', '<ExcThread(monitor, started 22809092810496)>']
[2025-06-05 20:28:39] 2025-06-05 18:28:34,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 20:28:39] 2025-06-05 18:28:34,760 | INFO     | [monitor] control thread has ended
[2025-06-05 20:28:39] 2025-06-05 18:28:38,920 | INFO     | all workflow threads have been joined
[2025-06-05 20:28:39] 2025-06-05 18:28:38,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 20:28:39] 2025-06-05 18:28:38,920 | INFO     | traces error code: 0
[2025-06-05 20:28:39] 2025-06-05 18:28:38,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 20:28:39] 2025-06-05 18:28:39,063 [wrapper] ==== pilot stdout END ====
[2025-06-05 20:28:39] 2025-06-05 18:28:39,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 20:28:39] 2025-06-05 18:28:39,068 [wrapper] pilotpid: 2364918
[2025-06-05 20:28:39] 2025-06-05 18:28:39,070 [wrapper] Pilot exit status: 0
[2025-06-05 20:28:39] 2025-06-05 18:28:39,080 [wrapper] pandaids: 6677978530
[2025-06-05 20:28:39] 2025-06-05 18:28:39,149 [wrapper] cleanup supervisor_pilot 2605256 2364919
[2025-06-05 20:28:39] 2025-06-05 18:28:39,152 [wrapper] Test setup, not cleaning
[2025-06-05 20:28:39] 2025-06-05 18:28:39,154 [wrapper] apfmon messages muted
[2025-06-05 20:28:39] 2025-06-05 18:28:39,157 [wrapper] ==== wrapper stdout END ====
[2025-06-05 20:28:39] 2025-06-05 18:28:39,159 [wrapper] ==== wrapper stderr END ====
[2025-06-05 20:28:39]  *** Error codes and diagnostics ***
[2025-06-05 20:28:39]     "exeErrorCode": 0,
[2025-06-05 20:28:39]     "exeErrorDiag": "",
[2025-06-05 20:28:39]     "pilotErrorCode": 0,
[2025-06-05 20:28:39]     "pilotErrorDiag": "",
[2025-06-05 20:28:39]  *** Listing of results directory ***
[2025-06-05 20:28:39] total 392728
[2025-06-05 20:28:39] -rwx------ 1 boinc boinc     37140 Jun  3 21:41 runpilot2-wrapper.sh
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:41 queuedata.json
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc       100 Jun  5 17:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 20:28:39] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 17:51 run_atlas
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc       105 Jun  5 17:51 job.xml
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc      6636 Jun  5 17:51 init_data.xml
[2025-06-05 20:28:39] -rw-r--r-- 2 boinc boinc 218465738 Jun  5 17:51 EVNT.45006593._001762.pool.root.1
[2025-06-05 20:28:39] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:51 start_atlas.sh
[2025-06-05 20:28:39] drwxrwx--x 2 boinc boinc      4096 Jun  5 17:51 shared
[2025-06-05 20:28:39] -rw-r--r-- 2 boinc boinc    508871 Jun  5 17:51 input.tar.gz
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc         0 Jun  5 17:51 boinc_lockfile
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc      2525 Jun  5 17:51 pandaJob.out
[2025-06-05 20:28:39] -rw------- 1 boinc boinc    983229 Jun  5 17:51 agis_schedconf.cvmfs.json
[2025-06-05 20:28:39] -rw------- 1 boinc boinc   1598969 Jun  5 17:51 agis_ddmendpoints.agis.ALL.json
[2025-06-05 20:28:39] drwx------ 4 boinc boinc      4096 Jun  5 17:51 pilot3
[2025-06-05 20:28:39] -rw------- 1 boinc boinc 177451974 Jun  5 20:27 HITS.45006595._043971.pool.root.1
[2025-06-05 20:28:39] -rw------- 1 boinc boinc        95 Jun  5 20:28 pilot_heartbeat.json
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc       529 Jun  5 20:28 boinc_task_state.xml
[2025-06-05 20:28:39] -rw------- 1 boinc boinc      1034 Jun  5 20:28 memory_monitor_summary.json
[2025-06-05 20:28:39] -rw------- 1 boinc boinc    307417 Jun  5 20:28 log.45006595._043971.job.log.tgz.1
[2025-06-05 20:28:39] -rw------- 1 boinc boinc      7723 Jun  5 20:28 heartbeat.json
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc        26 Jun  5 20:28 wrapper_checkpoint.txt
[2025-06-05 20:28:39] -rw------- 1 boinc boinc      4486 Jun  5 20:28 pilotlog.txt
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc      8192 Jun  5 20:28 boinc_mmap_file
[2025-06-05 20:28:39] -rw------- 1 boinc boinc    892413 Jun  5 20:28 log.45006595._043971.job.log.1
[2025-06-05 20:28:39] -rw------- 1 boinc boinc       357 Jun  5 20:28 output.list
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc       620 Jun  5 20:28 runtime_log
[2025-06-05 20:28:39] -rw------- 1 boinc boinc   1218560 Jun  5 20:28 result.tar.gz
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc      9025 Jun  5 20:28 runtime_log.err
[2025-06-05 20:28:39] -rw------- 1 boinc boinc       662 Jun  5 20:28 YDTMDmRhmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTmZKDm9in5Kn.diag
[2025-06-05 20:28:39] -rw-r--r-- 1 boinc boinc     21037 Jun  5 20:28 stderr.txt
[2025-06-05 20:28:39] HITS file was successfully produced:
[2025-06-05 20:28:39] -rw------- 1 boinc boinc 177451974 Jun  5 20:27 shared/HITS.pool.root.1
[2025-06-05 20:28:39]  *** Contents of shared directory: ***
[2025-06-05 20:28:39] total 388360
[2025-06-05 20:28:39] -rw-r--r-- 2 boinc boinc 218465738 Jun  5 17:51 ATLAS.root_0
[2025-06-05 20:28:39] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:51 start_atlas.sh
[2025-06-05 20:28:39] -rw-r--r-- 2 boinc boinc    508871 Jun  5 17:51 input.tar.gz
[2025-06-05 20:28:39] -rw------- 1 boinc boinc 177451974 Jun  5 20:27 HITS.pool.root.1
[2025-06-05 20:28:39] -rw------- 1 boinc boinc   1218560 Jun  5 20:28 result.tar.gz
20:30:50 (2361234): run_atlas exited; CPU time 36342.322890
20:30:50 (2361234): called boinc_finish(0)

</stderr_txt>
]]>

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