Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:46:55 (4783): wrapper (7.7.26015): starting
09:46:55 (4783): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:46:56] Arguments: --nthreads 8
[2025-06-04 09:46:56] Threads: 8
[2025-06-04 09:46:56] Checking for CVMFS
[2025-06-04 09:46:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:46:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:46:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:46:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:46:57] 2.11.2.0 15360 32921 100864 146772 0 60 13092036 25165825 2749 130560 0 17114205 99.778 18979405 2134 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 09:46:57] CVMFS is ok
[2025-06-04 09:46:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:46:57] Checking for apptainer binary...
[2025-06-04 09:46:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:46:57] Running /usr/bin/apptainer --version
[2025-06-04 09:46:57] apptainer version 1.3.2-1.el7
[2025-06-04 09:46:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:47:07] cg-vwn250.simple-grid.lan
[2025-06-04 09:47:07] apptainer works
[2025-06-04 09:47:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:47:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:47:07] Starting ATLAS job with PandaID=6678014769
[2025-06-04 09:47:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:50:35]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:50:35] 2025-06-04 11:49:14,822 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6678014769/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:50:35] 2025-06-04 11:49:14,823 | INFO     | extracted standard info from prmon json
[2025-06-04 13:50:35] 2025-06-04 11:49:14,823 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:50:35] 2025-06-04 11:49:14,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:50:35] 2025-06-04 11:49:14,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:50:35] 2025-06-04 11:49:14,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:50:35] 2025-06-04 11:49:14,829 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:50:35] 2025-06-04 11:49:14,829 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 13:50:35] 2025-06-04 11:49:14,831 | INFO     | sum of deviations: 78171195671.0
[2025-06-04 13:50:35] 2025-06-04 11:49:14,831 | INFO     | mean x: 1749030774.5
[2025-06-04 13:50:35] 2025-06-04 11:49:14,832 | INFO     | mean y: 2426267.7876106193
[2025-06-04 13:50:35] 2025-06-04 11:49:14,832 | INFO     | -- intersect: -38196307540.687195
[2025-06-04 13:50:35] 2025-06-04 11:49:14,832 | INFO     | intersect: -38196307540.687195
[2025-06-04 13:50:35] 2025-06-04 11:49:14,832 | INFO     | chi2: 5.890350711904776
[2025-06-04 13:50:35] 2025-06-04 11:49:14,833 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 13:50:35] 2025-06-04 11:49:14,835 | INFO     | sum of deviations: 90818457614.00002
[2025-06-04 13:50:35] 2025-06-04 11:49:14,835 | INFO     | mean x: 1749030622.0
[2025-06-04 13:50:35] 2025-06-04 11:49:14,835 | INFO     | mean y: 2434393.3167420817
[2025-06-04 13:50:35] 2025-06-04 11:49:14,835 | INFO     | -- intersect: -47457286753.794525
[2025-06-04 13:50:35] 2025-06-04 11:49:14,835 | INFO     | intersect: -47457286753.794525
[2025-06-04 13:50:35] 2025-06-04 11:49:14,836 | INFO     | chi2: 5.1680536176127845
[2025-06-04 13:50:35] 2025-06-04 11:49:14,836 | INFO     | current chi2=5.1680536176127845 (change=12.262378415468245 %)
[2025-06-04 13:50:35] 2025-06-04 11:49:14,836 | INFO     | right removable region: 220
[2025-06-04 13:50:35] 2025-06-04 11:49:14,836 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 13:50:35] 2025-06-04 11:49:14,843 | INFO     | sum of deviations: 2776785941.000004
[2025-06-04 13:50:35] 2025-06-04 11:49:14,844 | INFO     | mean x: 1749030927.0
[2025-06-04 13:50:35] 2025-06-04 11:49:14,844 | INFO     | mean y: 2475689.2760180994
[2025-06-04 13:50:35] 2025-06-04 11:49:14,844 | INFO     | -- intersect: -1448611599.458353
[2025-06-04 13:50:35] 2025-06-04 11:49:14,844 | INFO     | intersect: -1448611599.458353
[2025-06-04 13:50:35] 2025-06-04 11:49:14,844 | INFO     | chi2: 1.4379534265993135
[2025-06-04 13:50:35] 2025-06-04 11:49:14,845 | INFO     | current chi2=1.4379534265993135 (change=75.58798283957664 %)
[2025-06-04 13:50:35] 2025-06-04 11:49:14,845 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 13:50:35] 2025-06-04 11:49:14,847 | INFO     | sum of deviations: -19050967461.999996
[2025-06-04 13:50:35] 2025-06-04 11:49:14,847 | INFO     | mean x: 1749031079.5
[2025-06-04 13:50:35] 2025-06-04 11:49:14,847 | INFO     | mean y: 2490533.175925926
[2025-06-04 13:50:35] 2025-06-04 11:49:14,847 | INFO     | -- intersect: 10665607991.422647
[2025-06-04 13:50:35] 2025-06-04 11:49:14,847 | INFO     | intersect: 10665607991.422647
[2025-06-04 13:50:35] 2025-06-04 11:49:14,848 | INFO     | chi2: 0.8712396296138487
[2025-06-04 13:50:35] 2025-06-04 11:49:14,848 | INFO     | current chi2=0.8712396296138487 (change=39.41113714132689 %)
[2025-06-04 13:50:35] 2025-06-04 11:49:14,848 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 13:50:35] 2025-06-04 11:49:14,850 | INFO     | sum of deviations: -15740615985.0
[2025-06-04 13:50:35] 2025-06-04 11:49:14,850 | INFO     | mean x: 1749031232.0
[2025-06-04 13:50:35] 2025-06-04 11:49:14,851 | INFO     | mean y: 2488113.0995260663
[2025-06-04 13:50:35] 2025-06-04 11:49:14,851 | INFO     | -- intersect: 9454042843.323917
[2025-06-04 13:50:35] 2025-06-04 11:49:14,851 | INFO     | intersect: 9454042843.323917
[2025-06-04 13:50:35] 2025-06-04 11:49:14,851 | INFO     | chi2: 0.8507815949134676
[2025-06-04 13:50:35] 2025-06-04 11:49:14,851 | INFO     | current chi2=0.8507815949134676 (change=2.348152449108464 %)
[2025-06-04 13:50:35] 2025-06-04 11:49:14,851 | INFO     | left removable region: 30
[2025-06-04 13:50:35] 2025-06-04 11:49:14,852 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 13:50:35] 2025-06-04 11:49:14,853 | INFO     | sum of deviations: 4899498832.999999
[2025-06-04 13:50:35] 2025-06-04 11:49:14,853 | INFO     | mean x: 1749031506.5
[2025-06-04 13:50:35] 2025-06-04 11:49:14,854 | INFO     | mean y: 2492875.9789473685
[2025-06-04 13:50:35] 2025-06-04 11:49:14,854 | INFO     | -- intersect: -4026737459.268872
[2025-06-04 13:50:35] 2025-06-04 11:49:14,854 | INFO     | intersect: -4026737459.268872
[2025-06-04 13:50:35] 2025-06-04 11:49:14,854 | INFO     | chi2: 0.0006189743036611326
[2025-06-04 13:50:35] 2025-06-04 11:49:14,854 | INFO     | -- intersect: -4026737459.268872
[2025-06-04 13:50:35] 2025-06-04 11:49:14,855 | INFO     | current memory leak: 2.30 B/s (using 190 data points, chi2=0.00)
[2025-06-04 13:50:35] 2025-06-04 11:49:14,855 | INFO     | ..............................
[2025-06-04 13:50:35] 2025-06-04 11:49:14,855 | INFO     | . Timing measurements:
[2025-06-04 13:50:35] 2025-06-04 11:49:14,856 | INFO     | . get job = 0 s
[2025-06-04 13:50:35] 2025-06-04 11:49:14,856 | INFO     | . initial setup = 6 s
[2025-06-04 13:50:35] 2025-06-04 11:49:14,856 | INFO     | . payload setup = 168 s
[2025-06-04 13:50:35] 2025-06-04 11:49:14,856 | INFO     | . stage-in = 0 s
[2025-06-04 13:50:35] 2025-06-04 11:49:14,856 | INFO     | . payload execution = 13891 s
[2025-06-04 13:50:35] 2025-06-04 11:49:14,856 | INFO     | . stage-out = 4 s
[2025-06-04 13:50:35] 2025-06-04 11:49:14,856 | INFO     | . log creation = 1 s
[2025-06-04 13:50:35] 2025-06-04 11:49:14,856 | INFO     | ..............................
[2025-06-04 13:50:35] 2025-06-04 11:49:15,031 | INFO     | 
[2025-06-04 13:50:35] 2025-06-04 11:49:15,031 | INFO     | job summary report
[2025-06-04 13:50:35] 2025-06-04 11:49:15,031 | INFO     | --------------------------------------------------
[2025-06-04 13:50:35] 2025-06-04 11:49:15,031 | INFO     | PanDA job id: 6678014769
[2025-06-04 13:50:35] 2025-06-04 11:49:15,031 | INFO     | task id: 45006595
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | errors: (none)
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | pilot state: finished 
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | transexitcode: 0
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | exeerrorcode: 0
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | exeerrordiag: 
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | exitcode: 0
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | exitmsg: OK
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | cpuconsumptiontime: 51666 s
[2025-06-04 13:50:35] 2025-06-04 11:49:15,032 | INFO     | nevents: 400
[2025-06-04 13:50:35] 2025-06-04 11:49:15,033 | INFO     | neventsw: 0
[2025-06-04 13:50:35] 2025-06-04 11:49:15,033 | INFO     | pid: 19279
[2025-06-04 13:50:35] 2025-06-04 11:49:15,033 | INFO     | pgrp: 19279
[2025-06-04 13:50:35] 2025-06-04 11:49:15,033 | INFO     | corecount: 8
[2025-06-04 13:50:35] 2025-06-04 11:49:15,033 | INFO     | event service: False
[2025-06-04 13:50:35] 2025-06-04 11:49:15,033 | INFO     | sizes: {0: 2404958, 1: 2405213, 2: 2405213, 12: 2405241, 23: 2405269, 34: 2405297, 44: 2405453, 55: 2405481, 66: 2405509, 77: 2405537, 87: 2405799, 88: 2406107, 14
[2025-06-04 13:50:35] 2025-06-04 11:49:15,033 | INFO     | --------------------------------------------------
[2025-06-04 13:50:35] 2025-06-04 11:49:15,033 | INFO     | 
[2025-06-04 13:50:35] 2025-06-04 11:49:15,033 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-04 13:50:35] 2025-06-04 11:49:15,580 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,581 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,581 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,581 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:50:35] 2025-06-04 11:49:15,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:50:35] 2025-06-04 11:49:15,583 | INFO     | job 6678014769 has completed (purged errors)
[2025-06-04 13:50:35] 2025-06-04 11:49:15,583 | INFO     | overall cleanup function is called
[2025-06-04 13:50:35] 2025-06-04 11:49:16,593 | INFO     | --- collectZombieJob: --- 10, [19279]
[2025-06-04 13:50:35] 2025-06-04 11:49:16,593 | INFO     | zombie collector waiting for pid 19279
[2025-06-04 13:50:35] 2025-06-04 11:49:16,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:50:35] 2025-06-04 11:49:16,593 | INFO     | collected zombie processes
[2025-06-04 13:50:35] 2025-06-04 11:49:16,594 | INFO     | will attempt to kill all subprocesses of pid=19279
[2025-06-04 13:50:35] 2025-06-04 11:49:16,716 | INFO     | process IDs to be killed: [19279] (in reverse order)
[2025-06-04 13:50:35] 2025-06-04 11:49:17,599 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:50:35] 2025-06-04 11:49:17,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:50:35] 2025-06-04 11:49:17,603 | INFO     | did not find any defunct processes belonging to 19279
[2025-06-04 13:50:35] 2025-06-04 11:49:17,607 | INFO     | did not find any defunct processes belonging to 19279
[2025-06-04 13:50:35] 2025-06-04 11:49:17,608 | INFO     | ready for new job
[2025-06-04 13:50:35] 2025-06-04 11:49:17,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:50:35] 2025-06-04 11:49:17,610 | INFO     | **************************************
[2025-06-04 13:50:35] 2025-06-04 11:49:17,610 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:50:35] 2025-06-04 11:49:17,611 | INFO     | **************************************
[2025-06-04 13:50:35] 2025-06-04 11:49:17,611 | INFO     | 
[2025-06-04 13:50:35] 2025-06-04 11:49:17,611 | INFO     | pilot is running in a VM
[2025-06-04 13:50:35] 2025-06-04 11:49:17,611 | INFO     | architecture information:
[2025-06-04 13:50:35] 2025-06-04 11:49:17,612 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:50:35] 2025-06-04 11:49:17,873 | INFO     | cat /etc/os-release:
[2025-06-04 13:50:35] NAME="CentOS Linux"
[2025-06-04 13:50:35] VERSION="7 (Core)"
[2025-06-04 13:50:35] ID="centos"
[2025-06-04 13:50:35] ID_LIKE="rhel fedora"
[2025-06-04 13:50:35] VERSION_ID="7"
[2025-06-04 13:50:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:50:35] ANSI_COLOR="0;31"
[2025-06-04 13:50:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:50:35] HOME_URL="https://www.centos.org/"
[2025-06-04 13:50:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:50:35] 
[2025-06-04 13:50:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:50:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:50:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:50:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:50:35] 
[2025-06-04 13:50:35] 2025-06-04 11:49:17,873 | INFO     | **************************************
[2025-06-04 13:50:35] 2025-06-04 11:49:18,377 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-04 13:50:35] 2025-06-04 11:49:18,548 | INFO     | sufficient remaining disk space (497097375744 B)
[2025-06-04 13:50:35] 2025-06-04 11:49:18,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:50:35] 2025-06-04 11:49:18,548 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:50:35] 2025-06-04 11:49:18,549 | INFO     | update_server=False
[2025-06-04 13:50:35] 2025-06-04 11:49:18,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:50:35] 2025-06-04 11:49:18,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:50:35] 2025-06-04 11:49:18,570 | INFO     | all job control threads have been joined
[2025-06-04 13:50:35] 2025-06-04 11:49:18,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:50:35] 2025-06-04 11:49:18,665 | INFO     | aborting loop
[2025-06-04 13:50:35] 2025-06-04 11:49:18,939 | INFO     | all data control threads have been joined
[2025-06-04 13:50:35] 2025-06-04 11:49:19,177 | INFO     | all payload control threads have been joined
[2025-06-04 13:50:35] 2025-06-04 11:49:19,355 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:50:35] 2025-06-04 11:49:19,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:50:35] 2025-06-04 11:49:19,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:50:35] 2025-06-04 11:49:19,555 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:19,576 | INFO     | [job] control thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:19,671 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:19,742 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:19,769 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:19,806 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:19,887 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:19,945 | INFO     | [data] control thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:20,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:50:35] 2025-06-04 11:49:20,128 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:20,183 | INFO     | [payload] control thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:20,557 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:20,751 | INFO     | [job] validate thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:20,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:21,001 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:21,051 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:21,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:50:35] 2025-06-04 11:49:25,447 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:50:35] 2025-06-04 11:49:25,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518055843648)>', '<ExcThread(monitor, started 140517622929152)>']
[2025-06-04 13:50:35] 2025-06-04 11:49:26,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:50:35] 2025-06-04 11:49:26,397 | INFO     | [monitor] control thread has ended
[2025-06-04 13:50:35] 2025-06-04 11:49:30,544 | INFO     | all workflow threads have been joined
[2025-06-04 13:50:35] 2025-06-04 11:49:30,544 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:50:35] 2025-06-04 11:49:30,544 | INFO     | traces error code: 0
[2025-06-04 13:50:35] 2025-06-04 11:49:30,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:50:35] 2025-06-04 11:49:30,887 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:50:35] 2025-06-04 11:49:30,947 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:50:35] 2025-06-04 11:49:31,032 [wrapper] pilotpid: 10635
[2025-06-04 13:50:35] 2025-06-04 11:49:31,128 [wrapper] Pilot exit status: 0
[2025-06-04 13:50:35] 2025-06-04 11:49:31,573 [wrapper] pandaids: 6678014769
[2025-06-04 13:50:35] 2025-06-04 11:49:32,294 [wrapper] cleanup supervisor_pilot 29815 10636
[2025-06-04 13:50:35] 2025-06-04 11:49:32,357 [wrapper] Test setup, not cleaning
[2025-06-04 13:50:35] 2025-06-04 11:49:32,454 [wrapper] apfmon messages muted
[2025-06-04 13:50:35] 2025-06-04 11:49:32,546 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:50:35] 2025-06-04 11:49:32,638 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:50:35]  *** Error codes and diagnostics ***
[2025-06-04 13:50:35]     "exeErrorCode": 0,
[2025-06-04 13:50:35]     "exeErrorDiag": "",
[2025-06-04 13:50:35]     "pilotErrorCode": 0,
[2025-06-04 13:50:35]     "pilotErrorDiag": "",
[2025-06-04 13:50:35]  *** Listing of results directory ***
[2025-06-04 13:50:35] total 399752
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-04 13:50:35] -rwx------. 1 boinc boinc     37140 Jun  3 22:02 runpilot2-wrapper.sh
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:02 queuedata.json
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc       100 Jun  4 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:50:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 09:46 run_atlas
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc       105 Jun  4 09:46 job.xml
[2025-06-04 13:50:35] -rw-r--r--. 2 boinc boinc 216945017 Jun  4 09:46 EVNT.45006593._001777.pool.root.1
[2025-06-04 13:50:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:46 start_atlas.sh
[2025-06-04 13:50:35] drwxrwx--x. 2 boinc boinc        68 Jun  4 09:46 shared
[2025-06-04 13:50:35] -rw-r--r--. 2 boinc boinc    508873 Jun  4 09:46 input.tar.gz
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc      6393 Jun  4 09:46 init_data.xml
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc         0 Jun  4 09:46 boinc_lockfile
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc      2525 Jun  4 09:47 pandaJob.out
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc    986745 Jun  4 09:50 agis_schedconf.cvmfs.json
[2025-06-04 13:50:35] drwx------. 4 boinc boinc      4096 Jun  4 09:50 pilot3
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc 185322749 Jun  4 13:46 HITS.45006595._044364.pool.root.1
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc       531 Jun  4 13:46 boinc_task_state.xml
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc      1016 Jun  4 13:47 memory_monitor_summary.json
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc   1598969 Jun  4 13:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc    404026 Jun  4 13:47 log.45006595._044364.job.log.tgz.1
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc        95 Jun  4 13:48 pilot_heartbeat.json
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc      7691 Jun  4 13:49 heartbeat.json
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc      4417 Jun  4 13:49 pilotlog.txt
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc   1228731 Jun  4 13:49 log.45006595._044364.job.log.1
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc       357 Jun  4 13:49 output.list
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:49 runtime_log
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc   1648640 Jun  4 13:49 result.tar.gz
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc      8673 Jun  4 13:49 runtime_log.err
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc       656 Jun  4 13:49 QapKDmW1mg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm5pZKDmCHzEsm.diag
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc      8192 Jun  4 13:50 boinc_mmap_file
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc        28 Jun  4 13:50 wrapper_checkpoint.txt
[2025-06-04 13:50:35] -rw-r--r--. 1 boinc boinc     20540 Jun  4 13:50 stderr.txt
[2025-06-04 13:50:35] HITS file was successfully produced:
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc 185322749 Jun  4 13:46 shared/HITS.pool.root.1
[2025-06-04 13:50:35]  *** Contents of shared directory: ***
[2025-06-04 13:50:35] total 394972
[2025-06-04 13:50:35] -rw-r--r--. 2 boinc boinc 216945017 Jun  4 09:46 ATLAS.root_0
[2025-06-04 13:50:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:46 start_atlas.sh
[2025-06-04 13:50:35] -rw-r--r--. 2 boinc boinc    508873 Jun  4 09:46 input.tar.gz
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc 185322749 Jun  4 13:46 HITS.pool.root.1
[2025-06-04 13:50:35] -rw-------. 1 boinc boinc   1648640 Jun  4 13:49 result.tar.gz
13:50:37 (4783): run_atlas exited; CPU time 51859.773654
13:50:37 (4783): called boinc_finish(0)

</stderr_txt>
]]>

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