Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:15:27 (28603): wrapper (7.7.26015): starting
10:15:27 (28603): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:15:27] Arguments: --nthreads 8
[2025-06-04 10:15:27] Threads: 8
[2025-06-04 10:15:27] Checking for CVMFS
[2025-06-04 10:15:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:15:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:15:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:15:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:15:30] 2.11.2.0 2201 32943 89648 146772 0 111 22677056 25165825 3906 130560 0 16849313 99.793 19222505 2214 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:15:30] CVMFS is ok
[2025-06-04 10:15:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:15:30] Checking for apptainer binary...
[2025-06-04 10:15:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:15:30] Running /usr/bin/apptainer --version
[2025-06-04 10:15:30] apptainer version 1.3.2-1.el7
[2025-06-04 10:15:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:26:16] cg-vwn381.simple-grid.lan
[2025-06-04 10:26:16] apptainer works
[2025-06-04 10:26:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:26:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:26:16] Starting ATLAS job with PandaID=6678014800
[2025-06-04 10:26:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:31:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:31:29] 2025-06-04 12:40:09,562 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-6678014800/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:31:29] 2025-06-04 12:40:09,563 | INFO     | extracted standard info from prmon json
[2025-06-04 17:31:29] 2025-06-04 12:40:09,563 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:31:29] 2025-06-04 12:40:09,563 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:31:29] 2025-06-04 12:40:09,564 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:31:29] 2025-06-04 12:40:09,564 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:31:29] 2025-06-04 12:40:09,569 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:31:29] 2025-06-04 12:40:09,570 | INFO     | sum of square deviations: 4127772278.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,572 | INFO     | sum of deviations: 50041125642.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,572 | INFO     | mean x: 1749033489.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,572 | INFO     | mean y: 2460738.1434599156
[2025-06-04 17:31:29] 2025-06-04 12:40:09,573 | INFO     | -- intersect: -21201132551.533318
[2025-06-04 17:31:29] 2025-06-04 12:40:09,573 | INFO     | intersect: -21201132551.533318
[2025-06-04 17:31:29] 2025-06-04 12:40:09,573 | INFO     | chi2: 5.758290479870522
[2025-06-04 17:31:29] 2025-06-04 12:40:09,574 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,576 | INFO     | sum of deviations: 64634016836.50001
[2025-06-04 17:31:29] 2025-06-04 12:40:09,576 | INFO     | mean x: 1749033336.5
[2025-06-04 17:31:29] 2025-06-04 12:40:09,576 | INFO     | mean y: 2469278.849137931
[2025-06-04 17:31:29] 2025-06-04 12:40:09,576 | INFO     | -- intersect: -29193636230.776386
[2025-06-04 17:31:29] 2025-06-04 12:40:09,576 | INFO     | intersect: -29193636230.776386
[2025-06-04 17:31:29] 2025-06-04 12:40:09,577 | INFO     | chi2: 5.035753599154091
[2025-06-04 17:31:29] 2025-06-04 12:40:09,577 | INFO     | current chi2=5.035753599154091 (change=12.547767140998364 %)
[2025-06-04 17:31:29] 2025-06-04 12:40:09,577 | INFO     | right removable region: 231
[2025-06-04 17:31:29] 2025-06-04 12:40:09,577 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,580 | INFO     | sum of deviations: -27155899998.5
[2025-06-04 17:31:29] 2025-06-04 12:40:09,580 | INFO     | mean x: 1749033641.5
[2025-06-04 17:31:29] 2025-06-04 12:40:09,580 | INFO     | mean y: 2506693.125
[2025-06-04 17:31:29] 2025-06-04 12:40:09,580 | INFO     | -- intersect: 12269215442.309591
[2025-06-04 17:31:29] 2025-06-04 12:40:09,580 | INFO     | intersect: 12269215442.309591
[2025-06-04 17:31:29] 2025-06-04 12:40:09,581 | INFO     | chi2: 1.5818390733594265
[2025-06-04 17:31:29] 2025-06-04 12:40:09,581 | INFO     | current chi2=1.5818390733594265 (change=72.52936303076196 %)
[2025-06-04 17:31:29] 2025-06-04 12:40:09,581 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,583 | INFO     | sum of deviations: -50722294891.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,583 | INFO     | mean x: 1749033794.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,583 | INFO     | mean y: 2521233.9162995596
[2025-06-04 17:31:29] 2025-06-04 12:40:09,584 | INFO     | -- intersect: 24462131235.72241
[2025-06-04 17:31:29] 2025-06-04 12:40:09,584 | INFO     | intersect: 24462131235.72241
[2025-06-04 17:31:29] 2025-06-04 12:40:09,584 | INFO     | chi2: 0.9810600690193094
[2025-06-04 17:31:29] 2025-06-04 12:40:09,584 | INFO     | current chi2=0.9810600690193094 (change=37.97978027336335 %)
[2025-06-04 17:31:29] 2025-06-04 12:40:09,585 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 17:31:29] 2025-06-04 12:40:09,587 | INFO     | sum of deviations: -52190203221.99999
[2025-06-04 17:31:29] 2025-06-04 12:40:09,587 | INFO     | mean x: 1749033946.5
[2025-06-04 17:31:29] 2025-06-04 12:40:09,587 | INFO     | mean y: 2522166.4864864866
[2025-06-04 17:31:29] 2025-06-04 12:40:09,587 | INFO     | -- intersect: 26909114049.806057
[2025-06-04 17:31:29] 2025-06-04 12:40:09,587 | INFO     | intersect: 26909114049.806057
[2025-06-04 17:31:29] 2025-06-04 12:40:09,588 | INFO     | chi2: 0.9605845733462615
[2025-06-04 17:31:29] 2025-06-04 12:40:09,588 | INFO     | current chi2=0.9605845733462615 (change=2.0870786937150285 %)
[2025-06-04 17:31:29] 2025-06-04 12:40:09,588 | INFO     | left removable region: 30
[2025-06-04 17:31:29] 2025-06-04 12:40:09,588 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,590 | INFO     | sum of deviations: -14765747413.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,590 | INFO     | mean x: 1749034221.0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,590 | INFO     | mean y: 2516549.4925373136
[2025-06-04 17:31:29] 2025-06-04 12:40:09,590 | INFO     | -- intersect: 10258986106.462564
[2025-06-04 17:31:29] 2025-06-04 12:40:09,590 | INFO     | intersect: 10258986106.462564
[2025-06-04 17:31:29] 2025-06-04 12:40:09,591 | INFO     | chi2: 0.10970220973859095
[2025-06-04 17:31:29] 2025-06-04 12:40:09,591 | INFO     | -- intersect: 10258986106.462564
[2025-06-04 17:31:29] 2025-06-04 12:40:09,591 | INFO     | current memory leak: -5.86 B/s (using 201 data points, chi2=0.11)
[2025-06-04 17:31:29] 2025-06-04 12:40:09,592 | INFO     | ..............................
[2025-06-04 17:31:29] 2025-06-04 12:40:09,592 | INFO     | . Timing measurements:
[2025-06-04 17:31:29] 2025-06-04 12:40:09,592 | INFO     | . get job = 0 s
[2025-06-04 17:31:29] 2025-06-04 12:40:09,592 | INFO     | . initial setup = 10 s
[2025-06-04 17:31:29] 2025-06-04 12:40:09,593 | INFO     | . payload setup = 166 s
[2025-06-04 17:31:29] 2025-06-04 12:40:09,593 | INFO     | . stage-in = 0 s
[2025-06-04 17:31:29] 2025-06-04 12:40:09,593 | INFO     | . payload execution = 14578 s
[2025-06-04 17:31:29] 2025-06-04 12:40:09,593 | INFO     | . stage-out = 3 s
[2025-06-04 17:31:29] 2025-06-04 12:40:09,593 | INFO     | . log creation = 1 s
[2025-06-04 17:31:29] 2025-06-04 12:40:09,593 | INFO     | ..............................
[2025-06-04 17:31:29] 2025-06-04 12:40:09,743 | INFO     | 
[2025-06-04 17:31:29] 2025-06-04 12:40:09,743 | INFO     | job summary report
[2025-06-04 17:31:29] 2025-06-04 12:40:09,743 | INFO     | --------------------------------------------------
[2025-06-04 17:31:29] 2025-06-04 12:40:09,743 | INFO     | PanDA job id: 6678014800
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | task id: 45006595
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | errors: (none)
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | pilot state: finished 
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | transexitcode: 0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | exeerrorcode: 0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | exeerrordiag: 
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | exitcode: 0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | exitmsg: OK
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | cpuconsumptiontime: 52411 s
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | nevents: 400
[2025-06-04 17:31:29] 2025-06-04 12:40:09,744 | INFO     | neventsw: 0
[2025-06-04 17:31:29] 2025-06-04 12:40:09,745 | INFO     | pid: 16667
[2025-06-04 17:31:29] 2025-06-04 12:40:09,745 | INFO     | pgrp: 16667
[2025-06-04 17:31:29] 2025-06-04 12:40:09,745 | INFO     | corecount: 8
[2025-06-04 17:31:29] 2025-06-04 12:40:09,745 | INFO     | event service: False
[2025-06-04 17:31:29] 2025-06-04 12:40:09,745 | INFO     | sizes: {0: 2404356, 1: 2405042, 2: 2405241, 12: 2405241, 23: 2405269, 34: 2405297, 45: 2405453, 55: 2405481, 66: 2405509, 77: 2405537, 88: 2405593, 90: 2406107, 98
[2025-06-04 17:31:29] 2025-06-04 12:40:09,745 | INFO     | --------------------------------------------------
[2025-06-04 17:31:29] 2025-06-04 12:40:09,745 | INFO     | 
[2025-06-04 17:31:29] 2025-06-04 12:40:09,745 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-06-04 17:31:29] 2025-06-04 12:40:10,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,013 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,013 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,013 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,013 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,013 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,013 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,014 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,014 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,014 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,014 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:31:29] 2025-06-04 12:40:10,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:31:29] 2025-06-04 12:40:10,014 | INFO     | job 6678014800 has completed (purged errors)
[2025-06-04 17:31:29] 2025-06-04 12:40:10,014 | INFO     | overall cleanup function is called
[2025-06-04 17:31:29] 2025-06-04 12:40:11,023 | INFO     | --- collectZombieJob: --- 10, [16667]
[2025-06-04 17:31:29] 2025-06-04 12:40:11,023 | INFO     | zombie collector waiting for pid 16667
[2025-06-04 17:31:29] 2025-06-04 12:40:11,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:31:29] 2025-06-04 12:40:11,023 | INFO     | collected zombie processes
[2025-06-04 17:31:29] 2025-06-04 12:40:11,024 | INFO     | will attempt to kill all subprocesses of pid=16667
[2025-06-04 17:31:29] 2025-06-04 12:40:11,137 | INFO     | process IDs to be killed: [16667] (in reverse order)
[2025-06-04 17:31:29] 2025-06-04 12:40:11,878 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:31:29] 2025-06-04 12:40:11,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:31:29] 2025-06-04 12:40:11,882 | INFO     | did not find any defunct processes belonging to 16667
[2025-06-04 17:31:29] 2025-06-04 12:40:11,891 | INFO     | did not find any defunct processes belonging to 16667
[2025-06-04 17:31:29] 2025-06-04 12:40:11,892 | INFO     | ready for new job
[2025-06-04 17:31:29] 2025-06-04 12:40:11,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:31:29] 2025-06-04 12:40:11,894 | INFO     | **************************************
[2025-06-04 17:31:29] 2025-06-04 12:40:11,894 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:31:29] 2025-06-04 12:40:11,894 | INFO     | **************************************
[2025-06-04 17:31:29] 2025-06-04 12:40:11,894 | INFO     | 
[2025-06-04 17:31:29] 2025-06-04 12:40:11,895 | INFO     | pilot is running in a VM
[2025-06-04 17:31:29] 2025-06-04 12:40:11,895 | INFO     | architecture information:
[2025-06-04 17:31:29] 2025-06-04 12:40:11,916 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:31:29] 2025-06-04 12:40:12,246 | INFO     | cat /etc/os-release:
[2025-06-04 17:31:29] NAME="CentOS Linux"
[2025-06-04 17:31:29] VERSION="7 (Core)"
[2025-06-04 17:31:29] ID="centos"
[2025-06-04 17:31:29] ID_LIKE="rhel fedora"
[2025-06-04 17:31:29] VERSION_ID="7"
[2025-06-04 17:31:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:31:29] ANSI_COLOR="0;31"
[2025-06-04 17:31:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:31:29] HOME_URL="https://www.centos.org/"
[2025-06-04 17:31:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:31:29] 
[2025-06-04 17:31:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:31:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:31:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:31:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:31:29] 
[2025-06-04 17:31:29] 2025-06-04 12:40:12,247 | INFO     | **************************************
[2025-06-04 17:31:29] 2025-06-04 12:40:12,750 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-06-04 17:31:29] 2025-06-04 12:40:12,969 | INFO     | sufficient remaining disk space (496496541696 B)
[2025-06-04 17:31:29] 2025-06-04 12:40:12,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:31:29] 2025-06-04 12:40:12,969 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:31:29] 2025-06-04 12:40:12,969 | INFO     | update_server=False
[2025-06-04 17:31:29] 2025-06-04 12:40:12,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:31:29] 2025-06-04 12:40:12,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:31:29] 2025-06-04 12:40:12,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:31:29] 2025-06-04 12:40:12,973 | INFO     | aborting loop
[2025-06-04 17:31:29] 2025-06-04 12:40:13,604 | INFO     | all data control threads have been joined
[2025-06-04 17:31:29] 2025-06-04 12:40:13,619 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:31:29] 2025-06-04 12:40:13,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:31:29] 2025-06-04 12:40:13,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:31:29] 2025-06-04 12:40:13,975 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:13,979 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:14,116 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:14,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:31:29] 2025-06-04 12:40:14,218 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:14,227 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:14,299 | INFO     | all payload control threads have been joined
[2025-06-04 17:31:29] 2025-06-04 12:40:14,395 | INFO     | [job] validate thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:14,472 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:14,610 | INFO     | [data] control thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:14,685 | INFO     | all job control threads have been joined
[2025-06-04 17:31:29] 2025-06-04 12:40:14,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:31:29] 2025-06-04 12:40:14,832 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:14,925 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:14,977 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:15,074 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:15,305 | INFO     | [payload] control thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:15,690 | INFO     | [job] control thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:15,768 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:18,153 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:31:29] 2025-06-04 12:40:19,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027424532288)>', '<ExcThread(monitor, started 140026981631744)>']
[2025-06-04 17:31:29] 2025-06-04 12:40:19,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:31:29] 2025-06-04 12:40:19,655 | INFO     | [monitor] control thread has ended
[2025-06-04 17:31:29] 2025-06-04 12:40:24,393 | INFO     | all workflow threads have been joined
[2025-06-04 17:31:29] 2025-06-04 12:40:24,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:31:29] 2025-06-04 12:40:24,394 | INFO     | traces error code: 0
[2025-06-04 17:31:29] 2025-06-04 12:40:24,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:31:29] 2025-06-04 12:40:24,840 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:31:29] 2025-06-04 12:40:24,926 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:31:29] 2025-06-04 12:40:25,016 [wrapper] pilotpid: 6066
[2025-06-04 17:31:29] 2025-06-04 12:40:25,125 [wrapper] Pilot exit status: 0
[2025-06-04 17:31:29] 2025-06-04 12:40:25,517 [wrapper] pandaids: 6678014800
[2025-06-04 17:31:29] 2025-06-04 12:40:26,479 [wrapper] cleanup supervisor_pilot 21200 6067
[2025-06-04 17:31:29] 2025-06-04 12:40:26,517 [wrapper] Test setup, not cleaning
[2025-06-04 17:31:29] 2025-06-04 12:40:26,622 [wrapper] apfmon messages muted
[2025-06-04 17:31:29] 2025-06-04 12:40:26,698 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:31:29] 2025-06-04 12:40:26,820 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:31:29]  *** Error codes and diagnostics ***
[2025-06-04 17:31:29]     "exeErrorCode": 0,
[2025-06-04 17:31:29]     "exeErrorDiag": "",
[2025-06-04 17:31:29]     "pilotErrorCode": 0,
[2025-06-04 17:31:29]     "pilotErrorDiag": "",
[2025-06-04 17:31:29]  *** Listing of results directory ***
[2025-06-04 17:31:29] total 397368
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:02 queuedata.json
[2025-06-04 17:31:29] -rwx------. 1 boinc boinc     37140 Jun  3 22:03 runpilot2-wrapper.sh
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:31:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:15 run_atlas
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:15 job.xml
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc      6392 Jun  4 10:15 init_data.xml
[2025-06-04 17:31:29] -rw-r--r--. 2 boinc boinc 213886230 Jun  4 10:15 EVNT.45006593._001779.pool.root.1
[2025-06-04 17:31:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:15 start_atlas.sh
[2025-06-04 17:31:29] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:15 shared
[2025-06-04 17:31:29] -rw-r--r--. 2 boinc boinc    508874 Jun  4 10:15 input.tar.gz
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:15 boinc_lockfile
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:26 pandaJob.out
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc    986774 Jun  4 10:29 agis_schedconf.cvmfs.json
[2025-06-04 17:31:29] drwx------. 4 boinc boinc      4096 Jun  4 10:29 pilot3
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc 185881952 Jun  4 14:37 HITS.45006595._044395.pool.root.1
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:37 boinc_task_state.xml
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc      1017 Jun  4 14:38 memory_monitor_summary.json
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc   1598969 Jun  4 14:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc    381796 Jun  4 14:38 log.45006595._044395.job.log.tgz.1
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc        95 Jun  4 14:39 pilot_heartbeat.json
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc      7691 Jun  4 14:40 heartbeat.json
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc      4417 Jun  4 14:40 pilotlog.txt
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc   1280189 Jun  4 14:40 log.45006595._044395.job.log.1
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc       357 Jun  4 14:40 output.list
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:40 runtime_log
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc   1679360 Jun  4 14:40 result.tar.gz
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc      8673 Jun  4 14:40 runtime_log.err
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc       657 Jun  4 14:40 EXRNDmz1mg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnylKDmYujC4n.diag
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc      8192 Jun  4 17:31 boinc_mmap_file
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc        28 Jun  4 17:31 wrapper_checkpoint.txt
[2025-06-04 17:31:29] -rw-r--r--. 1 boinc boinc     20464 Jun  4 17:31 stderr.txt
[2025-06-04 17:31:29] HITS file was successfully produced:
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc 185881952 Jun  4 14:37 shared/HITS.pool.root.1
[2025-06-04 17:31:29]  *** Contents of shared directory: ***
[2025-06-04 17:31:29] total 392560
[2025-06-04 17:31:29] -rw-r--r--. 2 boinc boinc 213886230 Jun  4 10:15 ATLAS.root_0
[2025-06-04 17:31:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:15 start_atlas.sh
[2025-06-04 17:31:29] -rw-r--r--. 2 boinc boinc    508874 Jun  4 10:15 input.tar.gz
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc 185881952 Jun  4 14:37 HITS.pool.root.1
[2025-06-04 17:31:29] -rw-------. 1 boinc boinc   1679360 Jun  4 14:40 result.tar.gz
17:31:31 (28603): run_atlas exited; CPU time 52623.981719
17:31:31 (28603): called boinc_finish(0)

</stderr_txt>
]]>

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